Karla M. Neugebauer

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 32 papers. Top paper: “Maternal respiratory SARS-CoV-2 infection in pregnancy is associated with a robust inflammatory response at the maternal-fetal interface”.

Maternal respiratory SARS-CoV-2 infection in pregnancy is associated with a robust inflammatory response at the maternal-fetal interface

Med(2021)10.1016/j.medj.2021.04.016

N/A

0.806DataRank · unranked

215 citations

Arun R. Chavan, Pavithra Vijayakumar, Lina Irshaid, Edward Courchaine, Kristin M. Milano +26 more

Phosphorylation of the nuclear poly(A) binding protein (PABPN1) during mitosis protects mRNA from hyperadenylation and maintains transcriptome dynamics

Nucleic Acids Research(2024)10.1093/nar/gkae562

N/A

0.381DataRank · unranked

7 citations

David V. Phizicky, Leonard Schärfen, Courtney L Brown, Dahyana Arias Escayola, Jean Kanyo +4 more

The exon junction complex coordinates the cotranscriptional inclusion of blocks of neighboring exons

Genes & Development(2025)10.1101/gad.353081.125

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0.241DataRank · unranked

4 citations

Jackson M. Gordon, Matthew R. Gazzara, Chuan-Tien Hung, Benhur Lee, Yoseph Barash +2 more

DMA-tudor interaction modules control the specificity of in vivo condensates

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.15.297994

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0DataRank · unranked

1 citations

Andrew E. S. Barentine, Korinna Straube, Joerg Bewersdorf, Karla M. Neugebauer, Edward Courchaine

Co-transcriptional splicing regulates 3′ end cleavage during mammalian erythropoiesis

Molecular Cell(2021)10.1016/j.molcel.2020.12.018

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0DataRank · unranked

194 citations

Claudia A. Mimoso, Karen Adelman, Karla M. Neugebauer, Kirsten A. Reimer

DMA-tudor interaction modules control the specificity of in vivo condensates

Cell(2021)10.1016/j.cell.2021.05.008

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0DataRank · unranked

78 citations

Andrew E. S. Barentine, Korinna Straube, Dong‐Ryoung Lee, Joerg Bewersdorf, Karla M. Neugebauer +1 more

Transcription Regulation Through Nascent RNA Folding

Journal of Molecular Biology(2021)10.1016/j.jmb.2021.166975

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0DataRank · unranked

60 citations

Karla M. Neugebauer, Leonard Schärfen

Generation of scalable cancer models by combining AAV-intron-trap, CRISPR/Cas9, and inducible Cre-recombinase

Communications Biology(2021)10.1038/s42003-021-02690-1

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0DataRank · unranked

10 citations

Abhishek Gupta, Jung‐Sik Kim, Karla M. Neugebauer, Todd Waldman, Manoj M. Pillai +1 more

SARS-CoV-2 infection in pregnancy is associated with robust inflammatory response at the maternal-fetal interface

medRxiv(2021)10.1101/2021.01.25.21250452

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0DataRank · unranked

34 citations

Arun R. Chavan, Pavithra Vijayakumar, Lina Irshaid, Edward Courchaine, Kristin M. Milano +27 more

Integrative genome-wide analysis reveals EIF3A as a key downstream regulator of translational repressor protein Musashi 2 (MSI2)

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.06.428911

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0DataRank · unranked

3 citations

Oscar Ramirez, Kiran Paul, Abhishek Gupta, Valentina Botti, Igor Ruiz de los Mozos +5 more

Multi-omics profiling of U2AF1 mutants dissects pathogenic mechanisms affecting RNA granules in myeloid malignancies

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.22.441020

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0DataRank · unranked

3 citations

Poorval Joshi, Joshua T. Zimmer, Torben Hunck, Yimeng Gao, Mark D. Lessard +18 more

Coilin oligomerization and remodeling by Nopp140 reveals a hybrid assembly mechanism for Cajal bodies

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.01.454609

N/A

0DataRank · unranked

0 citations

Martin Machyna, Korinna Straube, Sarah Sauyet, Jade Enright, Karla M. Neugebauer +1 more

Precision analysis of mutant U2AF1 activity reveals deployment of stress granules in myeloid malignancies

Molecular Cell(2022)10.1016/j.molcel.2022.02.025

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0DataRank · unranked

83 citations

Poorval Joshi, Joshua T. Zimmer, Torben Hunck, Yimeng Gao, Mark D. Lessard +18 more

The coilin N-terminus mediates multivalent interactions between coilin and Nopp140 to form and maintain Cajal bodies

Nature Communications(2022)10.1038/s41467-022-33434-2

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0DataRank · unranked

33 citations

Sara Gelles-Watnick, Martin Machyna, Korinna Straube, Sarah Sauyet, Jade Enright +2 more

Identification of Alternative Polyadenylation in Cyanidioschyzon merolae Through Long-Read Sequencing of mRNA

Frontiers in Genetics(2022)10.3389/fgene.2021.818697

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0DataRank · unranked

13 citations

Dagmar Zigáčková, Kirsten A. Reimer, Martha R. Stark, Viktor Slat, Nancy Francoeur +6 more

Integrative genome-wide analysis reveals EIF3A as a key downstream regulator of translational repressor protein Musashi 2 (MSI2)

NAR Cancer(2022)10.1093/narcan/zcac015

N/A

0DataRank · unranked

18 citations

Oscar Ramirez, Kiran Paul, Abhishek Gupta, Vandana Kumari, Valentina Botti +7 more

An integrated platform for high-throughput nanoscopy

Nature Biotechnology(2023)10.1038/s41587-023-01702-1

N/A

0DataRank · unranked

65 citations

Yu Lin, Edward M. Courvan, P. Kidd, Miao Liu, Leonhard Balduf +11 more

Tudor–dimethylarginine interactions: the condensed version

Trends in Biochemical Sciences(2023)10.1016/j.tibs.2023.04.003

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0DataRank · unranked

16 citations

Sara Gelles-Watnick, Karla M. Neugebauer, Daniela Šimčíková

The promoter as a trip navigator: Guiding alternative polyadenylation site destinations

Molecular Cell(2023)10.1016/j.molcel.2023.06.022

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0DataRank · unranked

5 citations

Karla M. Neugebauer, Alexandra Bergfort

Co-transcriptional gene regulation in eukaryotes and prokaryotes

Nature Reviews Molecular Cell Biology(2024)10.1038/s41580-024-00706-2

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0DataRank · unranked

97 citations

Jackson M. Gordon, Leonard Schärfen, Dagmar Zigáčková, Lydia Herzel, Karla M. Neugebauer +1 more

Steering research on mRNA splicing in cancer towards clinical translation

Nature reviews. Cancer(2024)10.1038/s41568-024-00750-2

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0DataRank · unranked

40 citations

Frédéric H.‐T. Allain, Brittany Angarola, Douglas L. Black, Angela N. Brooks, Chonghui Cheng +14 more

Transcription elongation defects link oncogenic SF3B1 mutations to targetable alterations in chromatin landscape

Molecular Cell(2024)10.1016/j.molcel.2024.02.032

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0DataRank · unranked

38 citations

Abhishek Gupta, Rahul Roy, Bárbara de la Peña Avalos, Anne Olazabal‐Herrero, Nils Neuenkirchen +13 more

Emerging and re-emerging themes in co-transcriptional pre-mRNA splicing

Molecular Cell(2024)10.1016/j.molcel.2024.08.036

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0DataRank · unranked

35 citations

Karla M. Neugebauer, Tucker J. Carrocci

Multiple roles for AU-rich RNA binding proteins in the development of haematologic malignancies and their resistance to chemotherapy

RNA Biology(2024)10.1080/15476286.2024.2346688

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0DataRank · unranked

13 citations

Karla M. Neugebauer, Paulina Podszywalow‐Bartnicka

Identification of coilin interactors reveals coordinated control of Cajal body number and structure

The Journal of Cell Biology(2024)10.1083/jcb.202305081

N/A

0DataRank · unranked

8 citations

Chuyue Zhang, Emily Nischwitz, Leonard Schärfen, Kerstin Dörner, Korinna Straube +4 more

Rapid folding of nascent RNA regulates eukaryotic RNA biogenesis

Molecular Cell(2025)10.1016/j.molcel.2025.02.025

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0DataRank · unranked

13 citations

Isaac W. Vock, Matthew D. Simon, Karla M. Neugebauer, Leonard Schärfen

Dynamic interaction of spliceosomal snRNPs with coilin explains Cajal body characteristics

The Journal of Cell Biology(2025)10.1083/jcb.202309128

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0DataRank · unranked

2 citations

Michaela Blažíková, Adriana Roithová, Martina Hálová, Nenad Radivojević, Karla M. Neugebauer +2 more

Transcriptional readthrough precedes alternative splicing programs triggered in CML cells by imatinib

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.04.686193

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0DataRank · unranked

1 citations

Morgan Shine, Jing Lin, Karla M. Neugebauer, Paulina Podszywalow‐Bartnicka

Nuclear mechanisms of gene expression control: pre-mRNA splicing as a life or death decision

Current Opinion in Genetics & Development(2020)10.1016/j.gde.2020.11.002

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0DataRank · unranked

63 citations

David V. Phizicky, Karla M. Neugebauer, Jackson M. Gordon

Long-read Sequencing of Nascent RNA from Budding and Fission Yeasts

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.06.680282

N/A

0DataRank · unranked

0 citations

Tara Alpert, Kirsten A. Reimer, Pernille Bech, Lydia Herzel, Leonard Schärfen +3 more

Widespread Transcriptional Readthrough Caused by Nab2 Depletion Leads to Chimeric Transcripts with Retained Introns

Cell Reports(2020)10.1016/j.celrep.2020.108324

N/A

0DataRank · unranked

46 citations

Korinna Straube, Fernando Carrillo Oesterreich, Lydia Herzel, Karla M. Neugebauer, Tara Alpert

Preparation of Mammalian Nascent RNA for Long Read Sequencing

Current Protocols in Molecular Biology(2020)10.1002/cpmb.128

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0DataRank · unranked

13 citations

Karla M. Neugebauer, Kirsten A. Reimer