Anindya Dutta

Also affiliated with Indian Institute of Technology Bombay, University of Alabama at Birmingham, Birla Institute of Technology and Science, Pilani - Goa Campus, Birla Institute of Technology and Science, Pilani

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

UNC Libraries(2020)10.17615/d7n3-p041

Top 100%

0DataRank

Top 100%0 citations

Christopher M. Taylor, Saurabh Asthana, J Stamatoyannopoulos, Michael P. Snyder, Ewan Birney +26 more

Papers

Driven by 45 papers — median percentile 0. Top paper: “Integrative analysis of DNA replication origins and ORC-/MCM-binding sites in human cells reveals a lack of overlap”.

Integrative analysis of DNA replication origins and ORC-/MCM-binding sites in human cells reveals a lack of overlap

eLife(2023)10.7554/elife.89548

N/A

0.809DataRank · unranked

30 citations

Zhenjia Wang, Zhangli Su, Etsuko Shibata, Yoshiyuki Shibata, Anindya Dutta +2 more

A 36-base hairpin within lncRNA DRAIC, which is modulated by alternative splicing, interacts with the IKKα coiled-coil domain and inhibits NF-κB and tumor cell phenotypes

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.110172

N/A

0.208DataRank · unranked

3 citations

Yuechuan Chen, Divya Sahu, Roza Przanowska, Mujawar Aaiyas, Chase A. Weidmann +4 more

The pan-cancer landscape of prognostic germline variants in 10,582 patients

Genome Medicine(2020)10.1186/s13073-020-0718-7

N/A

0DataRank · unranked

43 citations

Roza Przanowska, Shashi Kiran, Zhangli Su, Shekhar Saha, Briana Wilson +12 more

What Is Extrachromosomal Circular DNA and What Does It Do?

Clinical Chemistry(2020)10.1093/clinchem/hvaa096

N/A

0DataRank · unranked

29 citations

Anindya Dutta, Anton G. Henssen, Y. M. Dennis Lo, Paul S. Mischel, Birgitte Regenberg +1 more

Targeted CRISPR screening identifies PRMT5 as synthetic lethality combinatorial target with gemcitabine in pancreatic cancer cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.25.112896

N/A

0DataRank · unranked

7 citations

Jiekun Yang, Sara J. Adair, Cem Kuscu, Kyung Yong Lee, William J. Kane +9 more

EccDNA formation is dependent on MMEJ, repressed by c-NHEJ pathway, and stimulated by DNA double-strand break

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.03.410480

N/A

0DataRank · unranked

3 citations

Pumoli Malapati, Rebeka Eki, Tarek Abbas, Anindya Dutta, Teressa Paulsen

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

UNC Libraries(2020)10.17615/d7n3-p041

Top 100%

0DataRank

Top 100%0 citations

Christopher M. Taylor, Saurabh Asthana, J Stamatoyannopoulos, Michael P. Snyder, Ewan Birney +26 more

Production of Extrachromosomal MicroDNAs Is Linked to Mismatch Repair Pathways and Transcriptional Activity

UNC Libraries(2020)10.17615/yv41-9d10

N/A

0DataRank · unranked

0 citations

Shunichi Takeda, Anindya Dutta, Yoshiyuki Shibata, Yuh Hwa Wang, Yves Pommier +4 more

Sequential replication-coupled destruction at G1/S ensures genome stability

UNC Libraries(2020)10.17615/6xqf-qc60

N/A

0DataRank · unranked

0 citations

Gavin D. Grant, Jeanette Gowen Cook, Kate E. Coleman, Jeremy E. Purvis, Rachel A. Haggerty +5 more

The tumor-suppressive long noncoding RNA DRAIC inhibits protein translation and induces autophagy by activating AMPK

Journal of Cell Science(2021)10.1242/jcs.259306

N/A

0DataRank · unranked

32 citations

Ying Zhang, Briana Wilson, Roger Abounader, Anindya Dutta, Shekhar Saha

Germline variants predictive of tumor mutational burden and immune checkpoint inhibitor efficacy

iScience(2021)10.1016/j.isci.2021.102248

N/A

0DataRank · unranked

13 citations

Aakrosh Ratan, Anindya Dutta, Ajay Chatrath

Chk1 promotes non-homologous end joining in G1 through direct phosphorylation of ASF1A

Cell Reports(2021)10.1016/j.celrep.2020.108680

N/A

0DataRank · unranked

17 citations

Anindya Dutta, Kyung Yong Lee

HPVE6-USP46 Mediated Cdt2 Stabilization Reduces Set8 Mediated H4K20-Methylation to Induce Gene Expression Changes

Cancers(2021)10.3390/cancers14010030

N/A

0DataRank · unranked

11 citations

Briana Wilson, Shekhar Saha, Julia Graff, Anindya Dutta, Shashi Kiran

Short-term diet intervention alters the small non-coding RNA (sncRNA) landscape of human sperm

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.08.451257

N/A

0DataRank · unranked

8 citations

Alexandra Kermack, Mark A. Burton, Pei Fang Tan, Jason Huan, Tessa P. X. Yoo +16 more

Distinct MUNC lncRNA structural domains regulate transcription of different promyogenic factors

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.22.449443

N/A

0DataRank · unranked

1 citations

Chase A. Weidmann, Shekhar Saha, Magdalena A. Cichewicz, Kate Jensen, Piotr Przanowski +5 more

tRForest: a novel random forest-based algorithm for tRNA-derived fragment target prediction

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.13.472430

N/A

0DataRank · unranked

0 citations

Briana Wilson, Laine Marrah, Zhangli Su, Shekhar Saha, Pankaj Kumar +3 more

TRMT6/61A-dependent base methylation of tRNA-derived fragments regulates gene-silencing activity and the unfolded protein response in bladder cancer

Nature Communications(2022)10.1038/s41467-022-29790-8

N/A

0DataRank · unranked

130 citations

Ida Monshaugen, Briana Wilson, Fengbin Wang, Arne Klungland, Rune Ougland +2 more

Distinct MUNC lncRNA structural domains regulate transcription of different promyogenic factors

Cell Reports(2022)10.1016/j.celrep.2022.110361

N/A

0DataRank · unranked

37 citations

Chase A. Weidmann, Shekhar Saha, Magdalena A. Cichewicz, Kate Jensen, Piotr Przanowski +6 more

Function and Therapeutic Implications of tRNA Derived Small RNAs

Frontiers in Molecular Biosciences(2022)10.3389/fmolb.2022.888424

N/A

0DataRank · unranked

25 citations

Anindya Dutta, Briana Wilson

Characterization of novel small non-coding RNAs and their modifications in bladder cancer using an updated small RNA-seq workflow

Frontiers in Molecular Biosciences(2022)10.3389/fmolb.2022.887686

N/A

0DataRank · unranked

14 citations

Ida Monshaugen, Arne Klungland, Rune Ougland, Anindya Dutta, Zhangli Su

Integrated bioinformatic pipeline using whole-exome and RNAseq data to identify germline variants correlated with cancer

STAR Protocols(2022)10.1016/j.xpro.2022.101273

N/A

0DataRank · unranked

1 citations

Ajay Chatrath, Aakrosh Ratan, Anindya Dutta, Divya Sahu

XRN2 suppresses aberrant entry of tRNA trailers into argonaute in humans and Arabidopsis

PLoS Genetics(2023)10.1371/journal.pgen.1010755

N/A

0DataRank · unranked

6 citations

Zhangli Su, Pankaj Kumar, Anindya Dutta, Briana Wilson

Cryptic lncRNA-encoded ORFs: A hidden source of regulatory proteins

Journal of Clinical Investigation(2023)10.1172/jci167271

N/A

0DataRank · unranked

3 citations

Hui Li, Roger Abounader, Anindya Dutta

Depletion of the m1A writer TRMT6/TRMT61A reduces proliferation and resistance against cellular stress in bladder cancer

Frontiers in Oncology(2024)10.3389/fonc.2023.1334112

N/A

0DataRank · unranked

21 citations

Luisa Luna, Jayden Rhodes, Felicia Iselin Svensson Kristiansen, Anna Lång, Stig Ove Bøe +5 more

Development of a polygenic score predicting drug resistance and patient outcome in breast cancer

npj Precision Oncology(2024)10.1038/s41698-024-00714-7

N/A

0DataRank · unranked

4 citations

Jeffrey Shi, I. Rueda, Ajay Chatrath, Anindya Dutta, Divya Sahu

Integrative analysis of DNA replication origins and ORC-/MCM-binding sites in human cells reveals a lack of overlap

eLife(2024)10.7554/elife.89548.4

N/A

0DataRank · unranked

5 citations

Zhenjia Wang, Zhangli Su, Etsuko Shibata, Yoshiyuki Shibata, Anindya Dutta +2 more

TGIRT-seq to profile tRNA-derived RNAs and associated RNA modifications

Methods in enzymology on CD-ROM/Methods in enzymology(2024)10.1016/bs.mie.2024.11.001

N/A

0DataRank · unranked

2 citations

Monima Anam, Anindya Dutta, Zhangli Su, Abigail Grace Johnston

Specific origin selection and excess functional MCM2-7 loading in ORC-deficient cells

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.30.621095

N/A

0DataRank · unranked

5 citations

Mihaela Peycheva, Etsuko Shibata, Daniel Malzl, Rushad Pavri, Anindya Dutta +1 more

Chromatin regulator HELLS mediates SSB repair and responses to DNA alkylation damage

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.19.629292

N/A

0DataRank · unranked

4 citations

Christine Wright, Estanislao Peixoto, Etsuko Shibata, Asad Ullah Khan, Yong Li +13 more

DNA replication in primary hepatocytes without the six-subunit ORC

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.04.588006

N/A

0DataRank · unranked

1 citations

Yuechuan Chen, Takayuki-Okano Uchida, Etsuko Shibata, Xiaoxiao Hao, Isaac Segura Rueda +7 more

sRNA-Effector: A tool to expedite discovery of small RNA regulators

iScience(2024)10.1016/j.isci.2024.109300

N/A

0DataRank · unranked

0 citations

Fatemeh Esmaeili, Matthew S. Parsons, Wafa Salah, Zhangli Su, Anindya Dutta +1 more

A 36-base hairpin within lncRNA DRAIC , which is modulated by alternative splicing, interacts with the IKKα coiled-coil domain and inhibits NF-κB and tumor cell phenotypes

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.23.629241

N/A

0DataRank · unranked

0 citations

Yuechuan Chen, Divya Sahu, Roza Przanowska, Mujawar Aaiyas, Chase A. Weidmann +4 more

DNA replication in primary hepatocytes without the six-subunit ORC

eLife(2024)10.7554/elife.102915

N/A

0DataRank · unranked

0 citations

Yuechuan Chen, Takayuki-Okano Uchida, Etsuko Shibata, Xiaoxiao Hao, Isaac Segura Rueda +7 more

Reviewer #2 (Public review): DNA replication in primary hepatocytes without the six-subunit ORC

(2024)10.7554/elife.102915.1.sa2

N/A

0DataRank · unranked

0 citations

Yuechuan Chen, Takayuki-Okano Uchida, Etsuko Shibata, Xiaoxiao Hao, Isaac Segura Rueda +7 more

Short-term diet intervention comprising of olive oil, vitamin D, and omega-3 fatty acids alters the small non-coding RNA (sncRNA) landscape of human sperm

Scientific Reports(2025)10.1038/s41598-024-83653-4

N/A

0DataRank · unranked

10 citations

Mark A. Burton, Alexandra Kermack, Pei Fang Tan, Jason Huan, Tessa P. X. Yoo +17 more

Tousled-like kinase loss confers PARP inhibitor resistance in BRCA1-mutated cancers by impeding non-homologous end joining repair

Molecular Medicine(2025)10.1186/s10020-025-01066-z

N/A

0DataRank · unranked

8 citations

Banseok Kim, Ji‐Hyeon Jeon, Jonghyun Lee, Hyeji Jang, Minjae Baek +5 more

DNA replication in primary hepatocytes without the six-subunit ORC

eLife(2025)10.7554/elife.102915.3

N/A

0DataRank · unranked

4 citations

Yuechuan Chen, Takayuki-Okano Uchida, Etsuko Shibata, Xiaoxiao Hao, Isaac Segura Rueda +7 more

The Secret Life of N1-methyladenosine: A Review on its Regulatory Functions

Journal of Molecular Biology(2025)10.1016/j.jmb.2025.169099

N/A

0DataRank · unranked

4 citations

Xi-Sheng Liu, Anindya Dutta, Zhangli Su, Nhi Yen Tran Nguyen

A general framework to over-express tRNA-derived fragments from their parental tRNAs in mammalian cells

Methods in enzymology on CD-ROM/Methods in enzymology(2025)10.1016/bs.mie.2024.11.008

N/A

0DataRank · unranked

1 citations

Kumarjeet Banerjee, Zhangli Su, Anindya Dutta, Fatemeh Esmaeili

Reviewer #1 (Public review): DNA replication in primary hepatocytes without the six-subunit ORC

(2025)10.7554/elife.102915.2.sa3

N/A

0DataRank · unranked

0 citations

Yuechuan Chen, Takayuki-Okano Uchida, Etsuko Shibata, Xiaoxiao Hao, Isaac Segura Rueda +7 more

Regulation of epigenetics and chromosome structure by human ORC2

Cell Reports(2025)10.1016/j.celrep.2025.115816

N/A

0DataRank · unranked

0 citations

Mengxue Tian, Etsuko Shibata, Yoshiyuki Shibata, Tianyi Yang, Zhenjia Wang +4 more

Gain-of-function mutant p53 regulates long-noncoding RNA LINC00643 to modulate HIF1α in glioblastoma

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.16.676559

N/A

0DataRank · unranked

0 citations

Fang Yuan, Myron Gibert, Collin Dube, Kadie Hudson, Cassandra Grello +9 more

Noncanonical Roles of tRNAs: tRNA Fragments and Beyond

Annual Review of Genetics(2020)10.1146/annurev-genet-022620-101840

N/A

0DataRank · unranked

252 citations

Briana Wilson, Pankaj Kumar, Anindya Dutta, Zhangli Su

PATTY corrects open-chromatin bias for improved bulk and single-cell CUT&Tag profiling

Research Square(2025)10.21203/rs.3.rs-7632127/v1

N/A

0DataRank · unranked

0 citations

Shengen Shawn Hu, Zhangli Su, Lin Liu, Qingying Chen, Megan Grieco +3 more

Germline Variants That Affect Tumor Progression

Trends in Genetics(2020)10.1016/j.tig.2020.10.005

N/A

0DataRank · unranked

61 citations

Aakrosh Ratan, Anindya Dutta, Ajay Chatrath

Anindya Dutta

Indexed papers

Top data-sharing exemplar

Papers