Kirk E. Lohmueller

Also affiliated with Evolutionary Genomics (United States)

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.0Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

High-quality genome and methylomes illustrate features underlying evolutionary success of oaks

Nature Communications(2022)10.1038/s41467-022-29584-y

Top 12%

1.8DataRank

Top 12%81 citations

Shawn Cokus, Sorel Fitz‐Gibbon, Aleksey V. Zimin, Daniela Puiu, Jesse A. Garcia +7 more

Papers

Driven by 48 papers — median percentile 39. Top paper: “High-quality genome and methylomes illustrate features underlying evolutionary success of oaks”.

High-quality genome and methylomes illustrate features underlying evolutionary success of oaks

Nature Communications(2022)10.1038/s41467-022-29584-y

Top 12%

1.8DataRank

Top 12%81 citations

Shawn Cokus, Sorel Fitz‐Gibbon, Aleksey V. Zimin, Daniela Puiu, Jesse A. Garcia +7 more

A community-maintained standard library of population genetic models

eLife(2020)10.7554/elife.54967

N/A

0.835DataRank · unranked

260 citations

C. B. Cole, Noah Dukler, Jared Galloway, Ariella Gladstein, Graham Gower +24 more

Accessible, Realistic Genome Simulation with Selection Using stdpopsim

Molecular Biology and Evolution(2025)10.1093/molbev/msaf236

N/A

0.312DataRank · unranked

7 citations

Nathaniel S. Pope, Murillo F. Rodrigues, Silas Tittes, Linh N. Tran, Ornob Alam +26 more

Inferring the mode and strength of ongoing selection

Genome Research(2023)10.1101/gr.276386.121

Top 61%

0.241DataRank

Top 61%4 citations

Kirk E. Lohmueller, Gustavo Valadares Barroso

A signature of Neanderthal introgression on molecular mechanisms of environmental responses

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.15.435179

N/A

0.165DataRank · unranked

2 citations

Xinjun Zhang, Carly Boye, Yen‐Lung Lin, Cynthia A. Kalita, Luis B. Barreiro +4 more

The impact of non-neutral synonymous mutations when inferring selection on nonsynonymous mutations

Genetics(2025)10.1093/genetics/iyaf200

N/A

0.104DataRank · unranked

1 citations

Christopher C. Kyriazis, Kirk E. Lohmueller, Aina Zurita Martinez

Genome-wide patterns of de novo tandem repeat mutations and their contribution to autism spectrum disorders

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.04.974170

N/A

0DataRank · unranked

5 citations

Bonnie Huang, Nima Mousavi, Nichole Ma, Michael Lamkin, Richard Yanicky +4 more

Recessive deleterious variation has a limited impact on signals of adaptive introgression in human populations

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.13.905174

N/A

0DataRank · unranked

1 citations

Bernard Kim, Kirk E. Lohmueller, Emilia Huerta‐Sánchez, Xinjun Zhang

The impact of identity-by-descent on fitness and disease in natural and domesticated Canid populations

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.16.385443

N/A

0DataRank · unranked

1 citations

Abigail Yohannes, Kirk E. Lohmueller, Jazlyn A. Mooney

Patterns of de novo tandem repeat mutations and their role in autism

Nature(2021)10.1038/s41586-020-03078-7

N/A

0DataRank · unranked

220 citations

Bonnie Huang, Nima Mousavi, Nichole Ma, Michael Lamkin, Richard Yanicky +4 more

Negative linkage disequilibrium between amino acid changing variants reveals interference among deleterious mutations in the human genome

PLoS Genetics(2021)10.1371/journal.pgen.1009676

N/A

0DataRank · unranked

33 citations

Kirk E. Lohmueller, Jesse A. Garcia

A signature of Neanderthal introgression on molecular mechanisms of environmental responses

PLoS Genetics(2021)10.1371/journal.pgen.1009493

N/A

0DataRank · unranked

14 citations

Xinjun Zhang, Carly Boye, Yen‐Lung Lin, Cynthia A. Kalita, Luis B. Barreiro +4 more

Inferring the mode and strength of ongoing selection

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.08.463705

Top 100%

0DataRank

Top 100%0 citations

Kirk E. Lohmueller, Gustavo Valadares Barroso

The critically endangered vaquita is not doomed to extinction by inbreeding depression

Science(2022)10.1126/science.abm1742

N/A

0DataRank · unranked

150 citations

Christopher C. Kyriazis, Sergio F. Nigenda‐Morales, Annabel C. Beichman, Lorenzo Rojas‐Bracho, Kelly M. Robertson +6 more

Deleterious Variation in Natural Populations and Implications for Conservation Genetics

Annual Review of Animal Biosciences(2022)10.1146/annurev-animal-080522-093311

N/A

0DataRank · unranked

148 citations

Christopher C. Kyriazis, Stella Yuan, Kirk E. Lohmueller, Jacqueline A. Robinson

On the prospect of achieving accurate joint estimation of selection with population history

Genome Biology and Evolution(2022)10.1093/gbe/evac088

N/A

0DataRank · unranked

64 citations

Adam Eyre‐Walker, Ryan N. Gutenkunst, Kirk E. Lohmueller, Jeffrey D. Jensen, Parul Johri

Haplotype-based inference of the distribution of fitness effects

Genetics(2022)10.1093/genetics/iyac002

N/A

0DataRank · unranked

6 citations

Kirk E. Lohmueller, John Novembre, Diego Ortega‐Del Vecchyo

Using computational simulations to quantify genetic load and predict extinction risk

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.12.503792

N/A

0DataRank · unranked

26 citations

Jacqueline A. Robinson, Kirk E. Lohmueller, Christopher C. Kyriazis

Quantifying the fraction of new mutations that are recessive lethal

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.22.489225

N/A

0DataRank · unranked

6 citations

Christopher C. Kyriazis, Maria Izabel A. Cavassim, Kirk E. Lohmueller, Emma E. Wade

Genome-wide selection inference at short tandem repeats

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.12.491726

N/A

0DataRank · unranked

4 citations

Arun Durvasula, Nima Mousavi, Helyaneh Ziaei-Jam, Mikhail O. Maksimov, Kirk E. Lohmueller +2 more

MaLAdapt reveals novel targets of adaptive introgression from Neanderthals and Denisovans in worldwide human populations

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.16.491756

N/A

0DataRank · unranked

0 citations

Bernard Kim, Armaan Singh, Sriram Sankararaman, Arun Durvasula, Kirk E. Lohmueller +1 more

Using Computational Simulations to Model Deleterious Variation and Genetic Load in Natural Populations

The American Naturalist(2023)10.1086/726736

N/A

0DataRank · unranked

41 citations

Jacqueline A. Robinson, Kirk E. Lohmueller, Christopher C. Kyriazis

The genomic footprint of whaling and isolation in fin whale populations

Nature Communications(2023)10.1038/s41467-023-40052-z

N/A

0DataRank · unranked

32 citations

Meixi Lin, Paulina G. Nuñez-Valencia, Christopher C. Kyriazis, Annabel C. Beichman, Jacqueline A. Robinson +10 more

MaLAdapt Reveals Novel Targets of Adaptive Introgression From Neanderthals and Denisovans in Worldwide Human Populations

Molecular Biology and Evolution(2023)10.1093/molbev/msad001

N/A

0DataRank · unranked

34 citations

Bernard Kim, Armaan Singh, Sriram Sankararaman, Arun Durvasula, Kirk E. Lohmueller +1 more

Genomic Underpinnings of Population Persistence in Isle Royale Moose

Molecular Biology and Evolution(2023)10.1093/molbev/msad021

N/A

0DataRank · unranked

34 citations

Annabel C. Beichman, Kristin E. Brzeski, Sarah R. Hoy, Rolf O. Peterson, John A. Vucetich +4 more

Quantifying the fraction of new mutations that are recessive lethal

Evolution(2023)10.1093/evolut/qpad061

N/A

0DataRank · unranked

18 citations

Christopher C. Kyriazis, Maria Izabel A. Cavassim, Kirk E. Lohmueller, Emma E. Wade

Models based on best-available information support a low inbreeding load and potential for recovery in the vaquita

Heredity(2023)10.1038/s41437-023-00608-7

N/A

0DataRank · unranked

10 citations

Jacqueline A. Robinson, Sergio F. Nigenda‐Morales, Annabel C. Beichman, Lorenzo Rojas‐Bracho, Kelly M. Robertson +6 more

Inference of the demographic histories and selective effects of human gut commensal microbiota over the course of human history

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.09.566454

N/A

0DataRank · unranked

4 citations

Kirk E. Lohmueller, Nandita R. Garud, Jonathan C. Mah

The influence of gene flow on population viability in an isolated urban caracal population

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.20.549918

N/A

0DataRank · unranked

3 citations

Laurel E. K. Serieys, Jacqueline M. Bishop, Marine Drouilly, Storme Viljoen, Robert K. Wayne +2 more

Revisiting Dominance in Population Genetics

Genome Biology and Evolution(2024)10.1093/gbe/evae147

N/A

0DataRank · unranked

19 citations

Kirk E. Lohmueller, Chenlu Di

The influence of gene flow on population viability in an isolated urban caracal population

Molecular Ecology(2024)10.1111/mec.17346

N/A

0DataRank · unranked

17 citations

Laurel E. K. Serieys, Jacqueline M. Bishop, Marine Drouilly, Storme Viljoen, Robert K. Wayne +2 more

Admix-kit: an integrated toolkit and pipeline for genetic analyses of admixed populations

Bioinformatics(2024)10.1093/bioinformatics/btae148

N/A

0DataRank · unranked

16 citations

Stephanie M. Gogarten, Joohyun Kim, Xing Hua, Julie‐Alexia Dias, Quan Sun +89 more

Constraining models of dominance for nonsynonymous mutations in the human genome

PLoS Genetics(2024)10.1371/journal.pgen.1011198

N/A

0DataRank · unranked

9 citations

Kirk E. Lohmueller, Christopher C. Kyriazis

Constraining models of dominance for nonsynonymous mutations in the human genome

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.25.582010

N/A

0DataRank · unranked

3 citations

Kirk E. Lohmueller, Christopher C. Kyriazis

The impact of non-neutral synonymous mutations when inferring selection on non-synonymous mutations

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.07.579314

N/A

0DataRank · unranked

2 citations

Christopher C. Kyriazis, Kirk E. Lohmueller, Aina Martinez i Zurita

Evolutionary consequences of domestication on the selective effects of new amino acid changing mutations in canids

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.13.623529

N/A

0DataRank · unranked

1 citations

Chenlu Di, Meixi Lin, Clare D. Marsden, Christina A. Del Carpio, Jonathan C. Mah +6 more

Long runs of homozygosity are reliable genomic markers of inbreeding depression

Trends in Ecology & Evolution(2025)10.1016/j.tree.2025.06.013

N/A

0DataRank · unranked

26 citations

Jacqueline A. Robinson, Kirk E. Lohmueller, Christopher C. Kyriazis

Genetic rescue of Florida panthers reduced homozygosity but did not swamp ancestral genotypes

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2410945122

N/A

0DataRank · unranked

15 citations

Lin Yuan, Yulin Zhang, Alexander Ochoa, Melanie Culver, Robert R. Fitak +4 more

Inference of the Demographic Histories and Selective Effects of Human Gut Commensal Microbiota Over the Course of Human History

Molecular Biology and Evolution(2025)10.1093/molbev/msaf010

N/A

0DataRank · unranked

5 citations

Kirk E. Lohmueller, Nandita R. Garud, Jonathan C. Mah

The landscape of fitness effects of putatively functional noncoding mutations in humans

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.14.654124

N/A

0DataRank · unranked

4 citations

Swetha Ramesh, Jason Ernst, Kirk E. Lohmueller, Chenlu Di

The distribution of fitness effects varies phylogenetically across animals

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.13.653358

N/A

0DataRank · unranked

2 citations

Sneha Chakraborty, Carlos Eduardo G. Amorim, Sergio F. Nigenda‐Morales, Annabel C. Beichman, Paulina G. Nuñez-Valencia +11 more

Strongly deleterious mutations are a primary determinant of extinction risk due to inbreeding depression

Evolution Letters(2020)10.1002/evl3.209

N/A

0DataRank · unranked

284 citations

Robert K. Wayne, Kirk E. Lohmueller, Christopher C. Kyriazis

Genome-wide selection inference at short tandem repeats

PLoS Genetics(2025)10.1371/journal.pgen.1011959

N/A

0DataRank · unranked

0 citations

Arun Durvasula, Nima Mousavi, Helyaneh Ziaei Jam, М. В. Максимов, Kirk E. Lohmueller +2 more

Population genetic models of GERP scores suggest pervasive turnover of constrained sites across mammalian evolution

PLoS Genetics(2020)10.1371/journal.pgen.1008827

N/A

0DataRank · unranked

140 citations

Bernard Kim, Kirk E. Lohmueller, Christian D. Huber

The Impact of Recessive Deleterious Variation on Signals of Adaptive Introgression in Human Populations

Genetics(2020)10.1534/genetics.120.303081

N/A

0DataRank · unranked

45 citations

Bernard Kim, Kirk E. Lohmueller, Emilia Huerta‐Sánchez, Xinjun Zhang

Identification and characterization of constrained non-exonic bases lacking predictive epigenomic and transcription factor binding annotations

Nature Communications(2020)10.1038/s41467-020-19962-9

N/A

0DataRank · unranked

4 citations

Tanya N. Phung, Soo Bin Kwon, A Arneson, Yu‐Ju Lee, Kirk E. Lohmueller +2 more

Greater strength of selection and higher proportion of beneficial amino acid changing mutations in humans compared with mice and Drosophila melanogaster

Genome Research(2020)10.1101/gr.256636.119

N/A

0DataRank · unranked

34 citations

Christian D. Huber, R. W. Davies, Kirk E. Lohmueller, Ying Zhen

Negative linkage disequilibrium between amino acid changing variants reveals interference among deleterious mutations in the human genome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.15.907097

N/A

0DataRank · unranked

8 citations

Kirk E. Lohmueller, Jesse A. Garcia

Kirk E. Lohmueller

Indexed papers

Top data-sharing exemplar

Papers