Da Xu

Also affiliated with University of California, Berkeley

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 10 papers. Top paper: “REGALS: a general method to deconvolve X-ray scattering data from evolving mixtures”.

REGALS: a general method to deconvolve X-ray scattering data from evolving mixtures

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.06.413997

N/A

0DataRank · unranked

1 citations

Da Xu, Nozomi Ando, Steve P. Meisburger

Comprehensive phylogenetic analysis of the ribonucleotide reductase family reveals an ancestral clade and the role of insertions and extensions in diversification

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.23.489257

N/A

0DataRank · unranked

0 citations

Matthew A. Spence, Da Xu, Colin J. Jackson, Nozomi Ando, Audrey A. Burnim

Miffi: Improving the accuracy of CNN-based cryo-EM micrograph filtering with fine-tuning and Fourier space information

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.08.570849

N/A

0DataRank · unranked

0 citations

Nozomi Ando, Da Xu

Miffi: Improving the accuracy of CNN-based cryo-EM micrograph filtering with fine-tuning and Fourier space information

Journal of Structural Biology(2024)10.1016/j.jsb.2024.108072

N/A

0DataRank · unranked

7 citations

Nozomi Ando, Da Xu

CRISPRoff epigenetic editing for programmable gene silencing in human cells without DNA breaks

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.09.612111

N/A

0DataRank · unranked

8 citations

Izaiah J. Ornelas, Carolyn D. Nguyen, Da Xu, Nikita S. Divekar, James K. Nuñez +1 more

Unified Sampling and Ranking for Protein Docking with DFMDock

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.27.615401

N/A

0DataRank · unranked

5 citations

Sudeep Sarma, Da Xu, Jeffrey J. Gray, Lee‐Shin Chu

Programmable epigenome editing by transient delivery of CRISPR epigenome editor ribonucleoproteins

Nature Communications(2025)10.1038/s41467-025-63167-x

N/A

0DataRank · unranked

32 citations

Swen Besselink, Gokul N. Ramadoss, Philip H. Dierks, Justin Lubin, Rithu Pattali +9 more

Cancer cell target discovery: comparing laboratory evolution of expanded DNA six-nucleotide alphabets with standard four-nucleotide alphabets

Nucleic Acids Research(2025)10.1093/nar/gkaf072

N/A

0DataRank · unranked

12 citations

Jun Li, Shuo Wan, Hong Xuan, Jinchen Long, Haiyan Cao +6 more

Conformational landscapes of a class I ribonucleotide reductase complex during turnover reveal intrinsic dynamics and asymmetry

Nature Communications(2025)10.1038/s41467-025-57735-4

N/A

0DataRank · unranked

8 citations

William C. Thomas, Audrey A. Burnim, Nozomi Ando, Da Xu

CRISPRoff epigenome editing for programmable gene silencing in human cell lines and primary T cells

Methods in enzymology on CD-ROM/Methods in enzymology(2025)10.1016/bs.mie.2025.01.010

N/A

0DataRank · unranked

6 citations

Izaiah J. Ornelas, Carolyn D. Nguyen, Da Xu, Nikita S. Divekar, James K. Nuñez +1 more