🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Stephan Saalfeld

Howard Hughes Medical Institute

ORCID: 0000-0002-4106-1761

Also affiliated with Janelia Research Campus

Biochemistry, Genetics and Molecular BiologyNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A scalable and modular automated pipeline for stitching of large electron microscopy datasets

eLife(2022)10.7554/elife.76534
Top 32%
0.626DataRank
Top 32%64 citations

Russel Torres, Daniel Kapner, Eric T. Trautman, Tim Fliss, Shamishtaa Seshamani +17 more

Papers

Driven by 11 papers — median percentile 68. Top paper: “OME-Zarr: a cloud-optimized bioimaging file format with international community support”.

OME-Zarr: a cloud-optimized bioimaging file format with international community support

Histochemistry and Cell Biology(2023)10.1007/s00418-023-02209-1
N/A
2.8DataRank · unranked
123 citations

Daniela Basurto-Lozada, Sébastien Besson, John Bogovic, Jordão Bragantini, Eva Maxfield Brown +64 more

Fiji: an open-source platform for biological-image analysis

Nature Methods(2012)10.1038/nmeth.2019
N/A
1.7DataRank · unranked
68810 citations

Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch +15 more

Local Shape Descriptors for Neuron Segmentation

10.1101/2021.01.18.427039
N/A
0.684DataRank · unranked
17 citations

Tri Nguyen, Diptodip Deb, Wei-Chung Allen Lee, Stephan Saalfeld, Srinivas C. Turaga +3 more

A scalable and modular automated pipeline for stitching of large electron microscopy datasets

eLife(2022)10.7554/elife.76534
Top 32%
0.626DataRank
Top 32%64 citations

Russel Torres, Daniel Kapner, Eric T. Trautman, Tim Fliss, Shamishtaa Seshamani +17 more

Architecture and dynamics of a desmosome–endoplasmic reticulum complex

Nature Cell Biology(2023)10.1038/s41556-023-01154-4
N/A
0.596DataRank · unranked
52 citations

W. Giang, Coryn L Hoffman, Jesse Aaron, Satya Khuon, Teng‐Leong Chew +15 more

Architecture and dynamics of a novel desmosome-endoplasmic reticulum organelle

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.07.499185
N/A
0.208DataRank · unranked
3 citations

W. Giang, Jesse Aaron, Satya Khuon, Teng‐Leong Chew, Stephan Preibisch +14 more

SciJava Ops: an improved algorithms framework for Fiji and beyond

Frontiers in Bioinformatics(2024)10.3389/fbinf.2024.1435733
N/A
0DataRank · unranked
0 citations

Curtis Rueden, Mark Hiner, Edward L. Evans, David Kolb, Marcel Wiedenmann +11 more

Transverse endoplasmic reticulum expansion in hereditary spastic paraplegia corticospinal axons

Human Molecular Genetics(2022)10.1093/hmg/ddac072
N/A
0DataRank · unranked
30 citations

Hui-Fang Hung, Natalia A. Batchenkova, Jonathon Nixon‐Abell, James Henderson, Pengli Zheng +10 more

Local shape descriptors for neuron segmentation

Nature Methods(2022)10.1038/s41592-022-01711-z
N/A
0DataRank · unranked
58 citations

Tri Nguyen, Diptodip Deb, Wei-Chung Allen Lee, Stephan Saalfeld, Srinivas C. Turaga +3 more

Petascale pipeline for precise alignment of images from serial section electron microscopy

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.25.485816
N/A
0DataRank · unranked
13 citations

Thomas Macrina, Nico Kemnitz, Manuel Castro, Barak Nehoran, Zhen Jia +8 more

Petascale pipeline for precise alignment of images from serial section electron microscopy

Nature Communications(2024)10.1038/s41467-023-44354-0
N/A
0DataRank · unranked
35 citations

Thomas Macrina, Nico Kemnitz, Manuel Castro, Barak Nehoran, Zhen Jia +8 more