Xian Adiconis

Also affiliated with Align Technology (United States), Aligning Science Across Parkinson's

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

10.1Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Single-cell transcriptomic profiling of the aging mouse brain

Nature Neuroscience(2019)10.1038/s41593-019-0491-3

Top 4%

5.6DataRank

Top 4%791 citations

Scott L. Lipnick, Brendan T. Innes, Sean K. Simmons, Xian Adiconis, Danielle Dionne +13 more

Papers

Driven by 30 papers — median percentile 94. Top paper: “Single-cell transcriptomic profiling of the aging mouse brain”.

Single-cell transcriptomic profiling of the aging mouse brain

Nature Neuroscience(2019)10.1038/s41593-019-0491-3

Top 4%

5.6DataRank

Top 4%791 citations

Scott L. Lipnick, Brendan T. Innes, Sean K. Simmons, Xian Adiconis, Danielle Dionne +13 more

Comprehensive comparative analysis of 5′-end RNA-sequencing methods

Nature Methods(2018)10.1038/s41592-018-0014-2

N/A

4.3DataRank · unranked

141 citations

Adam L. Haber, Sean K. Simmons, Pradeep Natarajan, Zhe Ji, Michele A. Busby +8 more

Distinct subnetworks of the thalamic reticular nucleus

Nature(2020)10.1038/s41586-020-2504-5

N/A

4.1DataRank · unranked

217 citations

Violeta G. López-Huerta, Xian Adiconis, Kirsten Levandowski, Soonwook Choi, Sean K. Simmons +25 more

Proper acquisition of cell class identity in organoids allows definition of fate specification programs of the human cerebral cortex

Cell(2022)10.1016/j.cell.2022.09.010

Top 6%

3.5DataRank

Top 6%238 citations

Amanda J. Kedaigle, Martina Pigoni, Bruna Paulsen, Xian Adiconis, Kwanho Kim +14 more

Brain Chimeroids reveal individual susceptibility to neurotoxic triggers

Nature(2024)10.1038/s41586-024-07578-8

N/A

2.5DataRank · unranked

90 citations

Irene Faravelli, Tyler Faits, Sophia Andreadis, Sebastiano Trattaro, Xian Adiconis +10 more

Full-length transcriptome assembly from RNA-Seq data without a reference genome

Nature Biotechnology(2011)10.1038/nbt.1883

N/A

1.5DataRank · unranked

22458 citations

Brian J. Haas, Moran Yassour, Joshua Z. Levin, Ido Amit, Xian Adiconis +19 more

Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells

Nature(2013)10.1038/nature12172

N/A

1.1DataRank · unranked

1301 citations

Rahul Satija, Xian Adiconis, Rona S. Gertner, Jellert T. Gaublomme, Raktima Raychowdhury +14 more

Ab initio reconstruction of cell type–specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

Nature Biotechnology(2010)10.1038/nbt.1633

N/A

1.1DataRank · unranked

1265 citations

Manuel Garber, Joshua Z. Levin, Julie Donaghey, James Robinson, Xian Adiconis +9 more

Individual brain organoids reproducibly form cell diversity of the human cerebral cortex

Nature(2019)10.1038/s41586-019-1289-x

N/A

1.1DataRank · unranked

1105 citations

Amanda J. Kedaigle, Sean K. Simmons, Allison Nash, Marina Rocha, Giorgia Quadrato +8 more

Single-cell multiomics atlas of organoid development uncovers longitudinal molecular programs of cellular diversification of the human cerebral cortex

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.17.484798

Top 20%

1.0DataRank

Top 20%22 citations

Amanda J. Kedaigle, Martina Pigoni, Bruna Paulsen, Xian Adiconis, Kwanho Kim +14 more

Comprehensive comparative analysis of strand-specific RNA sequencing methods

Nature Methods(2010)10.1038/nmeth.1491

N/A

0.996DataRank · unranked

765 citations

Moran Yassour, Xian Adiconis, Irene Newsham, Nir Friedman, Andreas Gnirke +3 more

Comparative analysis of RNA sequencing methods for degraded or low-input samples

Nature Methods(2013)10.1038/nmeth.2483

N/A

0.946DataRank · unranked

549 citations

Diego Borges-Rivera, Rahul Satija, David S. DeLuca, Michele A. Busby, Aaron M. Berlin +11 more

Benchmarking single-cell RNA-sequencing protocols for cell atlas projects

Nature Biotechnology(2020)10.1038/s41587-020-0469-4

N/A

0.940DataRank · unranked

526 citations

Atefeh Lafzi, Catia Moutinho, Christoph Ziegenhain, Davis J. McCarthy, Adrián Álvarez-Varela +40 more

Autism genes converge on asynchronous development of shared neuron classes

Nature(2022)10.1038/s41586-021-04358-6

N/A

0.918DataRank · unranked

454 citations

Silvia Velasco, Amanda J. Kedaigle, Martina Pigoni, Giorgia Quadrato, Anthony J. Deo +23 more

Author Correction: Systematic comparison of single-cell and single-nucleus RNA-sequencing methods

Nature Biotechnology(2020)10.1038/s41587-020-0534-z

N/A

0.875DataRank · unranked

16 citations

Xian Adiconis, Sean K. Simmons, Monika S. Kowalczyk, Cynthia C. Hession, Nemanja Despot Marjanovic +17 more

The evolution, evolvability and engineering of gene regulatory DNA

Nature(2022)10.1038/s41586-022-04506-6

N/A

0.854DataRank · unranked

295 citations

Carl G. de Boer, Jennifer Molinet, Moran Yassour, Lin Fan, Xian Adiconis +6 more

Human brain organoids reveal accelerated development of cortical neuron classes as a shared feature of autism risk genes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.10.376509

N/A

0.840DataRank · unranked

20 citations

Silvia Velasco, Amanda J. Kedaigle, Martina Pigoni, Giorgia Quadrato, Xian Adiconis +16 more

Development and evaluation of RNA-seq methods

Genome Biology(2010)10.1186/gb-2010-11-s1-p26

N/A

0.833DataRank · unranked

9 citations

Xian Adiconis, Moran Yassour, Dawn Thompson, Mitchell Guttman, Lin Fan +7 more

Cell-type specific defects inPTEN-mutant cortical organoids converge on abnormal circuit activity

Human Molecular Genetics(2023)10.1093/hmg/ddad107

N/A

0.709DataRank · unranked

24 citations

Ana Uzquiano, Bruna Paulsen, Amanda J. Kedaigle, Sung Min Yang, Panagiotis Symvoulidis +15 more

Single cell RNA-seq by mostly-natural sequencing by synthesis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.29.493705

N/A

0.399DataRank · unranked

1 citations

Gila Lithwick-Yanai, Xian Adiconis, Florian Oberstrass, Nika Iremadze, Kathryn Geiger-Schuller +11 more

Heterochronic parabiosis reprograms the mouse brain transcriptome by shifting aging signatures in multiple cell types

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.27.477911

N/A

0.381DataRank · unranked

6 citations

Kristina M. Holton, Richard M. Giadone, Ceren Ozek, Monika Saxena, Samara Santiago +14 more

Author Correction: Comprehensive comparative analysis of 5′-end RNA-sequencing methods

Nature Methods(2018)10.1038/s41592-018-0237-2

N/A

0.352DataRank · unranked

5 citations

Adam L. Haber, Sean K. Simmons, Pradeep Natarajan, Zhe Ji, Michele A. Busby +8 more

A comprehensive fitness landscape model reveals the evolutionary history and future evolvability of eukaryotic cis -regulatory DNA sequences

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.17.430503

N/A

0.307DataRank · unranked

4 citations

Carl G. de Boer, Moran Yassour, Jennifer Molinet, Lin Fan, Xian Adiconis +6 more

Multi-donor human cortical Chimeroids reveal individual susceptibility to neurotoxic triggers

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.05.558331

N/A

0.302DataRank · unranked

5 citations

Irene Faravelli, Tyler Faits, Sophia Andreadis, Sebastiano Trattaro, Rahel Kästli +8 more

Erratum: Corrigendum: Comparative analysis of RNA sequencing methods for degraded or low-input samples

Nature Methods(2014)10.1038/nmeth0214-210e

N/A

0.212DataRank · unranked

2 citations

Diego Borges-Rivera, Rahul Satija, David S. DeLuca, Michele A. Busby, Aaron M. Berlin +11 more

Cell-type specific developmental defects in PTEN -mutant cortical organoids converge on abnormal circuit activity

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.15.516664

N/A

0.115DataRank · unranked

1 citations

Ana Uzquiano, Bruna Paulsen, Amanda J. Kedaigle, Sung Min Yang, Panagiotis Symvoulidis +14 more

Pluripotent stem cell-derived models of neurological diseases reveal early transcriptional heterogeneity

Genome biology(2021)10.1186/s13059-021-02301-6

N/A

0DataRank · unranked

17 citations

Walaa Oweis, Malka Nissim‐Rafinia, Moria Maman, Shahar Simon, Cynthia C. Hession +13 more

Mostly natural sequencing-by-synthesis for scRNA-seq using Ultima sequencing

Nature Biotechnology(2022)10.1038/s41587-022-01452-6

N/A

0DataRank · unranked

53 citations

Gila Lithwick‐Yanai, Xian Adiconis, Florian C. Oberstrass, Nika Iremadze, Kathryn Geiger-Schuller +9 more

Heterochronic parabiosis reprograms the mouse brain transcriptome by shifting aging signatures in multiple cell types

Nature Aging(2023)10.1038/s43587-023-00373-6

N/A

0DataRank · unranked

71 citations

Kristina M. Holton, Richard M. Giadone, Ceren Ozek, Monika Saxena, Samara Santiago +15 more

Methods to generate single-nucleus RNA-seq libraries from lung cancer samples v1

(2025)10.17504/protocols.io.36wgqpk9yvk5/v1

N/A

0DataRank · unranked

0 citations

Sean K. Simmons, Nathan Haywood, Xian Adiconis, Joshua Z. Levin, Jixiang Zhang

Xian Adiconis

Indexed papers

Top data-sharing exemplar

Papers