Ernesto Nakayasu

Computer ScienceDecision SciencesBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile

0.104Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Data from a multi-year targeted proteomics study of a longitudinal birth cohort of type 1 diabetes

Scientific Data(2025)10.1038/s41597-024-04249-1

Top 78%

0.104DataRank

Top 78%1 citations

Ernesto Nakayasu, Javier E. Flores, Jennifer E. Van Eyk, Michael J. MacCoss, Hemang Parikh +3 more

Papers

Driven by 59 papers — median percentile 22. Top paper: “Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)”.

Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)

Nature Cell Biology(2023)10.1038/s41556-023-01194-w

N/A

2.3DataRank · unranked

175 citations

Liming Pei, Jeffrey M. Spraggins, Michael Angelo, James P. Carson, Nils Gehlenborg +95 more

Inhibition of polyamine biosynthesis preserves β cell function in type 1 diabetes

Cell Reports Medicine(2023)10.1016/j.xcrm.2023.101261

N/A

0.844DataRank · unranked

26 citations

Abhishek Kulkarni, Audrey Hull, Stéphanie Woerner, Susanne M. Cabrera, Lucy D. Mastrandrea +16 more

Systematic review of type 1 diabetes biomarkers reveals regulation in circulating proteins related to complement, lipid metabolism, and immune response

Clinical Proteomics(2023)10.1186/s12014-023-09429-6

N/A

0.638DataRank · unranked

23 citations

Emily C. Elliott, Hayden R. Henry, Ivo Díaz Ludovico, John Melchior, Ashley Frazer‐Abel +7 more

Inhibition of the eukaryotic initiation factor-2α kinase PERK decreases risk of autoimmune diabetes in mice

Journal of Clinical Investigation(2024)10.1172/jci176136

N/A

0.457DataRank · unranked

20 citations

Fei Huang, Jacob R. Enriquez, Jiayi E. Wang, Jennifer B. Nelson, Titli Nargis +20 more

Proteome-Scale Tissue Mapping Using Mass Spectrometry Based on Label-Free and Multiplexed Workflows

Molecular & Cellular Proteomics(2024)10.1016/j.mcpro.2024.100841

N/A

0.425DataRank · unranked

16 citations

Jongmin Jacob Woo, Fengchao Yu, Sarah Williams, Lye Meng Markillie, Ronald Moore +8 more

Plasma protein biomarkers predict both the development of persistent autoantibodies and type 1 diabetes 6 months prior to the onset of autoimmunity: the TEDDY Study

medRxiv(2022)10.1101/2022.12.07.22283187

N/A

0.269DataRank · unranked

5 citations

Lisa Bramer, Charles Ansong, Athena Schepmoes, Thomas Fillmore, Marina Gritsenko +20 more

Proteogenomic Discovery of Novel Open Reading Frames With HLA Immune Presentation on Human β-Cells

Diabetes(2025)10.2337/db24-0527

N/A

0.241DataRank · unranked

4 citations

Roberto Castro-Gutiérrez, Soumyadeep Sarkar, Amber Baldwin, Alexandra S. Baker, Ali H. Shilleh +7 more

Associations between SARS-CoV-2 Infection or COVID-19 Vaccination and Human Milk Composition: A Multi-Omics Approach

Journal of Nutrition(2024)10.1016/j.tjnut.2024.09.032

N/A

0.165DataRank · unranked

2 citations

Ernesto Nakayasu, Bobbie‐Jo Webb‐Robertson, Isabella H. Yang, Josie Eder, Carrie Nicora +13 more

Identification of Exported Plasmodium falciparum Proteins That Bind to the Erythrocyte Cytoskeleton

Microorganisms(2022)10.3390/microorganisms10071438

N/A

0.165DataRank · unranked

2 citations

Geoffrey K. Kilili, Ling Wang, Ernesto Nakayasu, Douglas LaCount, Bikash Shakya

A functional screen for ubiquitin regulation identifies an E3 ligase secreted by Pseudomonas aeruginosa

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.18.613774

N/A

0.165DataRank · unranked

2 citations

Supender Kaur, Aaron J. Ogden, Michael E. Divine, Gus D. Warren, Donghoon Kang +9 more

Proinflammatory Stress Activates Neutral Sphingomyelinase 2–Based Generation of a Ceramide-Enriched β-Cell EV Subpopulation

Diabetes(2025)10.2337/db24-0341

N/A

0.165DataRank · unranked

2 citations

Irene Amalaraj, Andre De Oliveira, Arianna Harris-Kawano, Jacob R. Enriquez, Raghavendra G. Mirmira +7 more

Data from a multi-year targeted proteomics study of a longitudinal birth cohort of type 1 diabetes

Scientific Data(2025)10.1038/s41597-024-04249-1

Top 78%

0.104DataRank

Top 78%1 citations

Ernesto Nakayasu, Javier E. Flores, Jennifer E. Van Eyk, Michael J. MacCoss, Hemang Parikh +3 more

Deoxyhypusine synthase promotes a pro-inflammatory macrophage phenotype

Cell Metabolism(2021)10.1016/j.cmet.2021.08.003

N/A

0DataRank · unranked

63 citations

Annie R. Piñeros, Abhishek Kulkarni, Bobbie‐Jo Webb‐Robertson, Bernhard Maier, Ryan M. Anderson +10 more

Cryptococcus neoformans-Infected Macrophages Release Proinflammatory Extracellular Vesicles: Insight into Their Components by Multi-omics

mBio(2021)10.1128/mbio.00279-21

N/A

0DataRank · unranked

36 citations

Keming Zhang, Hang Li, Carolina Coelho, Diego de Souza Gonçalves, Man Shun Fu +7 more

The Legionella Effector SdjA Is a Bifunctional Enzyme That Distinctly Regulates Phosphoribosyl Ubiquitination

mBio(2021)10.1128/mbio.02316-21

N/A

0DataRank · unranked

49 citations

Yongchao Xie, Chuang Li, Lidong Wang, Chunlin He, Yong Zhang +10 more

Parallel Multi-Omics in High-Risk Subjects for the Identification of Integrated Biomarker Signatures of Type 1 Diabetes

Biomolecules(2021)10.3390/biom11030383

N/A

0DataRank · unranked

31 citations

Luis Felipe Álvarez-Hernández, Ernesto Nakayasu, Carrie Nicora, Charles Ansong, Michael J. Muehlbauer +6 more

Omics Approaches for Understanding Biogenesis, Composition and Functions of Fungal Extracellular Vesicles

Frontiers in Genetics(2021)10.3389/fgene.2021.648524

N/A

0DataRank · unranked

29 citations

Roberta Peres da Silva, Sneha Couvillion, Erin Bredeweg, Meagan Burnet, Carolina Coelho +10 more

Transcriptional and translational landscape of Candida auris in response to caspofungin

Computational and Structural Biotechnology Journal(2021)10.1016/j.csbj.2021.09.007

N/A

0DataRank · unranked

28 citations

Rafaela F. Amatuzzi, Isadora Filipaki Munhoz da Rocha, Sharon T. Martins, Aline Castro Rodrigues Lucena, Alexandre Zanatta Vieira +7 more

Legionella pneumophila modulates host energy metabolism by ADP-ribosylation of ADP/ATP translocases

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.17.460778

N/A

0DataRank · unranked

0 citations

Mowei Zhou, Marina A. Gritsenko, Ernesto Nakayasu, Lei Song, Zhao‐Qing Luo +1 more

Extracellular vesicles in β cell biology: Role of lipids in vesicle biogenesis, cargo, and intercellular signaling

Molecular Metabolism(2022)10.1016/j.molmet.2022.101545

N/A

0DataRank · unranked

27 citations

Abhishek Kulkarni, Matthew W. Becker, Xiaoyong Lei, Soumyadeep Sarkar, Sasanka Ramanadham +5 more

Integration of Infant Metabolite, Genetic, and Islet Autoimmunity Signatures to Predict Type 1 Diabetes by Age 6 Years

The Journal of Clinical Endocrinology & Metabolism(2022)10.1210/clinem/dgac225

N/A

0DataRank · unranked

23 citations

Ernesto Nakayasu, Brigitte I. Frohnert, Lisa Bramer, Sarah Akers, Jill M. Norris +6 more

EMC3 regulates mesenchymal cell survival via control of the mitotic spindle assembly

iScience(2022)10.1016/j.isci.2022.105667

N/A

0DataRank · unranked

7 citations

Wei Wei, John Snowball, Ernesto Nakayasu, Sheila M. Bell, Charles Ansong +3 more

Insulin post-transcriptional regulation via PARP12-mediated ADP- ribosylation

Research Square(2025)10.21203/rs.3.rs-6473437/v1

N/A

0DataRank · unranked

0 citations

Fangjia Li, Youngki You, Emily C. Elliott, Kevin Zemaitis, Hyeyoon Kim +16 more

Probing islet stress in type 1 diabetes

Aging(2020)10.18632/aging.104157

N/A

0DataRank · unranked

0 citations

Thomas Metz, Raghavendra G. Mirmira, Ernesto Nakayasu

Meta-analysis refinement of plasma extracellular vesicle composition identifies proplatelet basic protein as a signaling messenger in type 1 diabetes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.28.509996

N/A

0DataRank · unranked

4 citations

Soumyadeep Sarkar, Emily C. Elliott, Hayden R. Henry, Fei Huang, Samuel H. Payne +6 more

Senescent cell-derived extracellular vesicles inhibit cancer recurrence by coordinating immune surveillance

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.30.498366

N/A

0DataRank · unranked

1 citations

Nicholas L. Calistri, Jennifer M. Finan, Daniel Derrick, Ernesto Nakayasu, Meagan Burnet +5 more

The role of islet lipid composition remodeling in regulation of beta-cell death via ADP-ribosyl-acceptor glycohydrolase ARH3 signaling in insulitis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.23.004481

N/A

0DataRank · unranked

0 citations

Cailin Deiter, Jennifer Kyle, Michelle A. Guney, Dylan Sarbaugh, Ruichuan Yin +15 more

Plasma protein biomarkers predict the development of persistent autoantibodies and type 1 diabetes 6 months prior to the onset of autoimmunity

Cell Reports Medicine(2023)10.1016/j.xcrm.2023.101093

N/A

0DataRank · unranked

48 citations

Lisa Bramer, Charles Ansong, Athena Schepmoes, Thomas Fillmore, Marina A. Gritsenko +20 more

Integrated transcriptional analysis of the cellular and extracellular vesicle RNA content of Candida auris in response to caspofungin

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.04.411843

N/A

0DataRank · unranked

3 citations

Rafaela F. Amatuzzi, Sharon T. Martins, Alexandre Zanatta Vieira, Isadora M. da Rocha, Márcio L. Rodrigues +6 more

Prediction of the development of islet autoantibodies through integration of environmental, genetic, and metabolic markers

Journal of Diabetes(2020)10.1111/1753-0407.13093

N/A

0DataRank · unranked

39 citations

Lisa Bramer, Bryan Stanfill, Sarah Reehl, Ernesto Nakayasu, Thomas Metz +6 more

Interrogating the role of the milk microbiome in mastitis in the multi-omics era

Frontiers in Microbiology(2023)10.3389/fmicb.2023.1105675

N/A

0DataRank · unranked

18 citations

Katie E. Mostoller, Janet E. Williams, Ryan M. Pace, Izabel Stohel, Haley K. Peterson +7 more

Fatty acid-mediated signaling as a target for developing type 1 diabetes therapies

Expert Opinion on Therapeutic Targets(2023)10.1080/14728222.2023.2259099

N/A

0DataRank · unranked

12 citations

Soumyadeep Sarkar, Emily C. Elliott, Suvi Virtanen, Iris Erlund, Sasanka Ramanadham +4 more

Decrease in multiple complement proteins associated with development of islet autoimmunity and type 1 diabetes

iScience(2023)10.1016/j.isci.2023.108769

N/A

0DataRank · unranked

12 citations

Ernesto Nakayasu, Fran Dong, Kathy Waugh, Javier E. Flores, Lisa Bramer +10 more

A proteomic meta-analysis refinement of plasma extracellular vesicles

Scientific Data(2023)10.1038/s41597-023-02748-1

N/A

0DataRank · unranked

39 citations

Soumyadeep Sarkar, Emily C. Elliott, Hayden R. Henry, Samantha Powell, Ivo Díaz Ludovico +9 more

Decrease in multiple complement protein levels is associated with the development of islet autoimmunity and type 1 diabetes

medRxiv(2023)10.1101/2023.07.13.23292628

N/A

0DataRank · unranked

5 citations

Ernesto Nakayasu, Fran Dong, Kathy Waugh, Javier E. Flores, Lisa Bramer +10 more

Regulation of β-cell death by ADP-ribosylhydrolase ARH3 via lipid signaling in insulitis

Research Square(2023)10.21203/rs.3.rs-3249824/v1

N/A

0DataRank · unranked

2 citations

Cailin Deiter, Jennifer Kyle, Michelle A. Guney, Dylan Sarbaugh, Ruichuan Yin +20 more

Inhibition of the Eukaryotic Initiation Factor-2-α Kinase PERK Decreases Risk of Autoimmune Diabetes in Mice

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.06.561126

N/A

0DataRank · unranked

1 citations

Fei Huang, Jacob R. Enriquez, Jiayi E. Wang, Jennifer B. Nelson, Titli Nargis +20 more

Protection of β cells against pro-inflammatory cytokine stress by the GDF15-ERBB2 signaling

medRxiv(2023)10.1101/2023.11.27.23298904

N/A

0DataRank · unranked

1 citations

Farooq Syed, Bobbie‐Jo Webb‐Robertson, John Melchior, Garrick Chang, Marina Gritsenko +12 more

Systematic review of type 1 diabetes biomarkers reveals regulation in circulating proteins related to complement, lipid metabolism, and immune response

medRxiv(2023)10.1101/2023.02.21.23286132

N/A

0DataRank · unranked

0 citations

Emily C. Elliott, Hayden R. Henry, Ivo Díaz Ludovico, John Melchior, Ashley Frazer‐Abel +7 more

Analysis of a macrophage carbamylated proteome reveals a function in post-translational modification crosstalk

Research Square(2023)10.21203/rs.3.rs-3044777/v1

N/A

0DataRank · unranked

0 citations

Chia‐Feng Tsai, Rishi Patel, Soumyadeep Sarkar, Gérémy Clair, Mowei Zhou +5 more

Longitudinal proteomics analysis in the immediate microenvironment of islet allografts during progression of rejection

Journal of Proteomics(2020)10.1016/j.jprot.2020.103826

N/A

0DataRank · unranked

9 citations

Luis Felipe Álvarez-Hernández, Ernesto Nakayasu, Paul Piehowski, Charles Ansong, Midhat H. Abdulreda +2 more

Fic Proteins Inhibit the Activity of Topoisomerase IV by AMPylation in Diverse Bacteria

Frontiers in Microbiology(2020)10.3389/fmicb.2020.02084

N/A

0DataRank · unranked

10 citations

Alix McCloskey, Furong Chen, Ernesto Nakayasu, Liqun Zhang, Zhao‐Qing Luo +1 more

Regulation of β-cell death by ADP-ribosylhydrolase ARH3 via lipid signaling in insulitis

Cell Communication and Signaling(2024)10.1186/s12964-023-01437-1

N/A

0DataRank · unranked

6 citations

Cailin Deiter, Jennifer Kyle, Michelle A. Guney, Dylan Sarbaugh, Ruichuan Yin +20 more

EMC3 regulates trafficking and pulmonary toxicity of the SFTPCI73T mutation associated with interstitial lung disease

Journal of Clinical Investigation(2024)10.1172/jci173861

N/A

0DataRank · unranked

3 citations

Wei Wei, Yuqing Sun, Timothy E. Weaver, Ernesto Nakayasu, Gérémy Clair +12 more

An integrated multi-omics approach identifies the landscape of interferon-α-mediated responses of human pancreatic beta cells

Nature Communications(2020)10.1038/s41467-020-16327-0

N/A

0DataRank · unranked

140 citations

Mireia Ramos-Rodríguez, Ernesto Nakayasu, Maria Inês Alvelos, Miguel Lopes, Jessica L. Hill +17 more

Free fatty acids accelerate β-cell death in type 1 diabetes

medRxiv(2024)10.1101/2024.09.16.24313433

N/A

0DataRank · unranked

3 citations

Soumyadeep Sakar, Lisa Bramer, Meagan Burnet, Young‐Mo Kim, Xiaoyan Yi +11 more

Metabolites, Lipids, Protein extraction protocol (MPLEx) v1

(2025)10.17504/protocols.io.36wgqd15ovk5/v1

N/A

0DataRank · unranked

0 citations

Gérémy Clair, Ernesto Nakayasu, Weijun Qian, Heather E. Olson

Proteome-scale tissue mapping using mass spectrometry based on label-free and multiplexed workflows

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.04.583367

N/A

0DataRank · unranked

1 citations

Jongmin Jacob Woo, Fengchao Yu, Sarah Williams, Lye Meng Markillie, Ronald Moore +8 more

A Composite Biomarker Signature of Type 1 Diabetes Risk Identified via Augmentation of Parallel Multi-Omics Data from a Small Cohort

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.09.579673

N/A

0DataRank · unranked

0 citations

Sung-Ting Chuang, Gang Ren, Mitsunori Ogihara, Bobbie‐Jo Webb‐Robertson, Ernesto Nakayasu +3 more

Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)

UNC Libraries(2024)10.17615/57gg-2n56

N/A

0DataRank · unranked

0 citations

Louise C. Laurent, Neil L. Kelleher, Huiping Liu, Weijun Qian, Mowei Zhou +21 more

Comprehensive Proteomics Analysis of Stressed Human Islets Identifies GDF15 as a Target for Type 1 Diabetes Intervention

Cell Metabolism(2020)10.1016/j.cmet.2019.12.005

N/A

0DataRank · unranked

123 citations

Farooq Syed, Sarah A. Tersey, Marina A. Gritsenko, Hugh Mitchell, Chi Yuet Chan +11 more

Persistent urinary metabolic signatures in children with type 1 diabetes

Next research.(2025)10.1016/j.nexres.2025.100725

N/A

0DataRank · unranked

0 citations

Javier E. Flores, Lisa Bramer, Jiawei Chin, Young‐Mo Kim, Farooq Syed +9 more

Protein carbamylation and proteomics: from artifacts to elucidation of biological functions

Frontiers in Analytical Science(2025)10.3389/frans.2024.1512573

N/A

0DataRank · unranked

1 citations

Gina M. Many, Ernesto Nakayasu, Youngki You

Genetic mapping of complement system proteins for islet autoimmunity in children with high risk of T1D

Communications Biology(2025)10.1038/s42003-025-08739-9

N/A

0DataRank · unranked

1 citations

Bobbie‐Jo Webb‐Robertson, Hemang Parikh, Ernesto Nakayasu, Suna Önengüt-Gümüşcü, Wei‐Min Chen +6 more

Genome-wide mapping of complement system proteins for islet autoimmunity in the DAISY and TEDDY children

Research Square(2025)10.21203/rs.3.rs-5975824/v1

N/A

0DataRank · unranked

0 citations

Bobbie‐Jo Webb‐Robertson, Hemang Parikh, Ernesto Nakayasu, Suna Önengüt-Gümüşcü, Wei‐Min Chen +6 more

MPLEx: a Robust and Universal Protocol for Single-Sample Integrative Proteomic, Metabolomic, and Lipidomic Analyses

UNC Libraries(2020)10.17615/xw6w-ts66

N/A

0DataRank · unranked

0 citations

Richard D. Smith, Ernesto Nakayasu, Athena Schepmoes, Young‐Mo Kim, Thomas Metz +10 more

MPLEx: a method for simultaneous pathogen inactivation and extraction of samples for multi-omics profiling

UNC Libraries(2020)10.17615/5w0e-ms17

N/A

0DataRank · unranked

0 citations

Michael E. Konkel, Richard Smith, Fabien Habyarimana, Peter Halfmann, Vladimir L. Motin +23 more

Comparative Molecular and Immunoregulatory Analysis of Extracellular Vesicles from Candida albicans and Candida auris

mSystems(2021)10.1128/msystems.00822-21

N/A

0DataRank · unranked

80 citations

Heino Heyman, Sneha Couvillion, Radamés J. B. Cordero, Márcio L. Rodrigues, Leonardo Nimrichter +6 more

Tutorial: best practices and considerations for mass-spectrometry-based protein biomarker discovery and validation

Nature Protocols(2021)10.1038/s41596-021-00566-6

N/A

0DataRank · unranked

278 citations

Marina Gritsenko, Paul Piehowski, Yuqian Gao, Daniel J. Orton, Athena Schepmoes +11 more

Ernesto Nakayasu

Indexed papers

Top data-sharing exemplar

Papers