Rustem F. Ismagilov

Engineering

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 27 papers. Top paper: “Morning SARS-CoV-2 testing yields better detection of infection due to higher viral loads in saliva and nasal swabs upon waking”.

Morning SARS-CoV-2 testing yields better detection of infection due to higher viral loads in saliva and nasal swabs upon waking

medRxiv(2022)10.1101/2022.03.02.22271724

N/A

0.292DataRank · unranked

6 citations

Michael K. Porter, Anna E. Romano, Emily S. Savela, Reid Akana, Natasha Shelby +11 more

A quantitative sequencing framework for absolute abundance measurements of mucosal and lumenal microbial communities

Nature Communications(2020)10.1038/s41467-020-16224-6

N/A

0DataRank · unranked

190 citations

Said R. Bogatyrev, Rustem F. Ismagilov, Jacob T. Barlow

Surfactant-enhanced DNA accessibility to nuclease accelerates phenotypic β-lactam antibiotic susceptibility testing of Neisseria gonorrhoeae

PLoS Biology(2020)10.1371/journal.pbio.3000651

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0DataRank · unranked

12 citations

Nathan G. Schoepp, Matthew M. Cooper, Justin C. Rolando, Jeffrey D. Klausner, Olusegun O. Soge +2 more

Differential DNA accessibility to polymerase enables 30-minute phenotypic β-lactam antibiotic susceptibility testing of carbapenem-resistant Enterobacteriaceae

PLoS Biology(2020)10.1371/journal.pbio.3000652

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0DataRank · unranked

10 citations

Eric J. Liaw, Alexander Viloria Winnett, Emily S. Savela, Omai B. Garner, Rustem F. Ismagilov +1 more

Two-phase wash to solve the ubiquitous contaminant-carryover problem in commercial nucleic-acid extraction kits

Scientific Reports(2020)10.1038/s41598-020-58586-3

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0DataRank · unranked

23 citations

Daan Witters, Rustem F. Ismagilov, Erik Jue

SARS-CoV-2 Viral Load in Saliva Rises Gradually and to Moderate Levels in Some Humans

medRxiv(2020)10.1101/2020.12.09.20239467

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0DataRank · unranked

31 citations

Matthew M. Cooper, Natasha Shelby, Anna E. Romano, Jessica A. Reyes, Jenny Ji +9 more

A Quantitative Sequencing Framework for Absolute Abundance Measurements of Mucosal and Lumenal Microbial Communities

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.28.970087

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0DataRank · unranked

15 citations

Said R. Bogatyrev, Rustem F. Ismagilov, Jacob T. Barlow

A single-cell method to map higher-order 3D genome organization in thousands of individual cells reveals structural heterogeneity in mouse ES cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.11.242081

N/A

0DataRank · unranked

15 citations

Joanna W. Jachowicz, Noah Ollikainen, Matthew S. Curtis, Charlotte Lai, Sofia A. Quinodoz +4 more

Commercial stocks of SARS-CoV-2 RNA may report low concentration values, leading to artificially increased apparent sensitivity of diagnostic assays

medRxiv(2020)10.1101/2020.04.28.20077602

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0DataRank · unranked

7 citations

Rustem F. Ismagilov, Erik Jue

Early Mucosal Type II Interferon Limits SARS-CoV-2 Replication in Humans

CaltechDATA(2020)10.22002/fh69y-nef75

N/A

0DataRank · unranked

0 citations

Alexandra Tabachnikova, Jonathan Chen, Kerrie Greene, Anna E. Romano, Xinyue Penny Pei +14 more

Early Mucosal Type II Interferon Limits SARS-CoV-2 Replication in Humans

CaltechDATA(2020)10.22002/4b9hv-76z96

N/A

0DataRank · unranked

0 citations

Alexandra Tabachnikova, Jonathan Chen, Kerrie Greene, Anna E. Romano, Xinyue Penny Pei +14 more

Early Mucosal Type II Interferon Limits SARS-CoV-2 Replication in Humans

(2020)10.22002/krbp7-h5z17

N/A

0DataRank · unranked

0 citations

Alexandra Tabachnikova, Jonathan Chen, Kerrie Greene, Anna E. Romano, Xinyue Penny Pei +14 more

Single-cell measurement of higher-order 3D genome organization with scSPRITE

Nature Biotechnology(2021)10.1038/s41587-021-00998-1

N/A

0DataRank · unranked

137 citations

Joanna W. Jachowicz, Noah Ollikainen, Matthew S. Curtis, Charlotte Lai, Sofia A. Quinodoz +4 more

Alterations in the gut microbiota contribute to cognitive impairment induced by the ketogenic diet and hypoxia

Cell Host & Microbe(2021)10.1016/j.chom.2021.07.004

N/A

0DataRank · unranked

126 citations

Alonso J. Iñiguez, Grace Yang, Ping Fang, Geoffrey N. Pronovost, Kelly G. Jameson +6 more

Quantitative sequencing clarifies the role of disruptor taxa, oral microbiota, and strict anaerobes in the human small-intestine microbiome

Microbiome(2021)10.1186/s40168-021-01162-2

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0DataRank · unranked

94 citations

Gabriela Leite, Anna E. Romano, Rashin Sedighi, C. Y. Chang, Shreya Celly +5 more

Quantitative SARS-CoV-2 Viral-Load Curves in Paired Saliva Samples and Nasal Swabs Inform Appropriate Respiratory Sampling Site and Analytical Test Sensitivity Required for Earliest Viral Detection

Journal of Clinical Microbiology(2021)10.1128/jcm.01785-21

N/A

0DataRank · unranked

94 citations

Alexander Viloria Winnett, Anna E. Romano, Michael K. Porter, Natasha Shelby, Reid Akana +11 more

Quantitative SARS-CoV-2 viral-load curves in paired saliva and nasal swabs inform appropriate respiratory sampling site and analytical test sensitivity required for earliest viral detection

medRxiv(2021)10.1101/2021.04.02.21254771

N/A

0DataRank · unranked

30 citations

Alexander Viloria Winnett, Anna E. Romano, Michael K. Porter, Natasha Shelby, Reid Akana +11 more

GATA4 regionalizes intestinal metabolism and barrier function to prevent immunopathology

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.28.466194

N/A

0DataRank · unranked

1 citations

Wioletta Lisicka, Joseph Sifakis, Raúl Aguirre‐Gamboa, Anita Kowalczyk, Jacob T. Barlow +14 more

Microbial-enrichment method enables high-throughput metagenomic characterization from host-rich samples

Nature Methods(2023)10.1038/s41592-023-02025-4

N/A

0DataRank · unranked

36 citations

Jacob T. Barlow, Florian Trigodet, Dustin G. Shaw, Anna E. Romano, Bana Jabrì +3 more

GATA4 controls regionalization of tissue immunity and commensal-driven immunopathology

Immunity(2023)10.1016/j.immuni.2022.12.009

N/A

0DataRank · unranked

33 citations

Wioletta Lisicka, Joseph Sifakis, Raúl Aguirre‐Gamboa, Anita Kowalczyk, Jacob T. Barlow +14 more

The ratio between SARS-CoV-2 RNA viral load and culturable viral titer differs depending on stage of infection

medRxiv(2023)10.1101/2023.07.06.23292300

N/A

0DataRank · unranked

0 citations

Alexander Viloria Winnett, Linhui Hao, Natasha Shelby, Jessica A. Reyes, Noah W. Schlenker +7 more

Immunoglobulin A controls intestinal virus colonization to preserve immune homeostasis

Cell Host & Microbe(2025)10.1016/j.chom.2025.03.004

N/A

0DataRank · unranked

17 citations

Zachary M. Earley, Joseph Sifakis, Steven A. Erickson, Jonathan R. Mattingly, Natalie J. Wu-Woods +8 more

Inducible, but not constitutive, pancreatic REG/Reg isoforms are regulated by intestinal microbiota and pancreatic diseases

Mucosal Immunology(2025)10.1016/j.mucimm.2025.05.003

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0DataRank · unranked

3 citations

Macy R. Komnick, Fabiola Sepulveda, Grace Liu, Elida Nieves-Ortiz, Kelsey Meador +13 more

COVID-19 study quantifying daily viral loads confirms throat samples are key to early diagnosis

Diagnostic Microbiology and Infectious Disease(2025)10.1016/j.diagmicrobio.2025.116742

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0DataRank · unranked

1 citations

Natasha Shelby, Rustem F. Ismagilov, Alexander Viloria Winnett

The ratio between SARS-CoV-2 RNA viral load and culturable viral titre differs depending on the stage of infection: a case study of household transmission in an adult male

Access Microbiology(2025)10.1099/acmi.0.000732.v3

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0DataRank · unranked

1 citations

Alexander Viloria Winnett, Linhui Hao, Natasha Shelby, Jessica A. Reyes, Noah W. Schlenker +7 more

Real-time kinetics and high-resolution melt curves in single-molecule digital LAMP to differentiate and study specific and non-specific amplification

Nucleic Acids Research(2020)10.1093/nar/gkaa099

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0DataRank · unranked

208 citations

Erik Jue, Jacob T. Barlow, Rustem F. Ismagilov, Justin C. Rolando

The ratio between SARS-CoV-2 RNA viral load and culturable viral titer differs depending on stage of infection: case study of household transmission in an adult male

(2025)10.1099/acmi.0.000732.v2

N/A

0DataRank · unranked

0 citations

Alexander Viloria Winnett, Linhui Hao, Natasha Shelby, Jessica A. Reyes, Noah W. Schlenker +7 more