Daniel P. Depledge

Also affiliated with German Center for Infection Research, Institute of Virology of the Slovak Academy of Sciences, New York University

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 21 papers. Top paper: “Direct RNA sequencing reveals m6A modifications on adenovirus RNA are necessary for efficient splicing”.

Direct RNA sequencing reveals m6A modifications on adenovirus RNA are necessary for efficient splicing

Nature Communications(2020)10.1038/s41467-020-19787-6

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213 citations

Katharina E. Hayer, Alexa B. R. McIntyre, Nandan S. Gokhale, Jonathan S. Abebe, Ashley N. Della Fera +6 more

Decoding the Architecture of the Varicella-Zoster Virus Transcriptome

mBio(2020)10.1128/mbio.01568-20

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73 citations

Tomohiko Sadaoka, Judith Breuer, Georges M. G. M. Verjans, Werner J. D. Ouwendijk, Daniel P. Depledge +1 more

Varicella-zoster virus VLT-ORF63 fusion transcript induces broad viral gene expression during reactivation from neuronal latency

Nature Communications(2020)10.1038/s41467-020-20031-4

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53 citations

Daniel P. Depledge, Labchan Rajbhandari, T. Rovis, Stipan Jonjić, Judith Breuer +4 more

Analysis of the reiteration regions (R1 to R5) of varicella-zoster virus

Virology(2020)10.1016/j.virol.2020.03.008

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17 citations

Daniel P. Depledge, Terry Fei Fan Ng, Jessica Leung, Mark Quinlivan, Kay Radford +7 more

Decoding the architecture of the varicella-zoster virus transcriptome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.25.110965

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3 citations

Tomohiko Sadaoka, Judith Breuer, Georges M. G. M. Verjans, Werner J. D. Ouwendijk, Daniel P. Depledge +1 more

Expression of varicella-zoster virus VLT-ORF63 fusion transcript induces broad viral gene expression during reactivation from neuronal latency

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.11.294280

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3 citations

Daniel P. Depledge, Labchan Rajbhandari, T. Rovis, Stipan Jonjić, Judith Breuer +4 more

Widespread remodeling of the m 6 A RNA-modification landscape by a viral regulator of RNA processing and export

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2104805118

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75 citations

Daniel P. Depledge, Jonathan S. Abebe, Stephen A. Rice, Ian Mohr, Angus C. Wilson +1 more

Enteric viruses evoke broad host immune responses resembling those elicited by the bacterial microbiome

Cell Host & Microbe(2021)10.1016/j.chom.2021.03.015

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73 citations

T. G. Heaney, Adriana Rosas-Villegas, Jessica A. Neil, Serre-Yu Wong, Judy J. Brown +6 more

Single‐cell transcriptomics identifies Gadd45b as a regulator of herpesvirus‐reactivating neurons

EMBO Reports(2021)10.15252/embr.202153543

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26 citations

Kalanghad Puthankalam Srinivas, Shuoshuo Wang, Moses V. Chao, Timothée Lionnet, Ian Mohr +4 more

The architecture of the simian varicella virus transcriptome

PLoS Pathogens(2021)10.1371/journal.ppat.1010084

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10 citations

Georges M. G. M. Verjans, Tamana Mehraban, Ilhem Messaoudi, Daniel P. Depledge, Werner J. D. Ouwendijk +1 more

Novel viral splicing events and open reading frames revealed by long-read direct RNA sequencing of adenovirus transcripts

PLoS Pathogens(2022)10.1371/journal.ppat.1010797

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33 citations

Robert T. Steinbock, Richard Lauman, Matthew Charman, Katharina E. Hayer, Namrata Kumar +8 more

An eIF3d-dependent switch regulates HCMV replication by remodeling the infected cell translation landscape to mimic chronic ER stress

Cell Reports(2022)10.1016/j.celrep.2022.110767

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22 citations

Daniel P. Depledge, Hannah M. Burgess, Ian Mohr, Letitia Thompson

DLK-dependent biphasic reactivation of herpes simplex virus latency established in the absence of antivirals

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.25.482019

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3 citations

Husain Y. Merchant, Austin R. Schinlever, Aleksandra Babnis, Daniel P. Depledge, Angus C. Wilson +2 more

CCR4‐NOT differentially controls host versus virus poly(a)‐tail length and regulates HCMV infection

EMBO Reports(2023)10.15252/embr.202256327

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10 citations

Rebecca Grande, Sofia Riccio, Ikshitaa Dinesh, G. Sebastiaan Winkler, Daniel P. Depledge +2 more

Reanalysis of single-cell RNA sequencing data does not support herpes simplex virus 1 latency in non-neuronal ganglionic cells in mice

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.17.549345

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2 citations

Pavitra Roychoudhury, Anthony L. Cunningham, Keith R. Jerome, David M. Koelle, Paul R. Kinchington +5 more

Histone H2A variant H2A.B is enriched in transcriptionally active HSV-1 lytic chromatin

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.22.573075

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0 citations

Sarah Saddoris, Arryn K. Owens, Rebecca Gibeault, Daniel P. Depledge, Luis M. Schang +1 more

Viral modulation of type II interferon increases T cell adhesion and virus spread

Nature Communications(2024)10.1038/s41467-024-49657-4

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11 citations

Nina Plückebaum, George Ssebyatika, Sarah Beyer, Lucas Mendes-Monteiro, Jiayi Wang +13 more

Histone H2A variant H2A.B is enriched in transcriptionally active and replicating HSV-1 lytic chromatin

Journal of Virology(2024)10.1128/jvi.02015-23

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8 citations

Sarah Saddoris, Arryn K. Owens, Rebecca Gibeault, Daniel P. Depledge, Luis M. Schang +1 more

Reanalysis of single-cell RNA sequencing data does not support herpes simplex virus 1 latency in non-neuronal ganglionic cells in mice

Journal of Virology(2024)10.1128/jvi.01858-23

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7 citations

Pavitra Roychoudhury, Anthony L. Cunningham, Keith R. Jerome, David M. Koelle, Paul R. Kinchington +5 more

Reply to Wang et al., “Ample evidence for the presence of HSV-1 LAT in non-neuronal ganglionic cells of mice and humans”

Journal of Virology(2024)10.1128/jvi.00520-24

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0 citations

Pavitra Roychoudhury, Anthony L. Cunningham, Keith R. Jerome, David M. Koelle, Paul R. Kinchington +5 more

Detection of enterovirus RNA in pancreas and lymphoid tissues of organ donors with type 1 diabetes

Diabetologia(2025)10.1007/s00125-025-06359-w

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6 citations

Sami Oikarinen, Sofia Morfopoulou, Maarit Oikarinen, Ashlie Renner, Daniel P. Depledge +11 more