Efrem S. Lim

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile

0.502Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Unrestricted Online Sharing of High-frequency, High-resolution Data on SARS-CoV-2 in Wastewater to Inform the COVID-19 Public Health Response in Greater Tempe, Arizona

medRxiv(2021)10.1101/2021.07.29.21261338

Top 38%

0.502DataRank

Top 38%9 citations

Erin M. Driver, Simona Kraberger, Rafaela S. Fontenele, LaRinda A. Holland, Jillian Wright +23 more

Papers

Driven by 29 papers — median percentile 62. Top paper: “Unrestricted Online Sharing of High-frequency, High-resolution Data on SARS-CoV-2 in Wastewater to Inform the COVID-19 Public Health Response in Greater Tempe, Arizona”.

Unrestricted Online Sharing of High-frequency, High-resolution Data on SARS-CoV-2 in Wastewater to Inform the COVID-19 Public Health Response in Greater Tempe, Arizona

medRxiv(2021)10.1101/2021.07.29.21261338

Top 38%

0.502DataRank

Top 38%9 citations

Erin M. Driver, Simona Kraberger, Rafaela S. Fontenele, LaRinda A. Holland, Jillian Wright +23 more

Gut virome and microbiome dynamics before and after SARS-CoV-2 infection in women living with HIV and their infants

Gut Microbes(2024)10.1080/19490976.2024.2394248

N/A

0.208DataRank · unranked

3 citations

LaRinda A. Holland, Lily I. Wu, Emily R. Begnel, Judith Adhiambo, Prestone Owiti +10 more

Longitudinal alterations in the urinary virome of kidney transplant recipients are influenced by BK viremia and patient sex

Microbiology Spectrum(2024)10.1128/spectrum.04055-23

N/A

0.184DataRank · unranked

2 citations

Lily I. Wu, Daniel C. Brennan, Efrem S. Lim, Rabia Maqsood

Immune protection is dependent on the gut microbiome in a lethal mouse gammaherpesviral infection

Scientific Reports(2020)10.1038/s41598-020-59269-9

N/A

0DataRank · unranked

25 citations

Sriram Ambadapadi, Liqiang Zhang, Ramani Chavan, Scott A. Tibbetts, Shahar Keinan +13 more

An 81 base-pair deletion in SARS-CoV-2 ORF7a identified from sentinel surveillance in Arizona (Jan-Mar 2020)

medRxiv(2020)10.1101/2020.04.17.20069641

N/A

0DataRank · unranked

23 citations

Emily A. Kaelin, Rabia Maqsood, Bereket Estifanos, Lily I. Wu, Arvind Varsani +5 more

Defining the Pandemic at the State Level: Sequence-Based Epidemiology of the SARS-CoV-2 virus by the Arizona COVID-19 Genomics Union (ACGU)

medRxiv(2020)10.1101/2020.05.08.20095935

N/A

0DataRank · unranked

6 citations

Brendan B. Larsen, Jolene R. Bowers, Crystal M. Hepp, Evan Bolyen, Megan Folkerts +18 more

High-throughput sequencing of SARS-CoV-2 in wastewater provides insights into circulating variants

Water Research(2021)10.1016/j.watres.2021.117710

N/A

0DataRank · unranked

177 citations

Simona Kraberger, James Hadfield, Erin M. Driver, Devin A. Bowes, LaRinda A. Holland +23 more

Andrographolide Attenuates Gut-Brain-Axis Associated Pathology in Gulf War Illness by Modulating Bacteriome-Virome Associated Inflammation and Microglia-Neuron Proinflammatory Crosstalk

Brain Sciences(2021)10.3390/brainsci11070905

N/A

0DataRank · unranked

24 citations

Peter T. Skidmore, LaRinda A. Holland, Ayan Mondal, Dipro Bose, Ratanesh Seth +9 more

Genomic Sequencing of SARS-CoV-2 E484K Variant B.1.243.1, Arizona, USA

Emerging infectious diseases(2021)10.3201/eid2710.211189

N/A

0DataRank · unranked

7 citations

Emily A. Kaelin, LaRinda A. Holland, Rabia Maqsood, Lily I. Wu, Nicholas J. Mellor +6 more

High-throughput sequencing of SARS-CoV-2 in wastewater provides insights into circulating variants

medRxiv(2021)10.1101/2021.01.22.21250320

N/A

0DataRank · unranked

53 citations

Simona Kraberger, James Hadfield, Erin M. Driver, Devin A. Bowes, LaRinda A. Holland +23 more

Andrographolide Treatment Lessens Localized, Systemic Inflammation and Improves Other Pathophysiological Traits in a Mouse Model of Gulf War Illness

The FASEB Journal(2021)10.1096/fasebj.2021.35.s1.03556

N/A

0DataRank · unranked

0 citations

Peter T. Skidmore, LaRinda A. Holland, Ayan Mondal, Dipro Bose, Ratanesh Seth +9 more

Longitudinal gut virome analysis identifies specific viral signatures that precede necrotizing enterocolitis onset in preterm infants

Nature Microbiology(2022)10.1038/s41564-022-01096-x

N/A

0DataRank · unranked

89 citations

Cynthia Rodríguez, Carla Hall-Moore, Julie Hoffmann, Laura Linneman, I. Malick Ndao +5 more

Leveraging an established neighbourhood-level, open access wastewater monitoring network to address public health priorities: a population-based study

The Lancet Microbe(2022)10.1016/s2666-5247(22)00289-0

N/A

0DataRank · unranked

38 citations

Erin M. Driver, Simona Kraberger, Rafaela S. Fontenele, LaRinda A. Holland, Jillian Wright +23 more

Comparison of nucleocapsid and spike antibody ELISAs for determining SARS‐CoV‐2 seropositivity in Kenyan women and infants

Journal of Medical Virology(2022)10.1002/jmv.28221

N/A

0DataRank · unranked

2 citations

Prestone Owiti, Emily R. Begnel, Hannah L. Itell, Ednah Ojee, Judith Adhiambo +14 more

Viral anti‐inflammatory serpin reduces immuno‐coagulopathic pathology in SARS‐CoV‐2 mouse models of infection

EMBO Molecular Medicine(2023)10.15252/emmm.202317376

N/A

0DataRank · unranked

12 citations

Yize Li, Karen V. Kibler, Simona Kraberger, Arvind Varsani, Julie Turk +27 more

HIV and SARS-CoV-2 infection in postpartum Kenyan women and their infants

PLoS ONE(2023)10.1371/journal.pone.0278675

N/A

0DataRank · unranked

10 citations

Bhavna Chohan, Ednah Ojee, Judith Adhiambo, Prestone Owiti, Vincent Ogweno +13 more

Late‐Season Influenza Vaccine Effectiveness Against Medically Attended Outpatient Illness, United States, December 2022–April 2023

Influenza and Other Respiratory Viruses(2024)10.1111/irv.13342

N/A

0DataRank · unranked

12 citations

Philip Shirk, Manjusha Gaglani, Manohar B. Mutnal, Mary Patricia Nowalk, Krissy Moehling Geffel +19 more

Viral concentration method biases in the detection of viral profiles in wastewater

Applied and Environmental Microbiology(2024)10.1128/aem.01339-24

N/A

0DataRank · unranked

10 citations

Absar Alum, Matthew F. Smith, Efrem S. Lim, Otakuye Conroy‐Ben, Morteza Abbaszadegan +1 more

Genome sequences of human anelloviruses in the Lamedtorquevirus , Memtorquevirus , and Samektorquevirus genera identified from the female genital tract

Microbiology Resource Announcements(2024)10.1128/mra.00582-24

N/A

0DataRank · unranked

2 citations

Steven C. Holland, Emily A. Kaelin, Caroline M. Mitchell, Jaime Soria, Alberto La Rosa +6 more

Longitudinal cervicovaginal microbiome and virome alterations during ART and discordant shedding in women living with HIV

Research Square(2024)10.21203/rs.3.rs-4078561/v1

N/A

0DataRank · unranked

4 citations

Caroline M. Mitchell, Jamie Soria, Alberto La Rosa, Eduardo Ticona, Robert W. Coombs +4 more

Longitudinal alterations in the Urinary Virome of Kidney Transplant Recipients are Influenced by BK viremia and Patient Sex

Research Square(2024)10.21203/rs.3.rs-4257367/v1

N/A

0DataRank · unranked

1 citations

Lily I. Wu, Daniel C. Brennan, Efrem S. Lim, Rabia Maqsood

Longitudinal dynamics of the nasopharyngal microbiome in response to SARS-CoV-2 Omicron variant and HIV infection in Kenyan women and their infants

Research Square(2024)10.21203/rs.3.rs-4257641/v1

N/A

0DataRank · unranked

0 citations

Victoria R. Leonard, LaRinda A. Holland, James C. Hu, Tianchen Mu, Steven C. Holland +12 more

Gut virome and microbiome dynamics before and after SARS-CoV-2 infection in women living with HIV and their infants

Research Square(2024)10.21203/rs.3.rs-4257515/v1

N/A

0DataRank · unranked

0 citations

LaRinda A. Holland, Lily I. Wu, Emily R. Begnel, Judith Adhiambo, Prestone Owiti +10 more

Longitudinal cervicovaginal bacteriome and virome alterations associate with discordant shedding and ART duration in women living with HIV in Peru

Nature Communications(2025)10.1038/s41467-025-63158-y

N/A

0DataRank · unranked

5 citations

Caroline M. Mitchell, Jaime Soria, Alberto La Rosa, Eduardo Ticona, Robert W. Coombs +4 more

The Linda Kizazi study: a comparison of morbidity and mortality from birth to 2 years between children who are HIV-unexposed and HIV-exposed, uninfected in the era of universal antiretroviral therapy

BMJ Global Health(2025)10.1136/bmjgh-2024-015841

N/A

0DataRank · unranked

3 citations

Ednah Ojee, Judy Adhiambo, Eliza Mabele, Brenda Wandika, Vincent Ogweno +7 more

An 81-Nucleotide Deletion in SARS-CoV-2 ORF7a Identified from Sentinel Surveillance in Arizona (January to March 2020)

Journal of Virology(2020)10.1128/jvi.00711-20

N/A

0DataRank · unranked

144 citations

Emily A. Kaelin, Rabia Maqsood, Bereket Estifanos, Lily I. Wu, Arvind Varsani +5 more

Longitudinal dynamics of the nasopharyngeal microbiome in response to SARS-CoV-2 Omicron variant and HIV infection in Kenyan women and their children

mSystems(2025)10.1128/msystems.01568-24

N/A

0DataRank · unranked

0 citations

Victoria R. Leonard, LaRinda A. Holland, James C. Hu, Tianchen Mu, Steven C. Holland +12 more

SV40 Large T Antigen Is Not Responsible for the Loss of STING in 293T Cells but Can Inhibit cGAS-STING Interferon Induction

Viruses(2020)10.3390/v12020137

N/A

0DataRank · unranked

42 citations

Guillermo S. Trivino-Soto, Lily I. Wu, Kristiana Kokott, Efrem S. Lim, Joshua B. Reus

An Early Pandemic Analysis of SARS-CoV-2 Population Structure and Dynamics in Arizona

mBio(2020)10.1128/mbio.02107-20

N/A

0DataRank · unranked

33 citations

Brendan B. Larsen, Jolene R. Bowers, Crystal M. Hepp, Evan Bolyen, Megan Folkerts +18 more

Efrem S. Lim

Indexed papers

Top data-sharing exemplar

Papers