🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Jimin Pei

Southwestern Medical Center

ORCID: 0000-0002-3505-9665

Also affiliated with Southwestern Medical Center, The University of Texas Southwestern Medical Center

Biochemistry, Genetics and Molecular BiologyMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.4Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The DBSAV Database: Predicting Deleteriousness of Single Amino Acid Variations in the Human Proteome

Journal of Molecular Biology(2021)10.1016/j.jmb.2021.166915
Top 19%
1.1DataRank
Top 19%24 citations

Nick V. Grishin, Jimin Pei

Papers

Driven by 25 papers — median percentile 40. Top paper: “The DBSAV Database: Predicting Deleteriousness of Single Amino Acid Variations in the Human Proteome”.

The DBSAV Database: Predicting Deleteriousness of Single Amino Acid Variations in the Human Proteome

Journal of Molecular Biology(2021)10.1016/j.jmb.2021.166915
Top 19%
1.1DataRank
Top 19%24 citations

Nick V. Grishin, Jimin Pei

AFTM: a database of transmembrane regions in the human proteome predicted by AlphaFold

Database(2023)10.1093/database/baad008
N/A
0.628DataRank · unranked
15 citations

Qian Cong, Jimin Pei

Association of genetic variation in COL11A1 with adolescent idiopathic scoliosis

eLife(2024)10.7554/elife.89762.4
N/A
0.304DataRank · unranked
6 citations

Anas M. Khanshour, Aki Ushiki, Nao Otomo, Yoshinao Koike, Elísabet Einarsdóttir +20 more

DisEnrich: database of enriched regions in human dark proteome

Bioinformatics(2022)10.1093/bioinformatics/btac051
Top 60%
0.253DataRank
Top 60%4 citations

Jimin Pei, Nick V. Grishin, Kirill E. Medvedev

Association of genetic variation in COL11A1 with adolescent idiopathic scoliosis

eLife(2023)10.7554/elife.89762
N/A
0.216DataRank · unranked
3 citations

Anas M. Khanshour, Aki Ushiki, Nao Otomo, Yoshinao Koike, Elísabet Einarsdóttir +20 more

Case Studies of Orphan Domain Reclassification in ECOD by Expert Curation

Proteins Structure Function and Bioinformatics(2025)10.1002/prot.26840
Top 78%
0.104DataRank
Top 78%1 citations

R. Dustin Schaeffer, Qian Cong, Nick V. Grishin, Jimin Pei

Classification of domains in predicted structures of the human proteome

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2214069120
N/A
0DataRank · unranked
44 citations

Jing Zhang, Lisa N. Kinch, Jimin Pei, Qian Cong, Nick V. Grishin +1 more

Pathogenic mutation hotspots in protein kinase domain structure

Protein Science(2023)10.1002/pro.4750
N/A
0DataRank · unranked
15 citations

R. Dustin Schaeffer, Jimin Pei, Nick V. Grishin, Kirill E. Medvedev

Association of genetic variation in COL11A1 with adolescent idiopathic scoliosis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.26.542293
N/A
0DataRank · unranked
1 citations

Anas M. Khanshour, Aki Ushiki, Nao Otomo, Yoshinao Koike, Elísabet Einarsdóttir +20 more

Association of an estrogen-sensitive Pax1-Col11a1-Mmp3 signaling axis with adolescent idiopathic scoliosis

(2023)10.7554/elife.89762.1
N/A
0DataRank · unranked
0 citations

Anas M. Khanshour, Aki Ushiki, Nao Otomo, Yoshinao Koike, Elísabet Einarsdóttir +20 more

Identification of FDA-approved drugs that induce heart regeneration in mammals

Nature Cardiovascular Research(2024)10.1038/s44161-024-00450-y
N/A
0DataRank · unranked
25 citations

Ngoc Uyen Nhi Nguyen, Yuji Nakada, Ching‐Cheng Hsu, Ayman Farag, Nicholas T. Lam +23 more

Bridging the Gap between Sequence and Structure Classifications of Proteins with AlphaFold Models

Journal of Molecular Biology(2024)10.1016/j.jmb.2024.168764
N/A
0DataRank · unranked
14 citations

Antonina Andreeva, Sara Chuguransky, Beatriz Lázaro Pinto, Typhaine Paysan‐Lafosse, R. Dustin Schaeffer +4 more

Computing the Human Interactome

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.01.615885
N/A
0DataRank · unranked
30 citations

Ian R. Humphreys, Jimin Pei, Jinuk Kim, Chulwon Choi, Rongqing Yuan +7 more

Orthogonalized human protease control of secreted signals

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.18.576308
N/A
0DataRank · unranked
8 citations

Connor C. Call, Lucas E. Sant’Anna, Alexander E. Vlahos, Jimin Pei, Qian Cong +2 more

Essential and virulence-related protein interactions of pathogens revealed through deep learning

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.12.589144
N/A
0DataRank · unranked
2 citations

Jing Zhang, Minkyung Baek, Yaxi Wang, Aditya Krishnakumar, Jimin Pei +10 more

Assessment of Protein Complex Predictions in CASP16 : Are We Making Progress?

Proteins Structure Function and Bioinformatics(2025)10.1002/prot.70068
N/A
0DataRank · unranked
8 citations

Rongqing Yuan, Andriy Kryshtafovych, Jimin Pei, Rachael C. Kretsch, R. Dustin Schaeffer +5 more

Orthogonalized human protease control of secreted signals

Nature Chemical Biology(2025)10.1038/s41589-024-01831-x
N/A
0DataRank · unranked
8 citations

Connor C. Call, Lucas E. Sant’Anna, Alexander E. Vlahos, Jimin Pei, Qian Cong +2 more

Refinement and curation of homologous groups facilitated by structure prediction

Protein Science(2025)10.1002/pro.70074
N/A
0DataRank · unranked
0 citations

Jimin Pei, Jing Zhang, Qian Cong, Nick V. Grishin, R. Dustin Schaeffer

Exploring the Terra incognita of AI ‐based domain classifications

Protein Science(2025)10.1002/pro.70392
N/A
0DataRank · unranked
0 citations

Antonina Andreeva, Tiago Grego, Sara Chuguransky, Beatriz Lázaro, Noemí Flores +6 more

Using evolutionary context to classify difficult protein folds

PLoS Computational Biology(2025)10.1371/journal.pcbi.1013773
N/A
0DataRank · unranked
0 citations

R. Dustin Schaeffer, Qian Cong, Nick V. Grishin, Jimin Pei

A Fifth of the Protein World: Rossmann-like Proteins as an Evolutionarily Successful Structural unit

Journal of Molecular Biology(2020)10.1016/j.jmb.2020.166788
N/A
0DataRank · unranked
92 citations

Lisa N. Kinch, R. Dustin Schaeffer, Jimin Pei, Nick V. Grishin, Kirill E. Medvedev

Mutation severity spectrum of rare alleles in the human genome is predictive of disease type

PLoS Computational Biology(2020)10.1371/journal.pcbi.1007775
N/A
0DataRank · unranked
22 citations

Lisa N. Kinch, Zbyszek Otwinowski, Nick V. Grishin, Jimin Pei

Structures of core eukaryotic protein complexes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.30.462231
N/A
0DataRank · unranked
15 citations

Jimin Pei, Minkyung Baek, Aditya Krishnakumar, Ivan Anishchenko, Sergey Ovchinnikov +22 more

Evolution of a chordate-specific mechanism for myoblast fusion

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.24.453587
N/A
0DataRank · unranked
8 citations

Renjie Shang, Kwantae Kim, Wei Zheng, Christopher J. Johnson, Lei Sun +21 more

Impact of Asp/Glu‐ADP‐ribosylation on protein‐protein interaction and protein function

PROTEOMICS(2022)10.1002/pmic.202200083
N/A
0DataRank · unranked
8 citations

Jing Zhang, Xudong Wang, Chiho Kim, Yonghao Yu, Qian Cong +1 more