Zhe Liu

Also affiliated with Janelia Research Campus, Texas A&M University

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 20 papers. Top paper: “Single-cell chromatin accessibility of developing murine pancreas identifies cell state-specific gene regulatory programs”.

Single-cell chromatin accessibility of developing murine pancreas identifies cell state-specific gene regulatory programs

Molecular Metabolism(2023)10.1016/j.molmet.2023.101735

N/A

0.460DataRank · unranked

9 citations

X. Yao, Sean Chang, Zhe Liu, Julie B. Sneddon, Sean de la O

Rational Design of Bioavailable Photosensitizers for Manipulation and Imaging of Biological Systems

Cell chemical biology(2020)10.1016/j.chembiol.2020.07.001

N/A

0DataRank · unranked

38 citations

Anthony X. Ayala, Jonathan B. Grimm, Ariana N. Tkachuk, Guillaume A. Castillon, Sébastien Phan +8 more

EcDNA hubs drive cooperative intermolecular oncogene expression

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.19.390278

N/A

0DataRank · unranked

15 citations

Kathryn E. Yost, Liangqi Xie, Sihan Wu, Joshua T. Lange, Connor V. Duffy +14 more

Deuteration improves small-molecule fluorophores

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.17.250027

N/A

0DataRank · unranked

11 citations

Liangqi Xie, Jason C. Casler, Ronak Patel, Ariana N. Tkachuk, Heejun Choi +6 more

ecDNA hubs drive cooperative intermolecular oncogene expression

Nature(2021)10.1038/s41586-021-04116-8

N/A

0DataRank · unranked

344 citations

Kathryn E. Yost, Liangqi Xie, Quanming Shi, Konstantin Helmsauer, Jens Luebeck +29 more

Principles of ecDNA random inheritance drive rapid genome change and therapy resistance in human cancers

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.11.447968

N/A

0DataRank · unranked

16 citations

Celine Chen, Yuriy Pichugin, Liangqi Xie, Jun Tang, King L. Hung +14 more

Nanometer-Scale Imaging of Compartment-Specific Localization and Dynamics of Voltage-Gated Sodium Channels

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.28.462114

N/A

0DataRank · unranked

2 citations

Hong‐Gang Wang, Geoffrey S. Pitt, Zhe Liu, Hui Liu

The evolutionary dynamics of extrachromosomal DNA in human cancers

Nature Genetics(2022)10.1038/s41588-022-01177-x

N/A

0DataRank · unranked

199 citations

John C. Rose, Celine Chen, Yuriy Pichugin, Liangqi Xie, Jun Tang +17 more

Direct Observation of Compartment-Specific Localization and Dynamics of Voltage-Gated Sodium Channels

Journal of Neuroscience(2022)10.1523/jneurosci.0086-22.2022

N/A

0DataRank · unranked

22 citations

Hong‐Gang Wang, Geoffrey S. Pitt, Zhe Liu, Hui Liu

YAP condensates are highly organized hubs for YAP/TEAD transcription

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.24.513621

N/A

0DataRank · unranked

8 citations

Hannah Fuehrer, Eduardo Flores, Justin Demmerle, Jennifer Lippincott‐Schwartz, Zhe Liu +3 more

Spatial organization of the 3D genome encodes gene co-expression programs in single cells

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.26.513917

N/A

0DataRank · unranked

0 citations

Shu Zhang, Liangqi Xie, Lihua Wang, Andrew L. Lemire, Arthur D. Lander +3 more

DNA-initiated epigenetic cascades driven by C9orf72 hexanucleotide repeat

Neuron(2023)10.1016/j.neuron.2023.01.022

N/A

0DataRank · unranked

23 citations

Zhiyuan Huang, Honghe Liu, Zhicheng Ji, Amit Arora, Danfeng Cai +8 more

Correlative single molecule lattice light sheet imaging reveals the dynamic relationship between nucleosomes and the local chromatin environment

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.09.566470

N/A

0DataRank · unranked

1 citations

Yu Shi, Katie L. Holland, Hosein Rostamian, Zhe Liu, Luke D. Lavis +4 more

KMT2 Family of H3K4 Methyltransferases: Enzymatic Activity-dependent and -independent Functions

Journal of Molecular Biology(2024)10.1016/j.jmb.2024.168453

N/A

0DataRank · unranked

38 citations

Guojia Xie, Peng Dong, Zhe Liu, Kai Ge, Hieu T. Van

YAP condensates are highly organized hubs

iScience(2024)10.1016/j.isci.2024.109927

N/A

0DataRank · unranked

38 citations

Ye Jin Lee, Nadav Benhamou Goldfajn, Eduardo Flores, Jindayi Liang, Hannah Fuehrer +6 more

Correlative single molecule lattice light sheet imaging reveals the dynamic relationship between nucleosomes and the local chromatin environment

Nature Communications(2024)10.1038/s41467-024-48562-0

N/A

0DataRank · unranked

28 citations

Yu Shi, Katie L. Holland, Hosein Rostamian, Zhe Liu, Luke D. Lavis +4 more

Cohesin prevents cross-domain gene coactivation

Nature Genetics(2024)10.1038/s41588-024-01852-1

N/A

0DataRank · unranked

18 citations

Shu Zhang, Valentina Gandin, Liangqi Xie, Lihua Wang, Andrew L. Lemire +7 more

Correlative single molecule lattice light sheet imaging reveals the dynamic relationship between nucleosomes and the local chromatin environment

UNC Libraries(2024)10.17615/ebf0-9h73

N/A

0DataRank · unranked

0 citations

Yu Shi, Wesley R. Legant, Katie L. Holland, Brian D. Strahl, Luke D. Lavis +4 more

Two-parameter single-molecule analysis for measurement of chromatin mobility

STAR Protocols(2020)10.1016/j.xpro.2020.100223

N/A

0DataRank · unranked

11 citations

Pablo Aurelio Gómez-García, Ryan L. McCarthy, Zhe Liu, Melike Lakadamyali, Kenneth S. Zaret +1 more

MPRAbase a Massively Parallel Reporter Assay database

Genome Research(2025)10.1101/gr.280387.124

N/A

0DataRank · unranked

7 citations

Fotis A. Baltoumas, Maxwell A. Konnaris, Ioannis Mouratidis, Zhe Liu, Jasmine Sims +5 more