Xuesong He

Also affiliated with Somerville Hospital, American Dental Education Association

DentistryBiochemistry, Genetics and Molecular BiologyEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile

0.421Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Culture-based approaches to studying “microbial dark matter”

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2219691120

Top 53%

0.317DataRank

Top 53%4 citations

Xuesong He

Papers

Driven by 32 papers — median percentile 34. Top paper: “Episymbiotic Saccharibacteria suppresses gingival inflammation and bone loss in mice through host bacterial modulation”.

Episymbiotic Saccharibacteria suppresses gingival inflammation and bone loss in mice through host bacterial modulation

Cell Host & Microbe(2021)10.1016/j.chom.2021.09.009

N/A

2.8DataRank · unranked

116 citations

Daniel R. Utter, Joseph K. Bedree, Yansong Ma, Fabian Schulte, Gabrielle Mascarin +9 more

Culture-based approaches to studying “microbial dark matter”

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2219691120

Top 53%

0.317DataRank

Top 53%4 citations

Xuesong He

Complete genome of Nanosynbacter sp. strain BB002, isolated and cultivated from a site of periodontal disease

Microbiology Resource Announcements(2024)10.1128/mra.00637-24

Top 78%

0.104DataRank

Top 78%1 citations

Kristopher A. Kerns, Erik L. Hendrickson, Xuesong He, Batbileg Bor, Jeffrey S. McLean +1 more

Oral Microbiome: Streptococcus mutans/Caries Concordant-Discordant Children

Frontiers in Microbiology(2022)10.3389/fmicb.2022.782825

N/A

0DataRank · unranked

39 citations

Melissa Agnello, Lujia Cen, Bhumika Shokeen, Xuesong He, Wenyuan Shi +4 more

Transcriptome of Epibiont Saccharibacteria Nanosynbacter lyticus Strain TM7x During the Establishment of Symbiosis

Journal of Bacteriology(2022)10.1128/jb.00112-22

N/A

0DataRank · unranked

17 citations

Batbileg Bor, Kristopher A. Kerns, Eleanor I. Lamont, Yunjie Chang, Jun Liu +7 more

Exploitation of a Bacterium-Encoded Lytic Transglycosylase by a Human Oral Lytic Phage To Facilitate Infection

Journal of Virology(2022)10.1128/jvi.01063-22

N/A

0DataRank · unranked

9 citations

Yunjie Chang, Joseph K. Bedree, Yansong Ma, Qiu Zhong, Daniel R. Utter +8 more

Transcriptome of epibiont Saccharibacteria Nanosynbacter lyticus strain TM7x during establishment of symbiosis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.25.485537

N/A

0DataRank · unranked

1 citations

Batbileg Bor, Kristopher A. Kerns, Eleanor I. Lamont, Yunjie Chang, Jun Liu +5 more

The oral microbiome: diversity, biogeography and human health

Nature Reviews Microbiology(2023)10.1038/s41579-023-00963-6

N/A

0DataRank · unranked

574 citations

Jessica L. Mark Welch, Kathryn M. Kauffman, Jeffrey S. McLean, Xuesong He, Jonathon L. Baker

Identifying keystone species in microbial communities using deep learning

Nature Ecology & Evolution(2023)10.1038/s41559-023-02250-2

N/A

0DataRank · unranked

89 citations

Zheng Sun, Huijue Jia, Sebastian Michel-Mata, Marco Tulio Angulo, Lei Dai +4 more

Specific host metabolite and gut microbiome alterations are associated with bone loss during spaceflight

Cell Reports(2023)10.1016/j.celrep.2023.112299

N/A

0DataRank · unranked

33 citations

Kristopher A. Kerns, Tsute Chen, Bruno P. Lima, Guo Liu, Pin Ha +22 more

Ultrasmall epibiont Nanosynbacter lyticus strain TM7x and host bacteria transcriptional activity after initial host parasitism

Journal of Oral Microbiology(2023)10.1080/20002297.2023.2287349

N/A

0DataRank · unranked

7 citations

Batbileg Bor, Kristopher A. Kerns, Lujia Cen, Wenyuan Shi, Xuesong He +2 more

Unraveling the Link between Periodontitis and Inflammatory Bowel Disease: Challenges and Outlook

arXiv (Cornell University)(2023)10.48550/arxiv.2308.10907

N/A

0DataRank · unranked

9 citations

Jeba Mercy Gnanasekaran, Devon L. Allison, Ling-Shiang Chuang, Xuesong He, Mario Aimetti +10 more

Identifying keystone species in microbial communities using deep learning

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.15.532858

N/A

0DataRank · unranked

6 citations

Zheng Sun, Huijue Jia, Sebastian Michel-Mata, Marco Tulio Angulo, Lei Dai +4 more

Persistent enrichment of multidrug resistant Klebsiella in oral and nasal communities during long-term starvation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.18.572173

N/A

0DataRank · unranked

1 citations

Nell Spencer, Daniel R. Utter, Alex S. Grossman, Nídia C. Castro dos Santos, Wenyuan Shi +5 more

The Evolving Microbiome of Dental Caries

Microorganisms(2024)10.3390/microorganisms12010121

N/A

0DataRank · unranked

246 citations

Yihong Li, Xuesong He, Annie Cowan, A. C. R. Tanner, Grace Spatafora

Unravelling the Oral–Gut Axis: Interconnection Between Periodontitis and Inflammatory Bowel Disease, Current Challenges, and Future Perspective

Journal of Crohn s and Colitis(2024)10.1093/ecco-jcc/jjae028

N/A

0DataRank · unranked

59 citations

Jeba Mercy Gnanasekaran, Devon L. Allison, Ling-Shiang Chuang, Xuesong He, Mario Aimetti +10 more

Episymbiotic Saccharibacteria TM7x modulates the susceptibility of its host bacteria to phage infection and promotes their coexistence

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2319790121

N/A

0DataRank · unranked

33 citations

Binyou Liao, Jiazhen Liu, Wei Shen, Jing Wang, Leilei Wei +13 more

Targeted elimination of Fusobacterium nucleatum alleviates periodontitis

Journal of Oral Microbiology(2024)10.1080/20002297.2024.2388900

N/A

0DataRank · unranked

18 citations

Özge Ünlü, Lujia Cen, Hatice Hastürk, Tsute Chen, Wenyuan Shi +3 more

Epigallocatechin gallate reduces the virulence of cariogenic Streptococcus mutans biofilm by affecting the synthesis of biofilm matrix components

Archives of Oral Biology(2024)10.1016/j.archoralbio.2024.105990

N/A

0DataRank · unranked

10 citations

Xuesong He, Carolina Patrícia Aires, Silmara Aparecida Milori Corona, Maria Gerusa Brito Aragão

Adhesive interactions within microbial consortia can be differentiated at the single-cell level through expansion microscopy

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2411617121

N/A

0DataRank · unranked

4 citations

Wenyuan Shi, Xuesong He, Gary G. Borisy, Pu‐Ting Dong

Saccharibacteria deploy two distinct Type IV pili, driving episymbiosis, host competition, and twitching motility

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.25.624915

N/A

0DataRank · unranked

5 citations

Lei Lei, Jack M. Botting, Jett Liu, Nusrat Nahar, João Gabriel Silva Souza +5 more

Identification of P-type ATPase as a bacterial transporter for host-derived small RNA

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.05.602285

N/A

0DataRank · unranked

3 citations

Mengdi Yang, Lujia Cen, Peng Zhou, Difei Xu, Peng Xiong +4 more

Saccharibacteria deploy two distinct type IV pili, driving episymbiosis, host competition, and twitching motility

The ISME Journal(2025)10.1093/ismejo/wraf119

N/A

0DataRank · unranked

9 citations

Lei Lei, Jack M. Botting, Jett Liu, Nusrat Nahar, Jun Liu +4 more

Underscoring long-term host-microbiome interactions in a physiologically relevant gingival tissue model

npj Biofilms and Microbiomes(2025)10.1038/s41522-024-00641-2

N/A

0DataRank · unranked

8 citations

G. E. Callen, Alejandro R. Díaz, Bruce J. Paster, Xuesong He, Hatice Hastürk +2 more

Identification of a Fusobacterial RNA-binding protein involved in host small RNA-mediated growth inhibition

International Journal of Oral Science(2025)10.1038/s41368-025-00378-4

N/A

0DataRank · unranked

2 citations

Mengdi Yang, Jie Hu, Lujia Cen, Peng Zhou, Difei Xu +4 more

Identifying essential genes in Schaalia odontolytica using a saturated transposon library

Journal of Bacteriology(2025)10.1128/jb.00164-25

N/A

0DataRank · unranked

2 citations

Jacob Bourgeois, Pooja Balani, Lujia Cen, Erik L. Hendrickson, Kristopher A. Kerns +5 more

Episymbiotic Saccharibacteria suppresses epithelial immunoactivation through Type IV pili and TLR2 dependent endocytosis

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.30.656655

N/A

0DataRank · unranked

4 citations

Alex S. Grossman, Kristopher A. Kerns, Kendall S. Stocke, Maya Kim, Pu‐Ting Dong +7 more

Microbial dark matter and the future of dentistry

JADA Foundational Science(2025)10.1016/j.jfscie.2024.100043

N/A

0DataRank · unranked

0 citations

Batbileg Bor, Xuesong He, Jill Sirko

Development of a Bacteriophage Cocktail to Constrain the Emergence of Phage-Resistant Pseudomonas aeruginosa

Frontiers in Microbiology(2020)10.3389/fmicb.2020.00327

N/A

0DataRank · unranked

203 citations

Wei Shen, Qiu Zhong, Qian Chen, Xuesong He, Jonathon L. Baker +6 more

Microbial dark matter and the future of dentistry

The Journal of the American Dental Association(2025)10.1016/j.adaj.2024.11.003

N/A

0DataRank · unranked

0 citations

Batbileg Bor, Xuesong He, Jill Sirko

Acquisition and Adaptation of Ultra-small Parasitic Reduced Genome Bacteria to Mammalian Hosts

Cell Reports(2020)10.1016/j.celrep.2020.107939

N/A

0DataRank · unranked

137 citations

Batbileg Bor, Kristopher A. Kerns, Quanhui Liu, Thao T. To, Lindsey Solden +5 more

The saccharibacterium TM7x elicits differential responses across its host range

The ISME Journal(2020)10.1038/s41396-020-00736-6

N/A

0DataRank · unranked

55 citations

Xuesong He, Colleen M. Cavanaugh, Jeffrey S. McLean, Batbileg Bor, Daniel R. Utter

Xuesong He

Indexed papers

Top data-sharing exemplar

Papers