🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Joshua L. Cherry

National Institutes of Health

ORCID: 0000-0002-4076-1862

Also affiliated with United States National Library of Medicine

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

12.0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes

Genome Research(2009)10.1101/gr.080531.108

Top 1%

12.0DataRank

Top 1%592 citations

Jennifer Harrow, Rachel A. Harte, Craig Wallin, Mark Diekhans, Bin Ma +52 more

Papers

Driven by 14 papers — median percentile 99. Top paper: “The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes”.

The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes

Genome Research(2009)10.1101/gr.080531.108

Top 1%

12.0DataRank

Top 1%592 citations

Jennifer Harrow, Rachel A. Harte, Craig Wallin, Mark Diekhans, Bin Ma +52 more

The Jeffreys–Lindley paradox: an exchange

Archive for History of Exact Sciences(2023)10.1007/s00407-023-00310-4

N/A

0.104DataRank · unranked

1 citations

Joshua L. Cherry, Eric‐Jan Wagenmakers, Alexander Ly, Jeremy Gray

Extreme C-to-A Hypermutation at a Site of Cytosine-N4 Methylation

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.19.427316

N/A

0DataRank · unranked

3 citations

Joshua L. Cherry

Restriction Endonuclease-Based Modification-Dependent Enrichment (REMoDE) of DNA for Metagenomic Sequencing

Applied and Environmental Microbiology(2022)10.1128/aem.01670-22

N/A

0DataRank · unranked

6 citations

Joshua L. Cherry, Susan R. Leonard, Ivan N. Zheludev, David J. Lipman, Andrew Fire +1 more

Evolution of influenza A virus hemagglutinin H1 and H3 across host species

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.20.488870

N/A

0DataRank · unranked

5 citations

Sairah Khan, Philippe Lemey, Martha I. Nelson, Joshua L. Cherry, Nídia S. Trovão

Restriction Endonuclease-based Modification-Dependent Enrichment (REMoDE) of DNA for Metagenomic Sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.30.510419

N/A

0DataRank · unranked

1 citations

Joshua L. Cherry, Susan R. Leonard, Ivan N. Zheludev, David J. Lipman, Andrew Fire +1 more

T Residues Preceded by Runs of G are Hotspots of T→G Mutation in Bacteria

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.28.514265

N/A

0DataRank · unranked

0 citations

Joshua L. Cherry

Comparative evolution of influenza A virus H1 and H3 head and stalk domains across host species

mBio(2023)10.1128/mbio.02649-23

N/A

0DataRank · unranked

8 citations

Sairah Khan, Philippe Lemey, Martha I. Nelson, Joshua L. Cherry, Nídia S. Trovão

T Residues Preceded by Runs of G Are Hotspots of T→G Mutation in Bacteria

Genome Biology and Evolution(2023)10.1093/gbe/evad087

N/A

0DataRank · unranked

8 citations

Joshua L. Cherry

Accelerating Bayesian inference of dependency between mixed-type biological traits

PLoS Computational Biology(2023)10.1371/journal.pcbi.1011419

N/A

0DataRank · unranked

6 citations

Akihiko Nishimura, Nídia S. Trovão, Joshua L. Cherry, Andrew J. Holbrook, Xiang Ji +3 more

Genomic perspectives on foodborne illness

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2411894121

N/A

0DataRank · unranked

9 citations

Joshua L. Cherry, Strain Errol, Richa Agarwala, Steven M. Musser, David J. Lipman

Genomic perspectives on foodborne illness

medRxiv(2024)10.1101/2024.05.16.24307425

N/A

0DataRank · unranked

0 citations

Joshua L. Cherry, Errol Strain, Richa Agarwala, Steven M. Musser, David J. Lipman

GnT Motifs Can Increase T:A→G:C Mutation Rates Over 1000-fold in Bacteria

Molecular Biology and Evolution(2025)10.1093/molbev/msaf183

N/A

0DataRank · unranked

1 citations

Joshua L. Cherry, Gretel Waugh, Tiffany Taylor, J. Stephen Horton

Selection-Driven Gene Inactivation in Salmonella

Genome Biology and Evolution(2020)10.1093/gbe/evaa010

N/A

0DataRank · unranked

25 citations

Joshua L. Cherry