🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Xian Chang

University of California, Santa Cruz

ORCID: 0000-0002-3801-4542
Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
5.5Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A draft human pangenome reference

Nature(2023)10.1038/s41586-023-05896-x
Top 4%
5.1DataRank
Top 4%1169 citations

Mobin Asri, Jana Ebler, Daniel Doerr, Marina Haukness, Hickey, Glenn +95 more

Papers

Driven by 12 papers — median percentile 73. Top paper: “A draft human pangenome reference”.

A draft human pangenome reference

Nature(2023)10.1038/s41586-023-05896-x
Top 4%
5.1DataRank
Top 4%1169 citations

Mobin Asri, Jana Ebler, Daniel Doerr, Marina Haukness, Hickey, Glenn +95 more

Pangenome graph construction from genome alignments with Minigraph-Cactus

Nature Biotechnology(2023)10.1038/s41587-023-01793-w
N/A
5.0DataRank · unranked
318 citations

Jean Monlong, Jana Ebler, Adam M. Novak, Jordan M. Eizenga, Yan Gao +94 more

A strategy for building and using a human reference pangenome

F1000Research(2021)10.12688/f1000research.19630.2
N/A
0.533DataRank · unranked
10 citations

Giuseppe Narzisi, Valérie Schneider, Peter A. Audano, Evan Biederstedt, Lon Blauvelt +35 more

Pan-conserved segment tags identify ultra-conserved sequences across assemblies in the human pangenome

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100543
Top 50%
0.352DataRank
Top 50%6 citations

Stephanie Greer, Dmitri S. Pavlichin, Bo Zhou, Alexander E. Urban, Tsachy Weissman +94 more

Haplotype-aware pantranscriptome analyses using spliced pangenome graphs

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.26.437240
N/A
0DataRank · unranked
18 citations

Jordan M. Eizenga, Adam M. Novak, Jouni Sirén, Xian Chang, Erik Garrison +2 more

Haplotype-aware pantranscriptome analyses using spliced pangenome graphs

Nature Methods(2023)10.1038/s41592-022-01731-9
N/A
0DataRank · unranked
82 citations

Jordan M. Eizenga, Adam M. Novak, Jouni Sirén, Xian Chang, Erik Garrison +2 more

Personalized Pangenome References

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.13.571553
N/A
0DataRank · unranked
4 citations

Parsa Eskandar, Matteo Tommaso Ungaro, Hickey, Glenn, Jordan M. Eizenga, Adam M. Novak +7 more

Pangenome Graphs

Annual Review of Genomics and Human Genetics(2020)10.1146/annurev-genom-120219-080406
N/A
0DataRank · unranked
355 citations

Adam M. Novak, Jonas A. Sibbesen, Simon Heumos, Ali Ghaffaari, Hickey, Glenn +11 more

Personalized pangenome references

Nature Methods(2024)10.1038/s41592-024-02407-2
N/A
0DataRank · unranked
30 citations

Parsa Eskandar, Matteo Tommaso Ungaro, Hickey, Glenn, Jordan M. Eizenga, Adam M. Novak +7 more

Distance indexing and seed clustering in sequence graphs

Bioinformatics(2020)10.1093/bioinformatics/btaa446
N/A
0DataRank · unranked
20 citations

Jordan M. Eizenga, Adam M. Novak, Jouni Sirén, Benedict Paten, Xian Chang

Genotyping common, large structural variations in 5,202 genomes using pangenomes, the Giraffe mapper, and the vg toolkit

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.04.412486
N/A
0DataRank · unranked
30 citations

Jean Monlong, Xian Chang, Adam M. Novak, Jordan M. Eizenga, Charles Markello +15 more

Pangenomics enables genotyping of known structural variants in 5202 diverse genomes

Science(2021)10.1126/science.abg8871
N/A
0DataRank · unranked
419 citations

Jean Monlong, Xian Chang, Adam M. Novak, Jordan M. Eizenga, Charles Markello +15 more