Vilas Menon

Columbia University Irving Medical Center

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

7.9Author DataRank

Indexed papers

9in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 9 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A harmonized atlas of mouse spinal cord cell types and their spatial organization

Nature Communications(2021)10.1038/s41467-021-25125-1

Top 6%

3.9DataRank

Top 6%277 citations

Ryan B. Patterson Cross, Li Li, Stephanie C. Koch, Kaya J.E. Matson, Archana Yadav +6 more

Papers

Driven by 104 papers — median percentile 47. Top paper: “CORTECON: A Temporal Transcriptome Analysis of In Vitro Human Cerebral Cortex Development from Human Embryonic Stem Cells”.

CORTECON: A Temporal Transcriptome Analysis of In Vitro Human Cerebral Cortex Development from Human Embryonic Stem Cells

Neuron(2014)10.1016/j.neuron.2014.05.013

N/A

8.4DataRank · unranked

220 citations

Nathan C. Boles, Thomas R. Kiehl, Barbara Corneo, Patty Lederman, Vilas Menon +9 more

SenNet recommendations for detecting senescent cells in different tissues

Nature Reviews Molecular Cell Biology(2024)10.1038/s41580-024-00738-8

N/A

4.6DataRank · unranked

356 citations

Adam D. Hudgins, Adarsh Rajesh, Alberto Pappalardo, Alla Y. Karpova, Amit Dey +74 more

A harmonized atlas of mouse spinal cord cell types and their spatial organization

Nature Communications(2021)10.1038/s41467-021-25125-1

Top 6%

3.9DataRank

Top 6%277 citations

Ryan B. Patterson Cross, Li Li, Stephanie C. Koch, Kaya J.E. Matson, Archana Yadav +6 more

Cell subtype-specific effects of genetic variation in the Alzheimer’s disease brain

Nature Genetics(2024)10.1038/s41588-024-01685-y

Top 9%

2.3DataRank

Top 9%179 citations

Zongmei Gao, Lu Zeng, Cristin McCabe, Charles C. White, Bernard Ng +22 more

Single-cell and single-nucleus RNA-seq uncovers shared and distinct axes of variation in dorsal LGN neurons in mice, non-human primates, and humans

eLife(2021)10.7554/elife.64875

N/A

2.0DataRank · unranked

89 citations

Cindy T. J. van Velthoven, Vilas Menon, Rebecca D. Hodge, Zizhen Yao, Thuc Nghi Nguyen +24 more

Multicellular communities are perturbed in the aging human brain and Alzheimer’s disease

Nature Neuroscience(2023)10.1038/s41593-023-01356-x

N/A

1.7DataRank · unranked

107 citations

Mariko Taga, Cristin McCabe, Gilad S. Green, Idan Hekselman, Charles C. White +12 more

Cell-type-specific Alzheimer’s disease polygenic risk scores are associated with distinct disease processes in Alzheimer’s disease

Nature Communications(2023)10.1038/s41467-023-43132-2

N/A

1.1DataRank · unranked

40 citations

Ling Teng, Daniel W. Kang, Vilas Menon, Tian Ge, Hilary K. Finucane +12 more

Single cell RNA sequencing of human microglia uncovers a subset associated with Alzheimer’s disease

Nature Communications(2020)10.1038/s41467-020-19737-2

N/A

0.992DataRank · unranked

743 citations

Vilas Menon, Naomi Habib, Yiyi Ma, Christina J. Yung, Maria Cimpean +26 more

A framework for sharing of clinical and genetic data for precision medicine applications

Nature Medicine(2024)10.1038/s41591-024-03239-5

N/A

0.857DataRank · unranked

32 citations

Ulugbek K. Baymuradov, Hemali Phatnani, Justin Kwan, Dhruv Sareen, James R. Broach +63 more

Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.07.531493

N/A

0.854DataRank · unranked

44 citations

Wayne N. Frankel, Mariko Taga, Cristin McCabe, Anael Cain, Charles C. White +10 more

Cell-subtype specific effects of genetic variation in the aging and Alzheimer cortex

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.07.515446

N/A

0.808DataRank · unranked

35 citations

Zongmei Gao, Lu Zeng, Cristin McCabe, Charles C. White, Bernard Ng +22 more

Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage

Nature Methods(2025)10.1038/s41592-024-02563-5

Top 25%

0.802DataRank

Top 25%33 citations

Philip D. Blood, Jonathan C. Silverstein, Matthew Ruffalo, Rahul Satija, Sarah A. Teichmann +95 more

Multi-omic analysis of Huntington’s disease reveals a compensatory astrocyte state

Nature Communications(2024)10.1038/s41467-024-50626-0

N/A

0.787DataRank · unranked

39 citations

Ji‐Sun Kwon, Christopher Ng, Kelly Jakubiak, Nacoya Madden, Kenneth Ofori +17 more

Cellular communities reveal trajectories of brain ageing and Alzheimer’s disease

Nature(2024)10.1038/s41586-024-07871-6

N/A

0.776DataRank · unranked

175 citations

Masashi Fujita, Hyun‐Sik Yang, Mariko Taga, Anael Cain, Cristin McCabe +13 more

Applying single-cell and single-nucleus genomics to studies of cellular heterogeneity and cell fate transitions in the nervous system

Nature Neuroscience(2024)10.1038/s41593-024-01827-9

N/A

0.613DataRank · unranked

18 citations

Trygve E. Bakken, Aparna Bhaduri, Chintan Chhatbar, Mariella G. Filbin, David Gate +21 more

TDP-43 loss induces cryptic polyadenylation in ALS/FTD

Nature Neuroscience(2025)10.1038/s41593-025-02050-w

N/A

0.593DataRank · unranked

23 citations

Anna‐Leigh Brown, Max Z. Y. J. Chien, Dario Dattilo, Puja R. Mehta, Francesca Mattedi +94 more

An integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patients

iScience(2021)10.1016/j.isci.2021.103221

N/A

0.593DataRank · unranked

51 citations

Justin Kwan, Dhruv Sareen, James R. Broach, Zachary Simmons, Ximena Arcila-Londono +92 more

Single cell RNA sequencing of human microglia uncovers a subset that is associated with Alzheimer’s disease

Alzheimer's & Dementia(2020)10.1002/alz.038589

N/A

0.505DataRank · unranked

28 citations

Vilas Menon, Naomi Habib, Mariko Taga, Yiyi Ma, Anthony Khairallah +11 more

Cell-type specific cis-eQTLs in eight brain cell-types identifies novel risk genes for human brain disorders

10.1101/2021.10.09.21264604

N/A

0.505DataRank · unranked

12 citations

Daniela Calini, Will Macnair, Lynette Foo, Eduard Urich, Ward Ortmann +11 more

A Single-Nucleus Transcriptome-Wide Association Study Implicates Novel Genes in Depression Pathogenesis

Biological Psychiatry(2023)10.1016/j.biopsych.2023.12.012

N/A

0.494DataRank · unranked

26 citations

Masashi Fujita, Zongmei Gao, Charles C. White, Gilad S. Green, Naomi Habib +6 more

A cross-disease human microglial framework identifies disease-enriched subsets and tool compounds for microglial polarization

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.04.494709

N/A

0.464DataRank · unranked

21 citations

Mariko Taga, Verena Haage, Tina Roostaei, Charles C. White, Annie Lee +22 more

A Human Brain Map of Mitochondrial Respiratory Capacity and Diversity

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.05.583623

Top 42%

0.453DataRank

Top 42%10 citations

Ayelet M Rosenberg, Anna S. Monzel, Corey Osto, Linsey Stiles, Gorazd Rosoklija +16 more

A Cellular Taxonomy of the Adult Human Spinal Cord

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.25.485808

N/A

0.385DataRank · unranked

12 citations

Kaya J.E. Matson, Li Li, Isabelle Hua, Joana Petrescu, Kristy Kang +28 more

The role of alpha-synuclein in synucleinopathy: Impact on lipid regulation at mitochondria–ER membranes

npj Parkinson s Disease(2025)10.1038/s41531-025-00960-x

N/A

0.385DataRank · unranked

12 citations

Cristina Guardia‐Laguarta, Taekyung yun, Zena K. Chatila, Xena Flowers, Chantel Wong +14 more

Single-nucleus and spatial transcriptomic profiling of human temporal cortex and white matter reveals key associations with AD pathology

Nature Communications(2025)10.1038/s41467-025-65350-6

N/A

0.345DataRank · unranked

9 citations

Julien Bryois, Daniela Calini, Lynette C. Foo, Jeroen J.M. Hoozemans, Archana Yadav +3 more

Single-cell transcriptomic landscape of the neuroimmune compartment in amyotrophic lateral sclerosis brain and spinal cord

Acta Neuropathologica(2025)10.1007/s00401-025-02913-3

N/A

0.338DataRank · unranked

8 citations

Masashi Fujita, Emily Lee, Nivedita Nimmagadda, Anthony Khairallah, Claire Harbison +19 more

Genotype–phenotype correlation of T-cell subtypes reveals senescent and cytotoxic genes in Alzheimer’s disease

Human Molecular Genetics(2022)10.1093/hmg/ddac126

N/A

0.330DataRank · unranked

8 citations

Thomas Buttrick, Maria Cimpean, David A. Bennett, Vilas Menon, Elizabeth M. Bradshaw +3 more

Mitotyping – An integrative framework to quantify mitochondrial specialization and plasticity

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.03.635951

N/A

0.292DataRank · unranked

6 citations

Jack Devine, Darshana Kapri, Gabriel Sturm, Caroline Trumpff, Vilas Menon +4 more

Cell-type-specific Alzheimer’s disease polygenic risk scores are associated with distinct disease processes in Alzheimer’s disease

medRxiv(2023)10.1101/2023.06.01.23290850

N/A

0.241DataRank · unranked

4 citations

Ling Teng, Daniel W. Kang, Vilas Menon, Tian Ge, Hilary K. Finucane +12 more

Cell-type-specific regulation of APOE levels in human neurons by the Alzheimer’s disease risk gene SORL1

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.25.530017

N/A

0.220DataRank · unranked

3 citations

Aimee J. Aylward, Richard V. Pearse, Yi‐Chen Hsieh, Zachary M. Augur, Courtney R. Benoit +13 more

Single‐cell landscape of sex‐specific drivers of Alzheimer's disease

Alzheimer s & Dementia(2025)10.1002/alz.71041

Top 65%

0.208DataRank

Top 65%3 citations

Kyle J. Travaglini, Mariano I. Gabitto, C. Dirk Keene, AR Dunn, Catherine C. Kaczorowski +7 more

P4‐256: A SINGLE‐CELL‐BASED ATLAS OF HUMAN MICROGLIAL STATES SHOWS DIVERGENT ASSOCIATIONS WITH AGING‐RELATED NEUROPATHOLOGIES AND DEMENTIA

Alzheimer's & Dementia(2018)10.1016/j.jalz.2018.07.078

N/A

0.207DataRank · unranked

2 citations

Vilas Menon, Naomi Habib, Mariko Taga, Christina J. Yung, Rani A. Sarkis +8 more

Annotation Comparison Explorer (ACE): connecting brain cell types across studies of health and Alzheimer’s Disease

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.11.637559

Top 66%

0.177DataRank

Top 66%2 citations

Kyle J. Travaglini, Tain Luquez, Rachel E. Hostetler, Aaron Oster, Scott Daniel +3 more

FMNL2 interacts with cerebrovascular risk factors to alter Alzheimer’s disease risk

medRxiv(2020)10.1101/2020.08.30.20184879

N/A

0.165DataRank · unranked

2 citations

Sanjeev Sariya, Annie Lee, Yizhe Gao, Dolly Reyes‐Dumeyer, Philip L. De Jager +11 more

A Human Brain Map of Mitochondrial Respiratory Capacity and Diversity

Research Square(2024)10.21203/rs.3.rs-4047706/v1

Top 71%

0.120DataRank

Top 71%1 citations

Eugene V. Mosharov, Ayelet M Rosenberg, Anna S. Monzel, Corey Osto, Linsey Stiles +16 more

Early neuronal reprogramming and cell cycle reentry shape Alzheimer’s disease progression

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.04.653670

N/A

0.104DataRank · unranked

1 citations

Gary E. Schwartz, Miriam Adam, Adi Avni Lapidot, Anael Cain, Gilad Sahar Green +5 more

INPP5D/SHIP1 regulates inflammasome activation in human microglia

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.25.530025

N/A

0DataRank · unranked

10 citations

Seeley B. Fancher, Richard V. Pearse, Hyo Lee, Matti Lam, Nicholas T. Seyfried +5 more

RNA- and ATAC-sequencing Reveals a Unique CD83+ Microglial Population Focally Depleted in Parkinson’s Disease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.17.540842

N/A

0DataRank · unranked

10 citations

Adhikrao Yadav, Jan Mareš, Xena Flowers, Taekyung yun, Md. Mamunur Rashid +14 more

Psychosocial experiences are associated with human brain mitochondrial biology

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.06.559575

N/A

0DataRank · unranked

5 citations

Anna S. Monzel, Carmen Sandi, Vilas Menon, Hans‐Ulrich Klein, Masashi Fujita +14 more

A cross-disease resource of living human microglia identifies disease-enriched subsets and tool compounds recapitulating microglial states

Nature Neuroscience(2024)10.1038/s41593-024-01764-7

N/A

0DataRank · unranked

51 citations

Mariko Taga, Verena Haage, Victoria Marshe, Tina Roostaei, Charles C. White +25 more

Genome sequence analyses identify novel risk loci for multiple system atrophy

Neuron(2024)10.1016/j.neuron.2024.04.002

N/A

0DataRank · unranked

44 citations

Anindita Ray, Zalak Shah, Jinhui Ding, Paola Ruffo, Masashi Fujita +95 more

Psychosocial experiences are associated with human brain mitochondrial biology

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2317673121

N/A

0DataRank · unranked

42 citations

Anna S. Monzel, Carmen Sandi, Vilas Menon, Hans‐Ulrich Klein, Masashi Fujita +14 more

Immune Response following FLASH and Conventional Radiation in Diffuse Midline Glioma

International Journal of Radiation Oncology*Biology*Physics(2024)10.1016/j.ijrobp.2024.01.219

N/A

0DataRank · unranked

32 citations

Hanna E. Minns, Hong-Jian Wei, Weijia Fan, Andrea Webster-Carrion, Masih Tazhibi +20 more

APOE ε4–associated heterogeneity of neuroimaging biomarkers across the Alzheimer's disease continuum

Alzheimer s & Dementia(2024)10.1002/alz.14392

N/A

0DataRank · unranked

10 citations

Gautam Kumar, Anurag Sharma, Sheina Emrani, Laura Beth McIntire, Jia Guo +4 more

An analysis of RNA quality metrics in human brain tissue

Journal of Neuropathology & Experimental Neurology(2024)10.1093/jnen/nlae132

N/A

0DataRank · unranked

11 citations

Tiffany G. Lam, Sophie K. Ross, Benjamin Ciener, Sandra Leskinen, Sharanya Sivakumar +6 more

Xenografted human iPSC-derived neurons with the familial Alzheimer’s disease APPV717I mutation reveal dysregulated transcriptome signatures linked to synaptic function and implicate LINGO2 as a disease signaling mediator

Acta Neuropathologica(2024)10.1007/s00401-024-02755-5

N/A

0DataRank · unranked

10 citations

Matti Lam, Julie J. McInvale, Jason Mares, Sam Hyun Kwon, Nelson Humala +14 more

Distinct microglial transcriptomic signatures within the hippocampus

PLoS ONE(2024)10.1371/journal.pone.0296280

N/A

0DataRank · unranked

9 citations

Pallavi Gaur, Nicole Vo, Elizabeth M. Bradshaw, Vilas Menon, Steven G. Kernie +1 more

An integrated toolkit for human microglia functional genomics

Stem Cell Research & Therapy(2024)10.1186/s13287-024-03700-9

N/A

0DataRank · unranked

8 citations

Jason C. Ngo, Nainika Roy, Renshun Pan, Nadiya Nawsheen, Rebecca Chiu +8 more

New directions for Alzheimer's disease research from the Jackson Laboratory Center for Alzheimer's and Dementia Research 2022 workshop

Alzheimer s & Dementia Translational Research & Clinical Interventions(2024)10.1002/trc2.12458

N/A

0DataRank · unranked

3 citations

Thomas J. Murdy, Olivia J. Marola, Kevin Charland, Michael MacLean, Tain Luquez +18 more

A pharmacological toolkit for human microglia identifies Topoisomerase I inhibitors as immunomodulators for Alzheimer’s disease

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.06.579103

N/A

0DataRank · unranked

16 citations

John F. Tuddenham, Natacha Comandante-Lou, Alex R. Bautista, Anna S. Monzel, Rebecca Chiu +26 more

A Vulnerable Subtype of Dopaminergic Neurons Drives Early Motor Deficits in Parkinson’s Disease

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.20.629776

N/A

0DataRank · unranked

12 citations

David Ng, Zachary Lewis, Archana Yadav, Tatiana Saraiva, Luke A. Hammond +6 more

HDAC Inhibitors recapitulate Human Disease-Associated Microglia Signatures in vitro

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.11.617544

N/A

0DataRank · unranked

9 citations

John F. Tuddenham, Alex R. Bautista, Charles C. White, Frankie G. Garcia, Ronak Patel +8 more

A conserved cell-type gradient across the human mediodorsal and paraventricular thalamus

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.03.611112

N/A

0DataRank · unranked

8 citations

Ningping Feng, Pavan Auluck, Arghya Mukherjee, Ruchi Komal, Yan Leng +21 more

Hippocampus Glutathione S Reductase Potentially Confers Genetic Resilience to Cognitive Decline in the AD-BXD Mouse Population

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.09.574219

N/A

0DataRank · unranked

3 citations

Elizabeth Litkowski, Niran Hadad, Amy R. Dunn, Stephanie M. Boas, Jon A. L. Willcox +13 more

Mapping and characterization of structural variation in 17,795 human genomes

UNC Libraries(2024)10.17615/bjv3-ys88

Top 100%

0DataRank

Top 100%0 citations

S.S. Rich, Elizabeth L. Appelbaum, Ryan M. Layer, Subra Kugathasan, Scott M. Damrauer +95 more

An analysis of RNA quality metrics in human brain tissue

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.14.618253

N/A

0DataRank · unranked

0 citations

Tiffany G. Lam, Sophie K. Ross, Benjamin Ciener, Sandra Leskinen, Sharanya Sivakumar +6 more

CLU alleviates Alzheimer’s disease-relevant processes by modulating astrocyte reactivity and microglia-dependent synaptic density

Neuron(2025)10.1016/j.neuron.2025.03.034

N/A

0DataRank · unranked

41 citations

Elyssa F L Grogan, Courtney R. Benoit, Richard V. Pearse, Sarah E. Heuer, Tain Luquez +14 more

Astrocyte induction of disease-associated microglia is suppressed by acute exposure to fAD neurons in human iPSC triple cultures

Cell Reports(2025)10.1016/j.celrep.2025.115777

N/A

0DataRank · unranked

22 citations

Nancy Ashour, Richard V. Pearse, Paige C. Galle, Gwendolyn A Orme, Sarah E. Heuer +10 more

Contributions of Genetic Variation in Astrocytes to Cell and Molecular Mechanisms of Risk and Resilience to Late‐Onset Alzheimer's Disease

Glia(2025)10.1002/glia.24677

N/A

0DataRank · unranked

19 citations

Richard V. Pearse, Alexandra M Lish, Cheryl Pan, Zachary M. Augur, Gizem Terzioğlu +12 more

Reconstructed cell-type-specific rhythms in human brain link Alzheimer’s pathology, circadian stress, and ribosomal disruption

Neuron(2025)10.1016/j.neuron.2025.07.010

N/A

0DataRank · unranked

11 citations

Ashish Sharma, Patrick W. Sheehan, Leonard B. Maggi, Jason D. Weber, Jan A. Hammarlund +5 more

HDAC inhibitors engage MITF and the disease-associated microglia signature to enhance amyloid β uptake

Brain Behavior and Immunity(2025)10.1016/j.bbi.2025.05.027

N/A

0DataRank · unranked

6 citations

John F. Tuddenham, Alex R. Bautista, Frankie G. Garcia, Charles C. White, Ronak Patel +14 more

Corticothalamic neurons in motor cortex have a permissive role in motor execution

Nature Communications(2025)10.1038/s41467-025-59954-1

N/A

0DataRank · unranked

3 citations

Anders Nelson, Lin T. Tun, Kim An, Rani Shiao, Michael Kissner +3 more

Uncovering the Signatures of Cellular Senescence in the Human Dorsolateral Prefrontal Cortex

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.19.639091

N/A

0DataRank · unranked

1 citations

Jason Mares, Aidan C. Daly, Lilian A. Coie, Shaunice Grier, Natalie Barretto +13 more

Brain Multi-Omic Subtypes of Neuroticism reveal molecular signatures linked to Alzheimer’s Disease

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.19.654904

N/A

0DataRank · unranked

0 citations

Ketila Kaliane Bacelar Brito Lopes, Caio M.P.F. Batalha, Lei Yu, Victoria N. Poole, Shinya Tasaki +9 more

Cell-type-specific Transcriptomic-wide Association Studies Detected 91 Independent Risk Genes for Alzheimer’s Disease Dementia

medRxiv(2025)10.1101/2025.05.27.25328452

N/A

0DataRank · unranked

0 citations

Randy L. Parrish, Shizhen Tang, Shinya Tasaki, David A. Bennett, Nicholas T. Seyfried +5 more

Modulation of miR-23b Wnt/β-catenin Axis Strengthens Endothelial Barrier Properties

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.20.671398

N/A

0DataRank · unranked

0 citations

Rose Presby, Sara Nakanishi, Iben Daugaard Krog, Douglas Jury, Brian R. Lawson +7 more

Uncovering hidden factors of cognitive resilience in Alzheimer’s disease using a conditional-Gaussian mixture variational autoencoder

npj Dementia(2025)10.1038/s44400-025-00042-y

N/A

0DataRank · unranked

0 citations

Yogya Chukkapalli, Saranya Canchi, Varnika Umashankar, Tain Luquez, Vaibhav Janve +5 more

APOE, ABCA7 , and RASGEF1C are associated with earlier onset of amyloid deposition from more than 4000 harmonized positron emission tomography images

Alzheimer s & Dementia(2025)10.1002/alz.71006

N/A

0DataRank · unranked

0 citations

Ting Chen Wang, Emma Nolan, Yiyang Wu, Mengna Zhang, Michelle Clifton +28 more

A reproducible signature of cytoskeletal and ALS-related genes in human motoneurons

Neuron(2023)10.1016/j.neuron.2023.10.034

N/A

0DataRank · unranked

6 citations

Kaya J.E. Matson, Dylan I. Lee, Mor R. Alkaslasi, R. Brian Roome, Michael E. Ward +5 more

Assessment of Spontaneous Neuronal ActivityIn VitroUsing Multi-Well Multi-Electrode Arrays: Implications for Assay Development

eNeuro(2020)10.1523/eneuro.0080-19.2019

N/A

0DataRank · unranked

59 citations

Vilas Menon, Tracy L. Young‐Pearse, Joseph Negri

Molecular development of muscle spindle and Golgi tendon organ sensory afferents revealed by single proprioceptor transcriptome analysis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.03.023986

N/A

0DataRank · unranked

10 citations

Danny Florez-Paz, Tudor C. Badea, George Z. Mentis, Vilas Menon, Joriene C. de Nooij +1 more

Neuroinflammation characterizes the earliest changes in Alzheimer’s disease pathology and associated subjective cognitive impairment in adult hydrocephalus biopsies

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.01.322511

N/A

0DataRank · unranked

0 citations

Anne Marie W. Bartosch, Harrison Xiao, Xena Flowers, Sandra Leskinen, Zeljko Tomljanovic +8 more

Aging disrupts circadian gene regulation and function in macrophages

Nature Immunology(2021)10.1038/s41590-021-01083-0

N/A

0DataRank · unranked

164 citations

Connie Tsai, Lev Litichevskiy, Zohar Shipony, Chinyere Agbaegbu Iweka, Kai Markus Schneider +6 more

Selecting single cell clustering parameter values using subsampling-based robustness metrics

BMC Bioinformatics(2021)10.1186/s12859-021-03957-4

N/A

0DataRank · unranked

100 citations

Ariel J. Levine, Vilas Menon, Ryan B. Patterson Cross

Molecular correlates of muscle spindle and Golgi tendon organ afferents

Nature Communications(2021)10.1038/s41467-021-21880-3

N/A

0DataRank · unranked

79 citations

Danny Florez-Paz, Tudor C. Badea, George Z. Mentis, Vilas Menon, Joriene C. de Nooij +1 more

Complexity and graded regulation of neuronal cell-type–specific alternative splicing revealed by single-cell RNA sequencing

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2013056118

N/A

0DataRank · unranked

76 citations

Daniel F. Moakley, Shuonan Chen, Melissa G. McKenzie, Vilas Menon, Chaolin Zhang +1 more

An immune response characterizes early Alzheimer’s disease pathology and subjective cognitive impairment in hydrocephalus biopsies

Nature Communications(2021)10.1038/s41467-021-25902-y

N/A

0DataRank · unranked

20 citations

Anne Marie W. Bartosch, Harrison Xiao, Suvrajit Maji, Elliot H. H. Youth, Xena Flowers +10 more

Epigenomic features related to microglia are associated with attenuated effect of APOE ε4 on Alzheimer's disease risk in humans

Alzheimer s & Dementia(2021)10.1002/alz.12425

N/A

0DataRank · unranked

16 citations

Lei Yu, Marta Olah, Rebecca G. Smith, Stephanie R. Oatman, Mariet Allen +9 more

Re-convolving the compositional landscape of primary and recurrent glioblastoma reveals prognostic and targetable tissue states

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.06.451295

N/A

0DataRank · unranked

8 citations

Michael Argenziano, Adithya Kannan, Aayushi Mahajan, Julia Furnari, Fahad Paryani +23 more

Unique Microglial Transcriptomic Signature within the Hippocampal Neurogenic Niche

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.29.457876

N/A

0DataRank · unranked

4 citations

Pallavi Gaur, Nicole Vo, Elizabeth M. Bradshaw, Vilas Menon, Steven G. Kernie +1 more

Complexity and graded regulation of neuronal cell type-specific alternative splicing revealed by single-cell RNA sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.27.428525

N/A

0DataRank · unranked

3 citations

Daniel F. Moakley, Shuonan Chen, Melissa G. McKenzie, Vilas Menon, Chaolin Zhang +1 more

Genotype-Phenotype Correlation of T Cell Subtypes Reveals Senescent and Cytotoxic Genes in Alzheimer’s Disease

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.19.464914

N/A

0DataRank · unranked

0 citations

Thomas Buttrick, Maria Cimpean, David A. Bennett, Vilas Menon, Elizabeth M. Bradshaw +3 more

TDP-43 loss and ALS-risk SNPs drive mis-splicing and depletion of UNC13A

Nature(2022)10.1038/s41586-022-04436-3

N/A

0DataRank · unranked

525 citations

Oscar G. Wilkins, Matthew J. Keuss, Sarah E. Hill, Matteo Zanovello, Weaverly Colleen Lee +90 more

Huntington disease oligodendrocyte maturation deficits revealed by single-nucleus RNAseq are rescued by thiamine-biotin supplementation

Nature Communications(2022)10.1038/s41467-022-35388-x

N/A

0DataRank · unranked

80 citations

Osama Al‐Dalahmah, Jie Wu, Maxwell P. Gold, Jack C. Reidling, Guomei Tang +24 more

Cell type-specific changes identified by single-cell transcriptomics in Alzheimer’s disease

Genome Medicine(2022)10.1186/s13073-022-01136-5

N/A

0DataRank · unranked

61 citations

Pallavi Gaur, Ivy M Kosater, Matti Lam, Dylan I. Lee, Jason Mares +4 more

Bulk and Single-Nucleus Transcriptomics Highlight Intra-Telencephalic and Somatostatin Neurons in Alzheimer’s Disease

Frontiers in Molecular Neuroscience(2022)10.3389/fnmol.2022.903175

N/A

0DataRank · unranked

44 citations

Yuxiao Chen, Vilas Menon, Yanling Wang, Julie A. Schneider, Philip L. De Jager +4 more

FMNL2 regulates gliovascular interactions and is associated with vascular risk factors and cerebrovascular pathology in Alzheimer’s disease

Acta Neuropathologica(2022)10.1007/s00401-022-02431-6

N/A

0DataRank · unranked

45 citations

Neha Raghavan, Prabesh Bhattarai, Tohid Siddiqui, Sanjeev Sariya, Dolly Reyes‐Dumeyer +19 more

Fragmentation of rest periods, astrocyte activation, and cognitive decline in older adults with and without Alzheimer's disease

Alzheimer s & Dementia(2022)10.1002/alz.12817

N/A

0DataRank · unranked

23 citations

Shreejoy J. Tripathy, Vilas Menon, Lei Yu, Aron S. Buchman, David A. Bennett +3 more

RNASE6 is a novel modifier of APOE-ε4 effects on cognition

Neurobiology of Aging(2022)10.1016/j.neurobiolaging.2022.06.011

N/A

0DataRank · unranked

11 citations

Rebecca L. Weiner, Logan Dumitrescu, Emily R. Mahoney, Shania Hansen, Vaibhav Janve +11 more

Human peripheral monocytes capture elements of the state of microglial activation in the brain

Research Square(2022)10.21203/rs.3.rs-1226021/v1

N/A

0DataRank · unranked

5 citations

Hans‐Ulrich Klein, Vilas Menon, Yiyi Ma, Yanling Wang, Milos Milic +5 more

Corticothalamic Neurons in Motor Cortex Have a Permissive Role in Motor Execution

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.20.508799

N/A

0DataRank · unranked

5 citations

Anders Nelson, Lin T. Tun, Kim An, Rani Shiao, Michael Kissner +3 more

Single-cell RNA-sequencing implicates venous endothelial cells as a source of VEGF-A-mediated neo-angiogenesis in neuroinflammation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.15.516660

N/A

0DataRank · unranked

3 citations

Saptarshi Biswas, Kuaile Zhao, Uğur Akcan, Mary Claire Tuohy, Michael Glendinning +8 more

Single nuclei RNAseq analysis of HD mouse models and human brain reveals impaired oligodendrocyte maturation and potential role for thiamine metabolism

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.27.497613

N/A

0DataRank · unranked

2 citations

Osama Al‐Dalahmah, Jie Wu, Maxwell P. Gold, Jack C. Reidling, Guomei Tang +23 more

Immune Response following FLASH and Conventional Radiation in Diffuse Midline Glioma (DMG)

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.09.515507

N/A

0DataRank · unranked

1 citations

Hanna E. Minns, Hong-Jian Wei, Weijia Fan, Andrea Webster-Carrion, Masih Tazhibi +20 more

A cellular taxonomy of the adult human spinal cord

Neuron(2023)10.1016/j.neuron.2023.01.007

N/A

0DataRank · unranked

206 citations

Kaya J.E. Matson, Li Li, Isabelle Hua, Joana Petrescu, Kristy Kang +29 more

INPP5D regulates inflammasome activation in human microglia

Nature Communications(2023)10.1038/s41467-023-42819-w

N/A

0DataRank · unranked

76 citations

Richard V. Pearse, Aimee J. Aylward, Nancy Ashour, Mariko Taga, Gizem Terzioğlu +12 more

Re-convolving the compositional landscape of primary and recurrent glioblastoma reveals prognostic and targetable tissue states

Nature Communications(2023)10.1038/s41467-023-38186-1

N/A

0DataRank · unranked

69 citations

Michael Argenziano, Adithya Kannan, Aayushi Mahajan, Julia Furnari, Fahad Paryani +23 more

Cell-type-specific regulation of APOE and CLU levels in human neurons by the Alzheimer’s disease risk gene SORL1

Cell Reports(2023)10.1016/j.celrep.2023.112994

N/A

0DataRank · unranked

51 citations

Aimee J. Aylward, Richard V. Pearse, Alexandra M Lish, Yi‐Chen Hsieh, Zachary M. Augur +17 more

Multi-omic characterization of brain changes in the vascular endothelial growth factor family during aging and Alzheimer's disease

Neurobiology of Aging(2023)10.1016/j.neurobiolaging.2023.01.010

N/A

0DataRank · unranked

49 citations

Logan Dumitrescu, Emily R. Mahoney, Annah M. Sclafani, Philip L. De Jager, Vilas Menon +11 more

Characterization of the responses of brain macrophages to focused ultrasound-mediated blood–brain barrier opening

Nature Biomedical Engineering(2023)10.1038/s41551-023-01107-0

N/A

0DataRank · unranked

44 citations

Sana Chintamen, Moshe J. Willner, M DiBenedetto, Rebecca L. Noel, Alec J. Batts +7 more

Associations of cortical SPP1 and ITGAX with cognition and common neuropathologies in older adults

Alzheimer s & Dementia(2023)10.1002/alz.13474

N/A

0DataRank · unranked

35 citations

Lei Yu, Xianli Shen, Yiguo Qiu, Shinya Tasaki, Artemis Iatrou +8 more

Genome-wide structural variant analysis identifies risk loci for non-Alzheimer’s dementias

Cell Genomics(2023)10.1016/j.xgen.2023.100316

N/A

0DataRank · unranked

32 citations

Ruth Chia, Jinhui Ding, Memoona Rasheed, Masashi Fujita, Vilas Menon +88 more

A structured evaluation of cryopreservation in generating single-cell transcriptomes from cerebrospinal fluid

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100533

N/A

0DataRank · unranked

15 citations

Tina Roostaei, Daniela Calini, Claudiu Diaconu, Samantha Epstein, Catarina Raposo +11 more

Focused Ultrasound-Mediated Blood–Brain Barrier Opening Best Promotes Neuroimmunomodulation through Brain Macrophage Redistribution

Neuroglia(2023)10.3390/neuroglia4020010

N/A

0DataRank · unranked

11 citations

Rebecca L. Noel, Hemali Phatnani, Vilas Menon, Elisa Konofagou, Alina R. Kline-Schoder

Vilas Menon

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