Amanda Birmingham

Also affiliated with University of California San Diego

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 13 papers. Top paper: “Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission”.

Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission

Nature(2022)10.1038/s41586-022-05049-6

N/A

0.939DataRank · unranked

523 citations

Joshua I. Levy, Peter De Hoff, Greg Humphrey, Amanda Birmingham, Kristen Jepsen +95 more

Chromatin Accessibility and Transcriptional Differences in Human Stem Cell-Derived Early-Stage Retinal Organoids

Cells(2022)10.3390/cells11213412

N/A

0.330DataRank · unranked

8 citations

Devansh Agarwal, Kevin W. Mazo, Manan Chopra, Shawna L. Jurlina, Nicholas Dash +14 more

Integrated Genomic and Social Network Analyses of SARS-CoV-2 Transmission in the Healthcare Setting

Clinical Infectious Diseases(2024)10.1093/cid/ciad738

N/A

0.312DataRank · unranked

7 citations

Shira R. Abeles, Chris Longhurst, Lucy E. Horton, Frank Edward Myers, Lindsay Riggs-Rodriguez +58 more

Interleukin‐18 signaling promotes activation of hepatic stellate cells in mouse liver fibrosis

Hepatology(2022)10.1002/hep.32776

N/A

0DataRank · unranked

88 citations

Benedikt Kaufmann, María Eugenia Inzaugarat, Theresa Maria Holtmann, Lukas Geisler, Jana Hundertmark +15 more

The ViReflow pipeline enables user friendly large scale viral consensus genome reconstruction

Scientific Reports(2022)10.1038/s41598-022-09035-w

N/A

0DataRank · unranked

23 citations

Kathleen M. Fisch, Amanda Birmingham, Peter DeHoff, G Yeo, Kristen Jepsen +3 more

Safer at school early alert: an observational study of wastewater and surface monitoring to detect COVID-19 in elementary schools

The Lancet Regional Health - Americas(2023)10.1016/j.lana.2023.100449

N/A

0DataRank · unranked

40 citations

Smruthi Karthikeyan, Tommi Gaines, Richard S. Garfein, Rodolfo A. Salido, Victor Cantu +66 more

Genomic surveillance reveals dynamic shifts in the connectivity of COVID-19 epidemics

Cell(2023)10.1016/j.cell.2023.11.024

N/A

0DataRank · unranked

13 citations

Gabriel W. Hassler, Ezra Kurzban, Madison Schwab, Sarah A. Perkins, Karthik Gangavarapu +95 more

Genomic surveillance reveals dynamic shifts in the connectivity of COVID-19 epidemics

medRxiv(2023)10.1101/2023.03.14.23287217

N/A

0DataRank · unranked

3 citations

Gabriel W. Hassler, Ezra Kurzban, Madison Schwab, Sarah A. Perkins, Karthik Gangavarapu +95 more

Wastewater-integrated pathogen surveillance dashboards enable real-time, transparent, and interpretable public health risk assessment and dissemination

PLOS Global Public Health(2025)10.1371/journal.pgph.0004443

N/A

0DataRank · unranked

7 citations

Joshua I. Levy, Nathaniel L. Matteson, Nkosenhle Ndlovu, Phindile Ntuli, Adam Baer +23 more

Inflammation-driven deaminase deregulation fuels human pre-leukemia stem cell evolution

Cell Reports(2021)10.1016/j.celrep.2020.108670

N/A

0DataRank · unranked

46 citations

Jane Isquith, Luisa Ladel, Adam Mark, Frida Holm, Cayla Mason +25 more

Phylogeographic and genetic network assessment of COVID-19 mitigation protocols on SARS-CoV-2 transmission in university campus residences

EBioMedicine(2025)10.1016/j.ebiom.2025.105729

N/A

0DataRank · unranked

1 citations

Tetyana I. Vasylyeva, Robert J. Wood, Kalen Cantrell, Soraya Piña Contreras, Aryeh Feldheim +44 more

Interspecies transcriptomics identify genes that underlie disproportionate foot growth in jerboas

Current Biology(2021)10.1016/j.cub.2021.10.063

N/A

0DataRank · unranked

26 citations

Virag Sharma, Pushpanathan Muthuirulan, Stanley J. Neufeld, Mai P. Tran, Haydee L. Gutierrez +8 more

Wastewater and surface monitoring to detect COVID-19 in elementary school settings: The Safer at School Early Alert project

medRxiv(2021)10.1101/2021.10.19.21265226

N/A

0DataRank · unranked

23 citations

Smruthi Karthikeyan, Tommi Gaines, Richard S. Garfein, Rodolfo A. Salido, Victor Cantu +40 more