Ümit Topaloĝlu

Also affiliated with Wake Forest University

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

5.4Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Risk and Outcome of Breakthrough COVID-19 Infections in Vaccinated Patients With Cancer: Real-World Evidence From the National COVID Cohort Collaborative

Journal of Clinical Oncology(2022)10.1200/jco.21.02419

Top 5%

4.6DataRank

Top 5%111 citations

Benjamin Bates, Yu Raymond Shao, Fang‐Chi Hsu, Feifan Liu, Vithal Madhira +8 more

Papers

Driven by 36 papers — median percentile 85. Top paper: “Risk and Outcome of Breakthrough COVID-19 Infections in Vaccinated Patients With Cancer: Real-World Evidence From the National COVID Cohort Collaborative”.

Risk and Outcome of Breakthrough COVID-19 Infections in Vaccinated Patients With Cancer: Real-World Evidence From the National COVID Cohort Collaborative

Journal of Clinical Oncology(2022)10.1200/jco.21.02419

Top 5%

4.6DataRank

Top 5%111 citations

Benjamin Bates, Yu Raymond Shao, Fang‐Chi Hsu, Feifan Liu, Vithal Madhira +8 more

SMARCA4 mutations in KRAS ‐mutant lung adenocarcinoma: a multi‐cohort analysis

Molecular Oncology(2020)10.1002/1878-0261.12831

N/A

2.4DataRank · unranked

59 citations

Tamjeed Ahmed, W. Jeffrey Petty, Stefan C. Grant, Jimmy Ruiz, Thomas Lycan +12 more

NIH HEAL Common Data Elements (CDE) implementation: NIH HEAL Initiative IDEA-CC

Pain Medicine(2023)10.1093/pm/pnad018

Top 25%

0.814DataRank

Top 25%32 citations

Robert W. Hurley, Andrew Siddons, Ümit Topaloĝlu, Laura D. Wandner, ICDEWG +21 more

Characterizing Long COVID: Deep Phenotype of a Complex Condition

eBioMedicine(2021)10.1016/j.ebiom.2021.103722

N/A

0.802DataRank · unranked

209 citations

Nicole A. Vasilevsky, Leigh C Carmody, Diane N. Rafizadeh, Alfred J Anzalone, Marc D. Basson +53 more

Targeting NTRK1 Enhances Immune Checkpoint Inhibitor Efficacy in NTRK1 Wild-Type Non–Small Cell Lung Cancer

Cancer Research(2024)10.1158/0008-5472.can-24-0658

N/A

0.444DataRank · unranked

11 citations

Caroline B. Dixon, Yuezhu Wang, Yin Liu, Ralph B. D’Agostino, Jimmy Ruiz +15 more

Characterizing Long COVID: Deep Phenotype of a Complex Condition

medRxiv(2021)10.1101/2021.06.23.21259416

N/A

0.165DataRank · unranked

2 citations

Madeline A Rock, Nicole A. Vasilevsky, Leigh C Carmody, Diane N. Rafizadeh, Alfred J Anzalone +53 more

Challenges in defining Long COVID: Striking differences across literature, Electronic Health Records, and patient-reported information

medRxiv(2021)10.1101/2021.03.20.21253896

N/A

0DataRank · unranked

142 citations

Tellen D. Bennett, James Brian Byrd, Carolyn T. Bramante, Tiffany J. Callahan, Christopher G. Chute +17 more

A transformer-based deep learning approach for classifying brain metastases into primary organ sites using clinical whole brain MRI

arXiv (Cornell University)(2021)10.48550/arxiv.2110.03588

N/A

0DataRank · unranked

0 citations

Sanjeev V. Namjoshi, E. McTyre, Ümit Topaloĝlu, Richard A. Barcus, Michael D. Chan +15 more

RETRACTED ARTICLE: Exosomal miR-4466 from nicotine-activated neutrophils promotes tumor cell stemness and metabolism in lung cancer metastasis

Oncogene(2022)10.1038/s41388-022-02322-w

N/A

0DataRank · unranked

74 citations

Shih-Ying Wu, Sambad Sharma, Kerui Wu, Dan Zhao, Ravindra Pramod Deshpande +6 more

A transformer-based deep-learning approach for classifying brain metastases into primary organ sites using clinical whole-brain MRI images

Patterns(2022)10.1016/j.patter.2022.100613

N/A

0DataRank · unranked

43 citations

Sanjeev V. Namjoshi, E. McTyre, Ümit Topaloĝlu, Richard A. Barcus, Michael D. Chan +15 more

Guiding principles for technical infrastructure to support computable biomedical knowledge

Learning Health Systems(2022)10.1002/lrh2.10352

N/A

0DataRank · unranked

4 citations

Leslie D. McIntosh, Chris Shaffer, Peter Boisvert, J. M. Ryan, Vivek Navale +3 more

Adaptation of a Personalized Electronic Care Planning Tool for Cancer Follow-up Care: Formative Study

JMIR Formative Research(2022)10.2196/41354

N/A

0DataRank · unranked

2 citations

Pamela W. Duncan, Elyse Thakur, Nicole Puccinelli‐Ortega, John M. Salsman, Gregory B. Russell +6 more

Association between an electronic health record (EHR)–embedded frailty index and survival among older adults receiving cancer chemotherapy.

Journal of Clinical Oncology(2022)10.1200/jco.2022.40.16_suppl.12009

N/A

0DataRank · unranked

8 citations

Scott Isom, Katherine E. Callahan, Nicholas M. Pajewski, Ümit Topaloĝlu, Lynne I. Wagner +5 more

Rural disparities in oncology patient portal enrollment and use.

Journal of Clinical Oncology(2022)10.1200/jco.2022.40.16_suppl.6557

N/A

0DataRank · unranked

3 citations

Ümit Topaloĝlu, Glenn J. Lesser, Roy E. Strowd, Kathryn E. Weaver, Derek Falk +2 more

Long COVID-19 in patients with cancer: Report from the National COVID Cohort Collaborative (N3C).

Journal of Clinical Oncology(2022)10.1200/jco.2022.40.16_suppl.1540

N/A

0DataRank · unranked

3 citations

Vithal Madhira, Qianqian Song, Benjamin Bates, Amit Mitra, Feifan Liu +5 more

Variations in patient portal enrollment and use by cancer site.

Journal of Clinical Oncology(2022)10.1200/jco.2022.40.16_suppl.e14013

N/A

0DataRank · unranked

0 citations

Ümit Topaloĝlu, Ronny A. Bell, Roy E. Strowd, Kathryn E. Weaver, Derek Falk +2 more

An open natural language processing (NLP) framework for EHR-based clinical research: a case demonstration using the National COVID Cohort Collaborative (N3C)

Journal of the American Medical Informatics Association(2023)10.1093/jamia/ocad134

N/A

0DataRank · unranked

26 citations

Andrew Wen, Liwei Wang, Huan He, Sunyang Fu, Robert Miller +23 more

Prognostic Mutational Signatures of NSCLC Patients treated with chemotherapy, immunotherapy and chemoimmunotherapy

npj Precision Oncology(2023)10.1038/s41698-023-00373-0

N/A

0DataRank · unranked

18 citations

Yuezhu Wang, Ralph B. D’Agostino, Yin Liu, Jimmy Ruiz, Thomas Lycan +11 more

Michigan body map: connecting the NIH HEAL IMPOWR network to the HEAL ecosystem

Pain Medicine(2023)10.1093/pm/pnad028

N/A

0DataRank · unranked

13 citations

Chad M. Brummett, Laura D. Wandner, Ümit Topaloĝlu, Robert W. Hurley, Meredith C B Adams

Transfer Learning Approach to Vascular Permeability Changes in Brain Metastasis Post-Whole-Brain Radiotherapy

Cancers(2023)10.3390/cancers15102703

N/A

0DataRank · unranked

11 citations

William Crowe, Lulu Wang, J. Daniel Bourland, Ümit Topaloĝlu, Amyn A. Habib +2 more

Modulation of oxidative phosphorylation and mitochondrial biogenesis by cigarette smoke influence the response to immune therapy in NSCLC patients

Lung Cancer(2023)10.1016/j.lungcan.2023.01.016

N/A

0DataRank · unranked

7 citations

Margaret Smith, Jimmy Ruiz, Yin Liu, Gregory L. Kucera, Ümit Topaloĝlu +5 more

Frailty status determined by an electronic health record embedded frailty index and hospitalization risk among older adults following the initiation of cancer chemotherapy.

Journal of Clinical Oncology(2023)10.1200/jco.2023.41.16_suppl.12010

N/A

0DataRank · unranked

7 citations

Scott Isom, Kathryn E. Callahan, Nicholas M. Pajewski, Ümit Topaloĝlu, Lynne I. Wagner +5 more

Cancer Informatics for Cancer Centers: Sharing Ideas on How to Build an Artificial Intelligence–Ready Informatics Ecosystem for Radiation Oncology

JCO Clinical Cancer Informatics(2023)10.1200/cci.23.00136

N/A

0DataRank · unranked

1 citations

Michael F. Gensheimer, David A. Jaffray, Daniel A. Pryma, Steve Jiang, Olivier Morin +22 more

Improving Equity in Deep Learning Medical Applications with the Gerchberg-Saxton Algorithm

(2023)10.1109/ichi57859.2023.00123

N/A

0DataRank · unranked

1 citations

Michael Cardei, Anne‐Marie Meyer, Wei Zhang, Ümit Topaloĝlu, Seha Ay

Adapting the open-source Gen3 platform and kubernetes for the NIH HEAL IMPOWR and MIRHIQL clinical trial data commons: Customization, cloud transition, and optimization

Journal of Biomedical Informatics(2024)10.1016/j.jbi.2024.104749

N/A

0DataRank · unranked

4 citations

Colin Griffin, Hunter Adams, Stephen H. Bryant, Robert W. Hurley, Ümit Topaloĝlu +1 more

Mutations Associated With High-Grade irAEs in NSCLC Patients Receiving Immunotherapies

Clinical Lung Cancer(2024)10.1016/j.cllc.2024.07.003

N/A

0DataRank · unranked

0 citations

Yuezhu Wang, Caroline B. Dixon, Ralph B. D’Agostino, Yin Liu, Jimmy Ruiz +12 more

Breaking Digital Health Barriers Through a Large Language Model–Based Tool for Automated Observational Medical Outcomes Partnership Mapping: Development and Validation Study

Journal of Medical Internet Research(2025)10.2196/69004

N/A

0DataRank · unranked

7 citations

Matthew W. Perkins, Cody Hudson, Vithal Madhira, Oğuz Akbilgiç, Da Ma +3 more

Leveraging the Rural-Urban Commuting Area Tool to Address Geographic Disparities in Cancer Care: A Dual-Application Framework for Institutional and National Initiatives

JCO Clinical Cancer Informatics(2025)10.1200/cci-25-00122

N/A

0DataRank · unranked

1 citations

Cody Hudson, Matthew W. Perkins, Robert W. Hurley, Ümit Topaloĝlu, Meredith C B Adams

Automated multi-instance REDCap data synchronization for NIH clinical trial networks

JAMIA Open(2025)10.1093/jamiaopen/ooaf036

N/A

0DataRank · unranked

0 citations

Cody Hudson, Wanchi Chen, Robert W. Hurley, Ümit Topaloĝlu, Meredith C B Adams

Enhancing Gen3 for clinical trial time series analytics and data discovery: a data commons framework for NIH clinical trials

Frontiers in Digital Health(2025)10.3389/fdgth.2025.1570009

N/A

0DataRank · unranked

0 citations

Colin Griffin, Hunter Adams, Stephen H. Bryant, Robert W. Hurley, Ümit Topaloĝlu +1 more

An open natural language processing (NLP) framework for EHR-based clinical research: a case demonstration using the National COVID Cohort Collaborative (N3C)

UNC Libraries(2025)10.17615/wb8c-t328

N/A

0DataRank · unranked

0 citations

Timothy Q. Duong, Hua Xu, Daniel R. Harris, Melissa A Haendel, Rafael Fuentes +23 more

Workflow Differences Affect Data Accuracy in Oncologic EHRs: A First Step Toward Detangling the Diagnosis Data Babel

JCO Clinical Cancer Informatics(2020)10.1200/cci.19.00114

N/A

0DataRank · unranked

19 citations

Roy E. Strowd, Virginia Lawson, María E. Mayorga, Brian J. Wells, Thomas Lycan +2 more

Cloud-Based Federated Learning Implementation Across Medical Centers

JCO Clinical Cancer Informatics(2021)10.1200/cci.20.00060

N/A

0DataRank · unranked

74 citations

Jihad S. Obeid, Hamidullah Binol, Ralph B. D’Agostino, Kristie L. Foley, Wei Zhang +5 more

In the Pursuit of Privacy: The Promises and Predicaments of Federated Learning in Healthcare

Frontiers in Artificial Intelligence(2021)10.3389/frai.2021.746497

N/A

0DataRank · unranked

47 citations

Elisabeth M. Morrell, Suraj Rajendran, Ümit Topaloĝlu, Mustafa Y. Topaloglu

Relationship between Tumor Mutational Burden, PD-L1, Patient Characteristics, and Response to Immune Checkpoint Inhibitors in Head and Neck Squamous Cell Carcinoma

Cancers(2021)10.3390/cancers13225733

N/A

0DataRank · unranked

35 citations

Jeffrey Lantz, Elena Gavrila, Arianne Abreu, Jack T. Burcher, Andrew T. Faucheux +12 more

Evaluating Site-Level Implementations of the HL7 FHIR Standard to Support eSource Data Exchange in Clinical Research

Studies in health technology and informatics(2021)10.3233/shti210188

N/A

0DataRank · unranked

17 citations

Michael Rutherford, Bhargav Adagarla, Eric L. Eisenstein, Karan R. Kumar, Kanecia O. Zimmerman +3 more

Ümit Topaloĝlu

Indexed papers

Top data-sharing exemplar

Papers