Salem Malikić

Also affiliated with Foundation for the National Institutes of Health, National Cancer Institute, Center for Cancer Research

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

10.5Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Pan-cancer analysis of whole genomes

Nature(2020)10.1038/s41586-020-1969-6

Top 3%

5.9DataRank

Top 3%3307 citations

Lauri A. Aaltonen, Federico Abascal, Adam Abeshouse, Hiroyuki Aburatani, David J. Adams +1244 more

Papers

Driven by 19 papers — median percentile 96. Top paper: “Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes”.

Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes

Cell(2021)10.1016/j.cell.2021.03.009

N/A

7.3DataRank · unranked

560 citations

Ignaty Leshchiner, Kerstin Haase, Maxime Tarabichi, Jeff Wintersinger, Amit G. Deshwar +64 more

Pan-cancer analysis of whole genomes

Nature(2020)10.1038/s41586-020-1969-6

Top 3%

5.9DataRank

Top 3%3307 citations

Lauri A. Aaltonen, Federico Abascal, Adam Abeshouse, Hiroyuki Aburatani, David J. Adams +1244 more

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

Nature(2020)10.1038/s41586-020-1965-x

Top 5%

4.6DataRank

Top 5%668 citations

Federico Abascal, Jeremiah A. Wala, Ofer Shapira, Grace Tiao, Henrik Hornshøj +1240 more

The evolutionary history of 2,658 cancers

Nature(2020)10.1038/s41586-019-1907-7

N/A

1.1DataRank · unranked

1106 citations

Clemency Jolly, Ignaty Leshchiner, Stefan C. Dentro, Santiago Gonzalez, Daniel Rosebrock +59 more

Fast intratumor heterogeneity inference from single-cell sequencing data

Nature Computational Science(2022)10.1038/s43588-022-00298-x

N/A

0.607DataRank · unranked

14 citations

Farid Rashidi Mehrabadi, Erfan Sadeqi Azer, Eva Pérez‐Guijarro, Kerrie L. Marie, Maxwell P. Lee +7 more

Severus detects somatic structural variation and complex rearrangements in cancer genomes using long-read sequencing

Nature Biotechnology(2025)10.1038/s41587-025-02618-8

N/A

0.505DataRank · unranked

28 citations

Asher Bryant, Tanveer Ahmad, Byunggil Yoo, Sergey Aganezov, Anton Goretsky +36 more

PhISCS-BnB: a fast branch and bound algorithm for the perfect tumor phylogeny reconstruction problem

Bioinformatics(2020)10.1093/bioinformatics/btaa464

N/A

0.477DataRank · unranked

23 citations

Farid Rashidi Mehrabadi, Salem Malikić, Xuan Cindy Li, Osnat Bartok, Kevin Litchfield +12 more

Single-cell methylation sequencing data reveal succinct metastatic migration histories and tumor progression models

Genome Research(2023)10.1101/gr.277608.122

N/A

0.373DataRank · unranked

11 citations

Xuan Cindy Li, Farid Rashidi Mehrabadi, Alejandro A. Schäffer, Drew Pratt, David R. Crawford +8 more

Author Correction: Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis

Communications Biology(2022)10.1038/s42003-022-03769-z

N/A

0.165DataRank · unranked

2 citations

Lars Feuerbach, Chen Hong, David Mas-Ponte, Randi Istrup Pedersen, PCAWG Drivers and Functional Interpretation Group +1255 more

Single-cell methylation sequencing data reveal succinct metastatic migration histories and tumor progression models

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.22.436475

N/A

0.165DataRank · unranked

2 citations

Xuan Cindy Li, Farid Rashidi Mehrabadi, Alejandro A. Schäffer, Drew Pratt, David R. Crawford +8 more

Profiles of expressed mutations in single cells reveal subclonal expansion patterns and therapeutic impact of intratumor heterogeneity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.26.437185

N/A

0DataRank · unranked

10 citations

Kerrie L. Marie, Eva Pérez‐Guijarro, Salem Malikić, Erfan Sadeqi Azer, Howard H. Yang +14 more

Wakhan: reconstruction of chromosome-scale copy number profiles of tumor genomes with long-read sequencing

medRxiv(2025)10.64898/2025.12.11.25342098

N/A

0DataRank · unranked

0 citations

Ayse G. Keskus, Sergey Aganezov, Anton Goretsky, Isabel Rodriguez, Byunggil Yoo +23 more

Tumor Phylogeny Topology Inference via Deep Learning

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.07.938852

N/A

0DataRank · unranked

3 citations

Mohammad Haghir Ebrahimabadi, Salem Malikić, Roni Khardon, S. Cenk Şahinalp, Erfan Sadeqi Azer

Identification of conserved evolutionary trajectories in tumors

Bioinformatics(2020)10.1093/bioinformatics/btaa453

N/A

0DataRank · unranked

22 citations

Raunak Shrestha, Salem Malikić, Colin C. Collins, Kevin Litchfield, Samra Turajlic +2 more

Stochastic modeling of single-cell gene expression adaptation reveals non-genomic contribution to evolution of tumor subclones

Cell Systems(2024)10.1016/j.cels.2024.11.013

N/A

0DataRank · unranked

14 citations

Soumitra Pal, Farid Rashidi Mehrabadi, Salem Malikić, Charli Gruen, Antonella Sassano +7 more

Severus: accurate detection and characterization of somatic structural variation in tumor genomes using long reads

medRxiv(2024)10.1101/2024.03.22.24304756

N/A

0DataRank · unranked

21 citations

Asher Bryant, Tanveer Ahmad, Byunggil Yoo, Sergey Aganezov, Anton Goretsky +33 more

Determining Optimal Placement of Copy Number Aberration Impacted Single Nucleotide Variants in a Tumor Progression History

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.10.584318

N/A

0DataRank · unranked

0 citations

Suraj Joshi, Welles Robinson, Paul F. Robbins, Russell Schwartz, S. Cenk Şahinalp +2 more

Author Correction: Combined burden and functional impact tests for cancer driver discovery using DriverPower

Nature Communications(2022)10.1038/s41467-022-32343-8

N/A

0DataRank · unranked

0 citations

PCAWG Drivers and Functional Interpretation Working Group, Federico Abascal, Samirkumar B. Amin, Pratiti Bandopadhayay, Rameen Beroukhim +1242 more

PhISCS-BnB: A Fast Branch and Bound Algorithm for the Perfect Tumor Phylogeny Reconstruction Problem

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.06.938043

N/A

0DataRank · unranked

2 citations

Farid Rashidi Mehrabadi, Xuan Cindy Li, Salem Malikić, Alejandro A. Schäffer, E. Michael Gertz +8 more

Salem Malikić

Indexed papers

Top data-sharing exemplar

Papers