🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Michael Alonge

Johns Hopkins University

ORCID: 0000-0002-3692-1819

Also affiliated with APT Therapeutics (United States)

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
15.4Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The complete sequence of a human genome

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.26.445798
Top 2%
8.2DataRank
Top 2%182 citations

Sergey Koren, Arang Rhie, Allison A. Regier, Andrey V. Bzikadze, Alla Mikheenko +97 more

Papers

Driven by 12 papers — median percentile 97. Top paper: “The complete sequence of a human genome”.

The complete sequence of a human genome

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.26.445798
Top 2%
8.2DataRank
Top 2%182 citations

Sergey Koren, Arang Rhie, Allison A. Regier, Andrey V. Bzikadze, Alla Mikheenko +97 more

The complete sequence of a human genome

Science(2022)10.1126/science.abj6987
Top 3%
7.0DataRank
Top 3%3361 citations

Sergey Koren, Arang Rhie, Allison A. Regier, Andrey V. Bzikadze, Alla Mikheenko +94 more

Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome

Nature Biotechnology(2019)10.1038/s41587-019-0217-9
N/A
1.1DataRank · unranked
1912 citations

Paul Peluso, William J. Rowell, Pi-Chuan Chang, Richard J. Hall, Gregory T. Concepcion +24 more

Major Impacts of Widespread Structural Variation on Gene Expression and Crop Improvement in Tomato

Cell(2020)10.1016/j.cell.2020.05.021
N/A
1.0DataRank · unranked
858 citations

Xingang Wang, Matthias Benoit, Sebastian Soyk, Lara Pereira, Lei Zhang +30 more

Chromosome-scale assembly of the bread wheat genome, Triticum aestivum , reveals over 5700 new genes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.06.028746
Top 59%
0.256DataRank
Top 59%3 citations

Alaina Shumate, Daniela Puiu, Aleksey V. Zimin, Steven L. Salzberg, Michael Alonge

The genetic and epigenetic landscape of the Arabidopsis centromeres

Science(2021)10.1126/science.abi7489
N/A
0DataRank · unranked
476 citations

Michael Alonge, Piotr Włodzimierz, Andrew J. Tock, Bradley W. Abramson, Anna Schmücker +19 more

Automated assembly scaffolding elevates a new tomato system for high-throughput genome editing

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.18.469135
N/A
0DataRank · unranked
106 citations

Ludivine Lebeigle, Melanie Kirsche, Sergey Aganezov, Xingang Wang, Zachary B. Lippman +3 more

Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies

Research Square(2021)10.21203/rs.3.rs-712747/v1
N/A
0DataRank · unranked
20 citations

Ann M. Mc Cartney, Kishwar Shafin, Michael Alonge, Andrey V. Bzikadze, Giulio Formenti +15 more

Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.02.450803
N/A
0DataRank · unranked
16 citations

Kishwar Shafin, Michael Alonge, Andrey V. Bzikadze, Giulio Formenti, Arkarachai Fungtammasan +15 more

Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing

Genome biology(2022)10.1186/s13059-022-02823-7
N/A
0DataRank · unranked
960 citations

Ludivine Lebeigle, Melanie Kirsche, Katie Jenike, Shujun Ou, Sergey Aganezov +5 more

Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies

Nature Methods(2022)10.1038/s41592-022-01440-3
N/A
0DataRank · unranked
125 citations

Kishwar Shafin, Michael Alonge, Andrey V. Bzikadze, Giulio Formenti, Arkarachai Fungtammasan +15 more

A master regulator of regeneration

Science(2019)10.1126/science.aaw6258
N/A
0DataRank · unranked
0 citations

Michael C. Schatz, Michael Alonge