Jeffrey H. Chuang

Also affiliated with The Jackson Laboratory for Genomic Medicine, UConn Health

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

4.2Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A human breast cancer-derived xenograft and organoid platform for drug discovery and precision oncology

Nature Cancer(2022)10.1038/s43018-022-00337-6

Top 6%

3.9DataRank

Top 6%400 citations

Maihi Fujita, Andrew Butterfield, Sandra D. Scherer, Matthew H. Bailey, Zhengtao Chu +37 more

Papers

Driven by 35 papers — median percentile 33. Top paper: “A human breast cancer-derived xenograft and organoid platform for drug discovery and precision oncology”.

A human breast cancer-derived xenograft and organoid platform for drug discovery and precision oncology

Nature Cancer(2022)10.1038/s43018-022-00337-6

Top 6%

3.9DataRank

Top 6%400 citations

Maihi Fujita, Andrew Butterfield, Sandra D. Scherer, Matthew H. Bailey, Zhengtao Chu +37 more

Conservation of copy number profiles during engraftment and passaging of patient-derived cancer xenografts

Nature Genetics(2021)10.1038/s41588-020-00750-6

N/A

0.790DataRank · unranked

193 citations

Jessica Giordano, Anuj Srivastava, Min Jin Ha, Michael W. Lloyd, Roebi de Bruijn +57 more

Dynamic simulation of cardiolipin remodeling: greasing the wheels for an interpretative approach to lipidomics

Journal of Lipid Research(2010)10.1194/jlr.m004796

N/A

0.633DataRank · unranked

67 citations

Rob Bell, Kui Yang, Toan Phan, Zhongdan Zhao, William Ames +5 more

Comprehensive single-cell aging atlas of healthy mammary tissues reveals shared epigenomic and transcriptomic signatures of aging and cancer

Nature Aging(2024)10.1038/s43587-024-00751-8

N/A

0.574DataRank · unranked

45 citations

Siddhartha Sharma, Neerja Katiyar, Hyeon Gu Kang, Djamel Nehar-Belaid, Sung‐Hee Park +9 more

Regulated dicing of pre-mir-144 via reshaping of its terminal loop

Nucleic Acids Research(2022)10.1093/nar/gkac568

N/A

0.556DataRank · unranked

17 citations

Dmitry A. Kretov, Scott I. Adamson, Thomas Treiber, Nora Treiber, Jeffrey Vedanayagam +5 more

A Pan-Cancer Patient-Derived Xenograft Histology Image Repository with Genomic and Pathologic Annotations Enables Deep Learning Analysis

Cancer Research(2024)10.1158/0008-5472.can-23-1349

Top 62%

0.222DataRank

Top 62%3 citations

Xing Yi Woo, Soner Koc, Todd Sheridan, Steven B. Neuhauser, Shidan Wang +49 more

PDXNet Portal: Patient-Derived Xenograft model, data, workflow, and tool discovery

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.15.464537

Top 72%

0.110DataRank

Top 72%1 citations

Michael W. Lloyd, Jeffrey Grover, Sara Seepo, Sai Lakshmi Subramanian, Manisha Ray +34 more

Development and application of genetic ancestry reconstruction methods to study diversity of patient-derived models in the NCI PDXNet Consortium

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.24.513591

N/A

0DataRank · unranked

0 citations

Paul C. Lott, Katherine Chiu, Juanita Elizabeth Quino, April Pangia Vang, Michael W. Lloyd +4 more

A pan-cancer PDX histology image repository with genomic and pathological annotations for deep learning analysis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.26.512745

Top 100%

0DataRank

Top 100%0 citations

X. Woo, Soner Koc, Todd Sheridan, Steven B. Neuhauser, Shidan Wang +45 more

Spatial mapping of cellular senescence: emerging challenges and opportunities

Nature Aging(2023)10.1038/s43587-023-00446-6

N/A

0DataRank · unranked

127 citations

Akos A. Gerencser, Ana L. Mora, Andrew C. Nelson, Anru R. Zhang, Anthony B. Lagnado +40 more

High-throughput deconvolution of 3D organoid dynamics at cellular resolution for cancer pharmacology with Cellos

Nature Communications(2023)10.1038/s41467-023-44162-6

N/A

0DataRank · unranked

35 citations

Pooja Kumar, David J. Mellert, Shadae Nicholas, Javad Noorbakhsh, Mattia Brugiolo +5 more

Integrative deep learning analysis improves colon adenocarcinoma patient stratification at risk for mortality

EBioMedicine(2023)10.1016/j.ebiom.2023.104726

N/A

0DataRank · unranked

34 citations

Ali Foroughi pour, Hany Deirawan, Fayez Daaboul, Thazin Nwe Aung, Rafic Beydoun +3 more

Challenges and opportunities for modeling aging and cancer

Cancer Cell(2023)10.1016/j.ccell.2023.03.006

N/A

0DataRank · unranked

24 citations

Susie Airhart, Jeffrey H. Chuang, Lisa M. Coussens, George A. Kuchel, Ron Korstanje +11 more

Deep learning-based cross-classifications reveal conserved spatial behaviors within tumor histological images

Nature Communications(2020)10.1038/s41467-020-20030-5

N/A

0DataRank · unranked

205 citations

Saman Farahmand, Ali Foroughi pour, Sandeep Namburi, Dennis L. Caruana, David L. Rimm +4 more

Computational immune synapse analysis reveals T-cell interactions in distinct tumor microenvironments

Research Square(2023)10.21203/rs.3.rs-2968528/v1

N/A

0DataRank · unranked

2 citations

Zichao Liu, Jan Martínek, Jie Zhou, Hannah Boruchov, Kelly Ray +3 more

Comprehensive single cell aging atlas of mammary tissues reveals shared epigenomic and transcriptomic signatures of aging and cancer

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.20.563147

N/A

0DataRank · unranked

2 citations

Siddhartha Sharma, Neerja Katiyar, Hyeon Gu Kang, Djamel Nehar-Belaid, Sung‐Hee Park +9 more

Cellos : High-throughput deconvolution of 3D organoid dynamics at cellular resolution for cancer pharmacology

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.03.531019

N/A

0DataRank · unranked

1 citations

Pooja Kumar, David J. Mellert, Shadae Nicholas, Javad Noorbakhsh, Mattia Brugiolo +4 more

Data from Cancer Stem Cells, not Bulk Tumor Cells, Determine Mechanisms of Resistance to SMO Inhibitors

(2023)10.1158/2767-9764.c.6550640.v1

N/A

0DataRank · unranked

0 citations

Yaohui Chen, Nourhan Abdelfattah, Keiko Yamamoto, Thomas D. Gallup, Scott I. Adamson +14 more

Spatiotemporal Profiling Defines Persistence and Resistance Dynamics during Targeted Treatment of Melanoma

Cancer Research(2024)10.1158/0008-5472.can-24-0690

N/A

0DataRank · unranked

11 citations

Sergii Domanskyi, Todd Sheridan, Brian J. Sanderson, SungHee Park, Jessica Kaster +5 more

Assessment of Patient-Derived Xenograft Growth and Antitumor Activity: The NCI PDXNet Consensus Recommendations

Molecular Cancer Therapeutics(2024)10.1158/1535-7163.mct-23-0471

N/A

0DataRank · unranked

21 citations

Michael W. Lloyd, Soner Koc, Yvonne A. Evrard, Lisa M. McShane, Michael T. Lewis +29 more

Computational immune synapse analysis reveals T-cell interactions in distinct tumor microenvironments

Communications Biology(2024)10.1038/s42003-024-06902-2

N/A

0DataRank · unranked

10 citations

Zichao Liu, Jan Martínek, Ali Foroughi pour, Jie Zhou, Hannah Boruchov +4 more

STRprofiler: efficient comparisons of short tandem repeat profiles for biomedical model authentication

Bioinformatics(2024)10.1093/bioinformatics/btae713

N/A

0DataRank · unranked

2 citations

Michael W. Lloyd, Steven B. Neuhauser, Margaret Bundy, Emily L. Jocoy, Susan Airhart +5 more

Development and Application of Genetic Ancestry Reconstruction Methods to Study Diversity of Patient-Derived Models in the NCI PDXNet Consortium

Cancer Research Communications(2024)10.1158/2767-9764.crc-23-0417

N/A

0DataRank · unranked

1 citations

Katherine Chiu, Juanita Elizabeth Quino, April Pangia Vang, Michael W. Lloyd, Anuj Srivastava +3 more

Charting heterogeneity and spatial landscape of consensus molecular subtypes in colorectal cancer.

Journal of Clinical Oncology(2024)10.1200/jco.2024.42.16_suppl.e15647

N/A

0DataRank · unranked

0 citations

Todd Sheridan, Sergii Domanskyi, Stephanie L. Cowles, Sung-Hee Park, Ilham Putra +4 more

Emerging AI approaches for cancer spatial omics

GigaScience(2025)10.1093/gigascience/giaf128

N/A

0DataRank · unranked

10 citations

Ali Foroughi pour, Jeffrey H. Chuang, Javad Noorbakhsh

SpliceDecoder: A High-Throughput Tool for Guiding the Functional Interpretation of Differential Splicing Events

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.01.679902

N/A

0DataRank · unranked

2 citations

Marina Yurieva, Mattia Brugiolo, Jeffrey H. Chuang, Olga Anczuków, Hyeon Gu Kang

Prediction of Outcome from Spatial Protein Profiling of Triple-Negative Breast Cancers

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.18.649541

N/A

0DataRank · unranked

1 citations

Te-Chia Wu, Jan Martínek, Santhosh Sivajothi, Paul Robson, Karolina Palucka +2 more

A human and mouse subpopulation of senescent β-cells induces pathologic dysfunction through targetable paracrine signaling

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.07.648438

N/A

0DataRank · unranked

0 citations

Priscila Carapeto, Cristian Abarca, Francesko Hela, Stephanie Sanjines, Sebastian Pena +20 more

SAMPLER: unsupervised representations for rapid analysis of whole slide tissue images

EBioMedicine(2023)10.1016/j.ebiom.2023.104908

N/A

0DataRank · unranked

16 citations

Todd Sheridan, Ali Foroughi pour, Jeffrey H. Chuang, Patience Mukashyaka

Expression of the Neuronal tRNA n-Tr20 Regulates Synaptic Transmission and Seizure Susceptibility

Neuron(2020)10.1016/j.neuron.2020.07.023

N/A

0DataRank · unranked

78 citations

Archan Ganguly, Gábor Nagy, Scott I. Adamson, Jeffrey H. Chuang, Wayne N. Frankel +2 more

The Clp1 R140H mutation alters tRNA metabolism and mRNA 3′ processing in mouse models of pontocerebellar hypoplasia

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2110730118

N/A

0DataRank · unranked

38 citations

Scott I. Adamson, Mridu Kapur, Jeffrey H. Chuang, Susan L. Ackerman, Caitlin E. Monaghan

Human KIT+ myeloid cells facilitate visceral metastasis by melanoma

The Journal of Experimental Medicine(2021)10.1084/jem.20182163

N/A

0DataRank · unranked

8 citations

Jan Martínek, Te-Chia Wu, Kyung In Kim, Joshy George, Elaheh Ahmadzadeh +11 more

A breast cancer patient-derived xenograft and organoid platform for drug discovery and precision oncology

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.28.433268

N/A

0DataRank · unranked

20 citations

Maihi Fujita, Andrew Butterfield, Sandra D. Scherer, Matthew H. Bailey, Zhengtao Chu +37 more

Defects in translation-dependent quality control pathways lead to convergent molecular and neurodevelopmental pathology

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.25.428167

N/A

0DataRank · unranked

0 citations

Scott I. Adamson, Jeffrey H. Chuang, Susan L. Ackerman, Markus Terrey

A path to translation: How 3D patient tumor avatars enable next generation precision oncology

Cancer Cell(2022)10.1016/j.ccell.2022.09.017

N/A

0DataRank · unranked

66 citations

Margarida Barroso, Milan G. Chheda, Hans Clevers, Élena Elez, Salma Kaochar +21 more

Jeffrey H. Chuang

Indexed papers

Top data-sharing exemplar

Papers