Mehmet Koyutürk

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 28 papers. Top paper: “Robust inference of kinase activity using functional networks”.

Robust inference of kinase activity using functional networks

Nature Communications(2021)10.1038/s41467-021-21211-6

N/A

2.5DataRank · unranked

86 citations

Marzieh Ayati, Daniela Schlatzer, A. Ercüment Çiçek, Mark R. Chance, Mehmet Koyutürk +1 more

Current and future directions in network biology

Bioinformatics Advances(2024)10.1093/bioadv/vbae099

N/A

1.6DataRank · unranked

100 citations

Michelle M. Li, Aydin Wells, Kimberly Glass, Deisy Morselli Gysi, Krishnan, Arjun +32 more

Making proteomics accessible: Rokai Xplorer for interactive analysis of phospho-proteomic data

Bioinformatics Advances(2024)10.1093/bioadv/vbae077

N/A

0.230DataRank · unranked

3 citations

Filipa Blasco Tavares Pereira Lopes, Daniela Schlatzer, Marzieh Ayati, Mark R. Chance, Mehmet Koyutürk +1 more

Integrated querying and version control of context-specific biological networks

Database(2020)10.1093/database/baaa018

N/A

0DataRank · unranked

5 citations

Mustafa Coşkun, Ananth Grama, Mehmet Koyutürk, Tyler Cowman

Robust Inference of Kinase Activity Using Functional Networks

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.01.062802

N/A

0DataRank · unranked

10 citations

Marzieh Ayati, Daniela Schlatzer, A. Ercüment Çiçek, Mark R. Chance, Mehmet Koyutürk +1 more

Co-Phosphorylation Networks Reveal Subtype-Specific Signaling Modules in Breast Cancer

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.04.073148

N/A

0DataRank · unranked

6 citations

Mark R. Chance, Mehmet Koyutürk, Marzieh Ayati

Node similarity-based graph convolution for link prediction in biological networks

Bioinformatics(2021)10.1093/bioinformatics/btab464

N/A

0DataRank · unranked

63 citations

Mehmet Koyutürk, Mustafa Coşkun

Data-driven identification of subtypes of intimate partner violence

Scientific Reports(2021)10.1038/s41598-021-85947-3

N/A

0DataRank · unranked

8 citations

Serhan Yılmaz, Douglas B. Smith, Jason B. Whiting, Mehmet Koyutürk, Günnur Karakurt +1 more

Identification of Intimate Partner Violence from Free Text Descriptions in Social Media

medRxiv(2021)10.1101/2021.12.15.21267694

N/A

0DataRank · unranked

1 citations

Rhea D’Silva, Ethan Chen, Mehmet Koyutürk, Günnur Karakurt, Phan Trinh Ha

Circulating microbial content in myeloid malignancy patients carries diagnostic and prognostic potential

Research Square(2021)10.21203/rs.3.rs-380836/v1

N/A

0DataRank · unranked

0 citations

Jakob Woerner, Yidi Huang, Stephan Hütter, J. M. Sanchez, Janet Wang +8 more

Constructing Functional Networks of Phosphorylation Sites Using Co-Phosphorylation

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.16.456448

N/A

0DataRank · unranked

0 citations

Serhan Yılmaz, Mark R. Chance, Mehmet Koyutürk, Marzieh Ayati

Circulating microbial content in myeloid malignancy patients is associated with disease subtypes and patient outcomes

Nature Communications(2022)10.1038/s41467-022-28678-x

N/A

0DataRank · unranked

40 citations

Yidi Huang, Stephan Hütter, Carmelo Gurnari, J. M. Sanchez, Janet Wang +12 more

Temporal and Sex-Linked Protein Expression Dynamics in a Familial Model of Alzheimer’s Disease

Molecular & Cellular Proteomics(2022)10.1016/j.mcpro.2022.100280

N/A

0DataRank · unranked

20 citations

Daniela Schlatzer, Rihua Wang, Xiaolin Li, Emily Feng, Mehmet Koyutürk +3 more

Functional characterization of co-phosphorylation networks

Bioinformatics(2022)10.1093/bioinformatics/btac406

N/A

0DataRank · unranked

9 citations

Serhan Yılmaz, Mark R. Chance, Mehmet Koyutürk, Marzieh Ayati

Prediction of Kinase-Substrate Associations Using The Functional Landscape of Kinases and Phosphorylation Sites

PubMed(2022)10.1142/9789811270611_0008

N/A

0DataRank · unranked

4 citations

Serhan Yılmaz, Filipa Blasco Tavares Pereira Lopes, Mark R. Chance, Mehmet Koyutürk, Marzieh Ayati

Are under-studied proteins under-represented? How to fairly evaluate link prediction algorithms in network biology

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.13.511953

N/A

0DataRank · unranked

1 citations

Kaan Yorgancıoğlu, Mehmet Koyutürk, Serhan Yılmaz

Utilization of Landscape of Kinases and Phosphosites To Predict Kinase-Substrate Association

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.22.489231

N/A

0DataRank · unranked

0 citations

Serhan Yılmaz, Filipa Blasco Tavares Pereira Lopes, Mark R. Chance, Mehmet Koyutürk, Marzieh Ayati

Adverse health correlates of intimate partner violence against older women: Mining electronic health records

PLoS ONE(2023)10.1371/journal.pone.0281863

N/A

0DataRank · unranked

7 citations

Erkan Gunay, Da Hee Lee, Kathleen Whiting, Kristin E. Silver, Mehmet Koyutürk +2 more

Systematic Investigation of Meta-Analysis Data on Treatment Effectiveness for Physical, Psychological, and Sexual Intimate Partner Violence Perpetration

Psychosocial Intervention(2023)10.5093/pi2023a6

N/A

0DataRank · unranked

5 citations

Mehmet Koyutürk, Günnur Karakurt, Çerağ Oğuztüzün

Current and future directions in network biology

arXiv (Cornell University)(2023)10.48550/arxiv.2309.08478

N/A

0DataRank · unranked

3 citations

Michelle M. Li, Aydin Wells, Kimberly Glass, Deisy Morselli Gysi, Krishnan, Arjun +32 more

Exploring Temporal and Sex-Linked Dysregulation in Alzheimer’s Disease Phospho-Proteome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.15.553056

N/A

0DataRank · unranked

1 citations

Filipa Blasco Tavares Pereira Lopes, Daniela Schlatzer, Rihua Wang, Xin Qi, Mehmet Koyutürk +2 more

Considerations in the search for epistasis

Genome biology(2024)10.1186/s13059-024-03427-z

N/A

0DataRank · unranked

16 citations

Johnathan Cooper‐Knock, Julian Stamp, Ross P. Byrne, Soufiane Mourragui, Juami H. M. van Gils +36 more

Exploring temporal and sex-linked dysregulation in Alzheimer disease phosphoproteome

iScience(2024)10.1016/j.isci.2024.110941

N/A

0DataRank · unranked

2 citations

Filipa Blasco Tavares Pereira Lopes, Daniela Schlatzer, Rihua Wang, Xin Qi, Mehmet Koyutürk +2 more

Methionine Sulfoxide Speciation in Mouse Hippocampus Revealed by Global Proteomics Exhibits Age- and Alzheimer’s Disease-Dependent Changes Targeted to Mitochondrial and Glycolytic Pathways

International Journal of Molecular Sciences(2024)10.3390/ijms25126516

N/A

0DataRank · unranked

1 citations

Daniela Schlatzer, Mengzhen Li, Serhan Yılmaz, Rihua Wang, Xin Qi +4 more

DeepKinZero: zero-shot learning for predicting kinase–phosphosite associations involving understudied kinases

Bioinformatics(2020)10.1093/bioinformatics/btaa013

N/A

0DataRank · unranked

52 citations

Busra Arabaci, Mehmet Koyutürk, Öznur Taştan, Iman Deznabi

Rethinking the Estrogen Receptor Beta Dominance Hypothesis in Endometriosis: Insights from Single Cell RNA Sequencing Meta-analysis

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.15.676330

N/A

0DataRank · unranked

0 citations

Christina Farr Zuend, Wendy A. Goodman, Mehmet Koyutürk, Douglas K. Brubaker, Alexis E. Heath

Co-phosphorylation networks reveal subtype-specific signaling modules in breast cancer

Bioinformatics(2020)10.1093/bioinformatics/btaa678

N/A

0DataRank · unranked

10 citations

Mark R. Chance, Mehmet Koyutürk, Marzieh Ayati

Interplay between traumatic brain injury and intimate partner violence: data driven analysis utilizing electronic health records

BMC Women s Health(2020)10.1186/s12905-020-01104-4

N/A

0DataRank · unranked

30 citations

William S. Bush, Mehmet Koyutürk, Günnur Karakurt, Larry Y. Liu