Stephanie M. Cologna

Also affiliated with University of Illinois Chicago, University of Chicago, Laboratoire d’immunologie intégrative du cancer

MedicineChemistryBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 46 papers. Top paper: “Identification of cerebral spinal fluid protein biomarkers in Niemann-Pick disease, type C1”.

Identification of cerebral spinal fluid protein biomarkers in Niemann-Pick disease, type C1

Biomarker Research(2023)10.1186/s40364-023-00448-x

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0.958DataRank · unranked

28 citations

Niamh X. Cawley, Rachel Luke, Katelin E. J. Scott, Nicholas L. Johnson, Nicole Y. Farhat +9 more

Taurine Is Covalently Incorporated into Alpha-Tubulin

Journal of Proteome Research(2020)10.1021/acs.jproteome.0c00147

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6 citations

Alfred L. Yergey, Kamalika Mukherjee, Melissa R. Pergande, Susan Bane, Stephanie M. Cologna +2 more

Visualising Cholesterol in Brain by On-Tissue Derivatisation and Quantitative Mass Spectrometry Imaging

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.06.369447

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1 citations

Eylan Yutuc, Mark F. Wyatt, Jillian Newton, Fowzi Adam Yusuf, Lauren Griffiths +14 more

Waning efficacy in a long-term AAV-mediated gene therapy study in the murine model of Krabbe disease

Molecular Therapy(2021)10.1016/j.ymthe.2021.01.026

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40 citations

Michael S. Marshall, Yazan Issa, Jeffrey N. Marshall, Duc Nguyen, Emily Rue +10 more

PHY34 inhibits autophagy through V-ATPase V0A2 subunit inhibition and CAS/CSE1L nuclear cargo trafficking in high grade serous ovarian cancer

Cell Death and Disease(2022)10.1038/s41419-021-04495-w

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32 citations

Alexandria N. Young, Andrew C. Huntsman, Melissa R. Pergande, Melissa A. Korkmaz, Rathnayake A. Rathnayake +13 more

Targeting lipid–protein interaction to treat Syk-mediated acute myeloid leukemia

Nature Chemical Biology(2022)10.1038/s41589-022-01150-z

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27 citations

Ashutosh Sharma, Shashank Pant, Muyun Lihan, Mi-Jeong Park, Melissa R. Pergande +10 more

Species-specific differences in NPC1 protein trafficking govern therapeutic response in Niemann-Pick type C disease

JCI Insight(2022)10.1172/jci.insight.160308

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15 citations

Kylie J. Schache, Ruth D. Azaria, Esmée Q. Kuiper, Steven Erwood, Evgueni A. Ivakine +7 more

Mass spectrometry-based proteomics in neurodegenerative lysosomal storage disorders

Molecular Omics(2022)10.1039/d2mo00004k

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11 citations

Stephanie M. Cologna, Wenping Li

Fallopian tube secreted protein affects ovarian metabolites in high grade serous ovarian cancer

Frontiers in Cell and Developmental Biology(2022)10.3389/fcell.2022.1042734

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8 citations

Sarah E. Levy, Katherine E. Zink, Hannah J. Lusk, Melissa R. Pergande, Stephanie M. Cologna +3 more

An integrated approach to protein discovery and detection from complex biofluids

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.03.474834

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3 citations

Chang Ge, Yisha Tang, Kailiang Li, Stephanie M. Cologna, Joanna E. Burdette +3 more

CD36 maintains lipid homeostasis via selective uptake of monounsaturated fatty acids during matrix detachment and tumor progression

Cell Metabolism(2023)10.1016/j.cmet.2023.09.012

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95 citations

Véronique Nogueira, Hyunsoo Rho, Gopalakrishnan Ramakrishnan, Jing Li, Soeun Kang +7 more

Discovery of a Small-Molecule Modulator of the Autophagy-Lysosome Pathway That Targets Lamin A/C and LAMP1, Induces Autophagic Flux, and Affects Lysosome Positioning in Neurons

ACS Chemical Neuroscience(2023)10.1021/acschemneuro.3c00573

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14 citations

Amanda M. Snead, Zoe A. Petros, Melissa A. Korkmaz, Sruchi Patel, Daniel Sotelo +8 more

SMART: A data reporting standard for mass spectrometry imaging

Journal of Mass Spectrometry(2023)10.1002/jms.4904

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34 citations

Alexandria L. Sohn, Alena N. Joignant, Stephanie M. Cologna, Boone M. Prentice, David C. Muddiman +1 more

An Integrated Approach to Protein Discovery and Detection From Complex Biofluids

Molecular & Cellular Proteomics(2023)10.1016/j.mcpro.2023.100590

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25 citations

Chang Ge, Yisha Tang, Kailiang Li, Stephanie M. Cologna, Andrew K. Godwin +4 more

Elevated cerebrospinal fluid ubiquitin C-terminal hydrolase-L1 levels correlate with phenotypic severity and therapeutic response in Niemann-Pick disease, type C1

Molecular Genetics and Metabolism(2023)10.1016/j.ymgme.2023.107656

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12 citations

Spencer Giddens, Nicole M. Farhat, Rachel Luke, Katelin E. J. Scott, Hibaaq O. Mohamed +6 more

α-Synuclein-dependent increases in PIP5K1γ drive inositol signaling to promote neurotoxicity

Cell Reports(2023)10.1016/j.celrep.2023.113244

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12 citations

Maria Casas, Candice Kutchukian, Sara Creus Sánchez, Melissa R. Pergande, Stephanie M. Cologna +4 more

Reduced endothelial caveolin-1 underlies deficits in brain insulin signalling in type 2 diabetes

Brain(2023)10.1093/brain/awad028

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11 citations

Abhirami Ramakrishnan, Liudmila Romanova, Wenping Li, Khanh Vo, Ipsita Volety +6 more

A differential proteomics study of cerebrospinal fluid from individuals with Niemann‐Pick disease, Type C1

PROTEOMICS(2023)10.1002/pmic.202200378

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8 citations

Melissa R. Pergande, Christopher A. Crutchfield, Brian C. Searle, Peter S. Backlund, Jaqueline A. Picache +8 more

Investigation of 2-Hydroxypropyl-β-Cyclodextrin Treatment in a Neuronal-Like Cell Model of Niemann–Pick Type C Using Quantitative Proteomics

Journal of the American Society for Mass Spectrometry(2023)10.1021/jasms.2c00342

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9 citations

Melissa R. Pergande, Fidel Serna‐Perez, Stephanie M. Cologna, Antony Cougnoux

Relative quantification of progressive changes in healthy and dysferlin‐deficient mouse skeletal muscle proteomes

Muscle & Nerve(2023)10.1002/mus.27975

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2 citations

Wenping Li, Paul S. Blank, Stephanie M. Cologna, Joshua Zimmerberg, Adriana E. Golding

Comparative Hippocampal Proteome and Phosphoproteome in a Niemann–Pick, Type C1 Mouse Model Reveal Insights into Disease Mechanisms

Journal of Proteome Research(2023)10.1021/acs.jproteome.3c00375

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2 citations

Varshasnata Mohanty, Ying Yan, Kevin R. Francis, Stephanie M. Cologna, Thu T. A. Nguyen

Gel-assisted mass spectrometry imaging

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.02.543480

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4 citations

Koralege C. Pathmasiri, Dominick Pierre-Jacques, Stephanie M. Cologna, Ruixuan Gao, Yat Ho Chan

DBDA matrix increases ion abundance of fatty acids and sulfatides in MALDI-TOF and mass spectrometry imaging studies

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.13.524013

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0 citations

Melissa R. Pergande, Koralege C. Pathmasiri, Rida Khan, Justin T. Mohr, Stephanie M. Cologna +1 more

Gel-assisted mass spectrometry imaging enables sub-micrometer spatial lipidomics

Nature Communications(2024)10.1038/s41467-024-49384-w

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41 citations

Koralege C. Pathmasiri, Dominick Pierre-Jacques, Maddison C. Hibbard, Nannan Tao, Joshua L. Fischer +4 more

Accumulation of alkyl-lysophosphatidylcholines in Niemann-Pick disease type C1

Journal of Lipid Research(2024)10.1016/j.jlr.2024.100600

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17 citations

Pamela Kell, David E. Scherrer, Dennis J. Dietzen, Charles H. Vite, Elizabeth Berry‐Kravis +6 more

Proteomics insights into fragile X syndrome: Unraveling molecular mechanisms and therapeutic avenues

Neurobiology of Disease(2024)10.1016/j.nbd.2024.106486

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13 citations

Elizabeth Berry‐Kravis, Xinyu Zhao, Stephanie M. Cologna, Diana A. Abbasi

Identifying the crucial binding domain of histatin-1 to recombinant TMEM97 in activating chemotactic migration in human corneal epithelial cells

Biochemical and Biophysical Research Communications(2024)10.1016/j.bbrc.2024.150991

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7 citations

Hyun Lee, Sangmin Lee, Dominick Pierre-Jacques, Dhara Shah, Stephanie M. Cologna +2 more

Follicular fluid aids cell adhesion, spreading in an age independent manner and shows an age-dependent effect on DNA damage in fallopian tube epithelial cells

Heliyon(2024)10.1016/j.heliyon.2024.e27336

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4 citations

Wenping Li, Shweta S. Dipali, Stephanie M. Cologna, Mary Ellen Pavone, Francesca E. Duncan +2 more

Mutant induced neurons and humanized mice enable identification of Niemann-Pick type C1 proteostatic therapies

JCI Insight(2024)10.1172/jci.insight.179525

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2 citations

Adele B. Correia, Kylie J. Schache, M. Camila Fernández Zapata, Koralege C. Pathmasiri, Varshasnata Mohanty +12 more

Temporal Alterations in White Matter in AnAppKnock-In Mouse Model of Alzheimer’s Disease

eNeuro(2024)10.1523/eneuro.0496-23.2024

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3 citations

Jin Gao, Aashutosh Shetti, Wenping Li, Liang Zhan, Weiguo Li +8 more

Molecular determinants of phospholipid treatment to reduce intracellular cholesterol accumulation in NPC1 deficiency

Journal of Biological Chemistry(2024)10.1016/j.jbc.2024.107889

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1 citations

T Liu, Olga Ilnytska, Tamara Allada, Angelina Fomina, Nancy Lin +8 more

Endogenous Protein–Protein Interaction Network of the NPC Cholesterol Transporter 1 in the Cerebral Cortex

Journal of Proteome Research(2024)10.1021/acs.jproteome.3c00788

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2 citations

Thu T. A. Nguyen, Ruth D. Azaria, Wenping Li, Daisy Edmison, Liang‐Wei Gong +5 more

Optimization of systemic AAV9 gene therapy in Niemann-Pick disease type C1 mice

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.07.597901

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2 citations

Alana L. Gibson, Tansy Gu, Cristin Davidson, Art Incao, Katerina Melnyk +7 more

Cholesterol-targeting Wnt–β-catenin signaling inhibitors for colorectal cancer

Nature Chemical Biology(2025)10.1038/s41589-025-01870-y

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17 citations

Julian Zalejski, Shruti V. Bendre, Simona Kavrokova, Hale S. Hasdemir, Defne G. Ozgulbas +20 more

The ocular surface tear film as a biomarker for systemic health

The Ocular Surface(2025)10.1016/j.jtos.2025.05.005

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16 citations

Omer Siddiqui, Joshua Ong, Chanon Thanitcul, Christian Reinhardt, Stephanie M. Cologna +2 more

Cerebellar lipid dysregulation in SCA3: A comparative study in patients and mice

Neurobiology of Disease(2025)10.1016/j.nbd.2025.106827

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6 citations

Varshasnata Mohanty, Stephanie M. Cologna, Hayley S. McLoughlin, Alexandra F. Putka

Neutrophils exposed to a cholesterol metabolite secrete extracellular vesicles that promote epithelial-mesenchymal transition and stemness in breast cancer cells

Cancer Letters(2025)10.1016/j.canlet.2025.218105

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5 citations

Yu Wang, Ki Lim, Anasuya Das Gupta, Ralph John Emerson J. Molino, Adam Lenczowski +17 more

Elevated Cerebrospinal Fluid Total Tau in Niemann‐Pick Disease Type C1 : Correlation With Clinical Severity and Response to Therapeutic Interventions

Journal of Inherited Metabolic Disease(2025)10.1002/jimd.70016

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4 citations

Ruyu Zhou, Nicole M. Farhat, James Iben, Derek Alexander, Rachel Luke +11 more

mTOR inhibition reprograms cellular lipid homeostasis by inducing alternative lipid uptake and promoting cholesterol transport

Molecular Cell(2025)10.1016/j.molcel.2025.08.021

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4 citations

Min-Joon Han, Ishika Patel, Alia M. Welsh, Maria Sverdlov, Wonhwa Cho +4 more

Biomarker Validation in NPC1 : Foundations for Clinical Trials and Regulatory Alignment

Journal of Inherited Metabolic Disease(2025)10.1002/jimd.70075

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1 citations

Stephanie M. Cologna, Elizabeth Berry‐Kravis, Jeanine R. Jarnes, Forbes D. Porter, Krista Casazza

Probing the force-from-lipid mechanism with synthetic polymers

eLife(2025)10.7554/elife.103617

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0 citations

Jan Steinkühler, Audra Lemley, Megan Larmore, Taylor F. Gunnels, Leo Ng +4 more

Probing the force-from-lipid mechanism with synthetic polymers

eLife(2025)10.7554/elife.103617.1

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0 citations

Jan Steinkühler, Audra Lemley, Megan Larmore, Taylor F. Gunnels, Leo Ng +4 more

Serum neurofilament light protein as a biomarker in Niemann-Pick disease, type C1

Genetics in Medicine Open(2025)10.1016/j.gimo.2025.103443

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0 citations

Ruyu Zhou, Avani V. Mylvara, Cameron Padilla, Derek Alexander, Nicole Y. Farhat +7 more

Multiomic Analysis Reveals Molecular Pathways Associated with Intestinal Aggregation of α-Synuclein

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.27.672706

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0 citations

Yan Yan, Dylan Thai, Stephanie M. Cologna, Elizabeth N. Bess, J. Bálsamo

Deregulation of signalling in genetic conditions affecting the lysosomal metabolism of cholesterol and galactosyl-sphingolipids

Neurobiology of Disease(2020)10.1016/j.nbd.2020.105142

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14 citations

Stephanie M. Cologna, Maria I. Givogri, Ernesto R. Bongarzone, Swetha Gowrishankar

Mass spectrometry-based lipid analysis in NPC1 disease: Methods for phosphoinositide quantification, lipid imaging, and myelin lipid profiling

Methods in enzymology on CD-ROM/Methods in enzymology(2025)10.1016/bs.mie.2025.11.003

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0 citations

Stephanie M. Cologna, Koralege C. Pathmasiri