🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Yunfan Fan

Johns Hopkins University

ORCID: 0000-0002-3765-5313

Also affiliated with Bristol-Myers Squibb (Germany), Tianjin Economic-Technological Development Area, Bristol-Myers Squibb (United States), Chongqing Public Health Medical Center

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile
0.459Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Genome and transcriptome of a pathogenic yeast, Candida nivariensis

G3 Genes Genomes Genetics(2021)10.1093/g3journal/jkab137
Top 61%
0.238DataRank
Top 61%3 citations

Andrew N. Gale, Anna Bailey, Kali Barnes, Kiersten Colotti, Michal Mass +6 more

Papers

Driven by 14 papers — median percentile 19. Top paper: “Genome and transcriptome of a pathogenic yeast, Candida nivariensis”.

Genome and transcriptome of a pathogenic yeast, Candida nivariensis

G3 Genes Genomes Genetics(2021)10.1093/g3journal/jkab137
Top 61%
0.238DataRank
Top 61%3 citations

Andrew N. Gale, Anna Bailey, Kali Barnes, Kiersten Colotti, Michal Mass +6 more

De novo genome assembly of the Tobacco Hornworm moth ( Manduca sexta )

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.29.270983
Top 63%
0.221DataRank
Top 63%2 citations

Tatiana Gelaf Romer, Yunfan Fan, Roham Razaghi, Wendy A. Smith, Winston Timp +1 more

A plasmid locus associated with Klebsiella clinical infections encodes a microbiome-dependent gut fitness factor

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.26.963322
N/A
0DataRank · unranked
1 citations

Christine M. Bassis, Srividya Ramakrishnan, Robert Hein, Sophia Mason, Yehudit Bergman +8 more

A plasmid locus associated with Klebsiella clinical infections encodes a microbiome-dependent gut fitness factor

PLoS Pathogens(2021)10.1371/journal.ppat.1009537
N/A
0DataRank · unranked
50 citations

Christine M. Bassis, Srividya Ramakrishnan, Robert Hein, Sophia Mason, Yehudit Bergman +9 more

Genomic diversity of SARS-CoV-2 during early introduction into the Baltimore–Washington metropolitan area

JCI Insight(2021)10.1172/jci.insight.144350
N/A
0DataRank · unranked
41 citations

Shirlee Wohl, Thomas Mehoke, Srividya Ramakrishnan, Melanie Kirsche, Oluwaseun Falade‐Nwulia +17 more

Genome and transcriptome of a pathogenic yeast, Candida nivariensis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.27.428461
Top 100%
0DataRank
Top 100%0 citations

Andrew N. Gale, Anna Bailey, Kali Barnes, Kiersten Colotti, Michal Mass +6 more

Treatment of Sindbis Virus-Infected Neurons with Antibody to E2 Alters Synthesis of Complete and nsP1-Expressing Defective Viral RNAs

mBio(2022)10.1128/mbio.02221-22
N/A
0DataRank · unranked
2 citations

Yunfan Fan, Maggie L. Bartlett, Xiaoyan Zhang, Norah Sadowski, Debra Hauer +3 more

Similar evolutionary trajectories in an environmental Cryptococcus neoformans isolate after human and murine infection

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2217111120
N/A
0DataRank · unranked
21 citations

Scott A. McConnell, Nina T. Grossman, Rosanna P. Baker, Quigly Dragotakes, Yunfan Fan +15 more

Multicentre genetic diversity study of carbapenem-resistant Enterobacterales: predominance of untypeable pUVA-like blaKPC bearing plasmids

JAC-Antimicrobial Resistance(2023)10.1093/jacamr/dlad061
N/A
0DataRank · unranked
4 citations

Yehudit Bergman, Yunfan Fan, Emily Jacobs, Srividya Ramakrishnan, Jennifer Lu +7 more

Comprehensive Screening of a Light-Inducible Split Cre Recombinase with Domain Insertion Profiling

ACS Synthetic Biology(2023)10.1021/acssynbio.3c00328
N/A
0DataRank · unranked
5 citations

Virgile Andreani, Yunfan Fan, Winston Timp, Mary J. Dunlop, Nathan Tague

Comprehensive screening of a light-inducible split Cre recombinase with domain insertion profiling

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.26.542511
N/A
0DataRank · unranked
3 citations

Virgile Andreani, Yunfan Fan, Winston Timp, Mary J. Dunlop, Nathan Tague

Targeted nanopore sequencing by real-time mapping of raw electrical signal with UNCALLED

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.03.931923
N/A
0DataRank · unranked
51 citations

Yunfan Fan, Bohan Ni, Winston Timp, Michael C. Schatz, Sam Kovaka

Three annotated chromosome-level de novo genome assemblies of Lomentospora prolificans provide evidence for a chromosomal translocation event

G3 Genes Genomes Genetics(2025)10.1093/g3journal/jkaf091
Top 100%
0DataRank
Top 100%0 citations

Yunfan Fan, Aleksey V. Zimin, Maggie P. Wear, Anne Jedlicka, Amanda Dziedzic +4 more

Genomic Diversity of SARS-CoV-2 During Early Introduction into the United States National Capital Region

medRxiv(2020)10.1101/2020.08.13.20174136
N/A
0DataRank · unranked
15 citations

Shirlee Wohl, Thomas Mehoke, Srividya Ramakrishnan, Melanie Kirsche, Oluwaseun Falade‐Nwulia +17 more