Ruichen Rong

Also affiliated with The University of Texas Southwestern Medical Center

Computer ScienceMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Data from Computational Staining of Pathology Images to Study the Tumor Microenvironment in Lung Cancer

(2023)10.1158/0008-5472.c.6511499.v1

Top 100%

0DataRank

Top 100%0 citations

Ruichen Rong, Donghan M. Yang, Junya Fujimoto, Shirley Yan, Ling Cai +11 more

Papers

Driven by 25 papers — median percentile 0. Top paper: “MB-GAN: Microbiome Simulation via Generative Adversarial Network”.

MB-GAN: Microbiome Simulation via Generative Adversarial Network

GigaScience(2021)10.1093/gigascience/giab005

N/A

0DataRank · unranked

49 citations

Shuang Jiang, Lin Xu, Guanghua Xiao, Yang Xie, Dajiang J. Liu +3 more

Deep Learning of Rhabdomyosarcoma Pathology Images for Classification and Survival Outcome Prediction

American Journal Of Pathology(2022)10.1016/j.ajpath.2022.03.011

N/A

0DataRank · unranked

34 citations

Shidan Wang, Erin R. Rudzinski, Saloni Agarwal, Ruichen Rong, Donald A. Barkauskas +7 more

A Deep Learning Approach for Histology-Based Nuclei Segmentation and Tumor Microenvironment Characterization

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.08.519641

N/A

0DataRank · unranked

2 citations

Hudanyun Sheng, Kevin W. Jin, Fangjiang Wu, Danni Luo, Zhuoyu Wen +10 more

Image-based quantification of histological features as a function of spatial location using the Tissue Positioning System

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.12.511979

N/A

0DataRank · unranked

0 citations

Ruichen Rong, Yonglong Wei, Tao Wang, Guanghua Xiao, Hao Zhu +1 more

Deep Learning–Based H-Score Quantification of Immunohistochemistry-Stained Images

Modern Pathology(2023)10.1016/j.modpat.2023.100398

N/A

0DataRank · unranked

92 citations

Danni Luo, Shidan Wang, Ruichen Rong, Bret M. Evers, Liwei Jia +16 more

A Deep Learning Approach for Histology-Based Nucleus Segmentation and Tumor Microenvironment Characterization

Modern Pathology(2023)10.1016/j.modpat.2023.100196

N/A

0DataRank · unranked

72 citations

Hudanyun Sheng, Kevin W. Jin, Fangjiang Wu, Danni Luo, Zhuoyu Wen +10 more

Deep learning of cell spatial organizations identifies clinically relevant insights in tissue images

Nature Communications(2023)10.1038/s41467-023-43172-8

N/A

0DataRank · unranked

41 citations

Ruichen Rong, Qin Zhou, Donghan M. Yang, Xinyi Zhang, Xiaowei Zhan +10 more

Enhanced Pathology Image Quality with Restore–Generative Adversarial Network

American Journal Of Pathology(2023)10.1016/j.ajpath.2022.12.011

N/A

0DataRank · unranked

29 citations

Shidan Wang, Xinyi Zhang, Zhuoyu Wen, Xian Wu Cheng, Liwei Jia +5 more

Features of tumor-microenvironment images predict targeted therapy survival benefit in patients with EGFR-mutant lung cancer

Journal of Clinical Investigation(2023)10.1172/jci160330

N/A

0DataRank · unranked

21 citations

Ruichen Rong, Donghan M. Yang, Junya Fujimoto, Justin A. Bishop, Shirley Yan +15 more

Unsupervised domain adaptation for nuclei segmentation: Adapting from hematoxylin & eosin stained slides to immunohistochemistry stained slides using a curriculum approach

Computer Methods and Programs in Biomedicine(2023)10.1016/j.cmpb.2023.107768

N/A

0DataRank · unranked

12 citations

Ruichen Rong, Zifan Gu, Junya Fujimoto, Xiaowei Zhan, Yang Xie +2 more

Image-based quantification of histological features as a function of spatial location using the Tissue Positioning System

EBioMedicine(2023)10.1016/j.ebiom.2023.104698

N/A

0DataRank · unranked

5 citations

Yonglong Wei, Linfeng Li, Tao Wang, Hao Zhu, Guanghua Xiao +2 more

Deep-Learning-Based Hepatic Ploidy Quantification Using H&E Histopathology Images

Genes(2023)10.3390/genes14040921

N/A

0DataRank · unranked

5 citations

Yu-Hsuan Lin, Shidan Wang, Naoto Fujiwara, Ruichen Rong, Kevin W. Jin +9 more

Data from Computational Staining of Pathology Images to Study the Tumor Microenvironment in Lung Cancer

(2023)10.1158/0008-5472.c.6511499.v1

Top 100%

0DataRank

Top 100%0 citations

Ruichen Rong, Donghan M. Yang, Junya Fujimoto, Shirley Yan, Ling Cai +11 more

Deep Learning of Cell Spatial Organizations Identifies Clinically Relevant Insights in Tissue Images

Research Square(2023)10.21203/rs.3.rs-2928838/v1

N/A

0DataRank · unranked

0 citations

Shidan Wang, Ruichen Rong, Donghan M. Yang, Xinyi Zhang, Xiaowei Zhan +8 more

ScopeViewer: A Browser-Based Solution for Visualizing Spatial Transcriptomics Data

Tiempo de paz(2023)10.1101/2023.07.24.549256

N/A

0DataRank · unranked

0 citations

Sophie Robertson, Yuanchun Zhan, Ruichen Rong, Shidan Wang, Xi Jiang +7 more

A critical assessment of using ChatGPT for extracting structured data from clinical notes

npj Digital Medicine(2024)10.1038/s41746-024-01079-8

N/A

0DataRank · unranked

250 citations

Donghan M. Yang, Ruichen Rong, Kuroush Nezafati, Colin Treager, Zhikai Chi +9 more

Cell Segmentation With Globally Optimized Boundaries (CSGO): A Deep Learning Pipeline for Whole-Cell Segmentation in Hematoxylin-and-Eosin–Stained Tissues

Laboratory Investigation(2024)10.1016/j.labinv.2024.102184

N/A

0DataRank · unranked

10 citations

Shidan Wang, Ruichen Rong, Zhuo Zhao, Fangjiang Wu, Qin Zhou +11 more

BayeSMART: Bayesian clustering of multi-sample spatially resolved transcriptomics data

Briefings in Bioinformatics(2024)10.1093/bib/bbae524

N/A

0DataRank · unranked

7 citations

Bencong Zhu, Chen Tang, Ruichen Rong, Ying Ma, Guanghua Xiao +3 more

Enhancing Medical Imaging Segmentation with GB-SAM: A Novel Approach to Tissue Segmentation Using Granular Box Prompts

Cancers(2024)10.3390/cancers16132391

N/A

0DataRank · unranked

5 citations

Ruichen Rong, Peiran Quan, Zhuoyu Wen, Xiaowei Zhan, Donghan M. Yang +4 more

Assessing disease severity in cutaneous lupus patients using natural language processing: Preliminary data from a cohort study

Journal of the American Academy of Dermatology(2024)10.1016/j.jaad.2024.10.105

N/A

0DataRank · unranked

3 citations

Laura Wang, Ruichen Rong, Andrew J. Park, Jane Zhu, Guanghua Xiao +4 more

Deep Learning-Based Automated Measurement of Murine Bone Length in Radiographs

Bioengineering(2024)10.3390/bioengineering11070670

N/A

0DataRank · unranked

1 citations

Kristin Denton, Kevin W. Jin, Peiran Quan, Zhuoyu Wen, Julia Kozlitina +9 more

Multi-Agent LLMs Ensemble for Efficient Atrial Fibrillation Annotation of ECG Reports

arXiv (Cornell University)(2024)10.48550/arxiv.2410.16543

N/A

0DataRank · unranked

0 citations

Kuroush Nezafati, Ismael Villanueva-Miranda, Zifan Gu, Xu, Yueshuang, Ann Marie Návar +11 more

A deep learning model for clinical outcome prediction using longitudinal inpatient electronic health records

JAMIA Open(2025)10.1093/jamiaopen/ooaf026

N/A

0DataRank · unranked

12 citations

Zifan Gu, Hongyin Lai, Tanna L. Nelson, Tony Keller, Clark Walker +9 more

Image-based inference of tumor cell trajectories enables large-scale cancer progression analysis

Science Advances(2025)10.1126/sciadv.adv9466

N/A

0DataRank · unranked

5 citations

Ling Cai, Ruichen Rong, Shidan Wang, Liwei Jia, Peiran Quan +4 more

A deep learning model for clinical outcome prediction using longitudinal inpatient electronic health records

medRxiv(2025)10.1101/2025.01.21.25320916

N/A

0DataRank · unranked

2 citations

Zifan Gu, Hongyin Lai, Tanna L. Nelson, Tony Keller, Clark Walker +9 more

Ruichen Rong

Indexed papers

Top data-sharing exemplar

Papers