🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Darryl Shibata

University of Southern California

ORCID: 0000-0002-4567-1639
Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile
0.112Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Human brain ancestral barcodes

eLife(2025)10.7554/elife.101163.3
Top 72%
0.112DataRank
Top 72%1 citations

Darryl Shibata

Papers

Driven by 23 papers — median percentile 0. Top paper: “Growth Dynamics of Ductal Carcinoma in Situ Recapitulate Normal Breast Development”.

Growth Dynamics of Ductal Carcinoma in Situ Recapitulate Normal Breast Development

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.01.560370
N/A
0.338DataRank · unranked
4 citations

Matthew A. Greenwald, Inmaculada C. Sorribes, Lorraine King, Allison Hall, Joseph Geradts +14 more

Human brain ancestral barcodes

eLife(2025)10.7554/elife.101163.3
Top 72%
0.112DataRank
Top 72%1 citations

Darryl Shibata

Epigenetic Conservation Is a Beacon of Function: An Analysis Using Methcon5 Software for Studying Gene Methylation

JCO Clinical Cancer Informatics(2020)10.1200/cci.19.00109
N/A
0DataRank · unranked
5 citations

Chao Xia, Kimberly D. Siegmund, Darryl Shibata, Paul Marjoram, Emil Hvitfeldt

Negative selection may cause grossly altered but broadly stable karyotypes in metastatic colorectal cancer

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.26.007138
N/A
0DataRank · unranked
18 citations

Salpie Nowinski, George D. Cresswell, Maximilian Mossner, Abhirup Banerjee, Bingxin Lu +48 more

A Bayesian hierarchical model to estimate DNA methylation conservation in colorectal tumors

Bioinformatics(2021)10.1093/bioinformatics/btab637
N/A
0DataRank · unranked
7 citations

Yanlin Ma, Lidea Shahidi, Sayan Mukherjee, Andrew S. Allen, Darryl Shibata +2 more

Functional human genes typically exhibit epigenetic conservation

PLoS ONE(2021)10.1371/journal.pone.0253250
N/A
0DataRank · unranked
1 citations

Paul Marjoram, Kimberly D. Siegmund, Darryl Shibata, Daniel Rud

Reconstruction of Contemporary Human Stem Cell Dynamics with Oscillatory Molecular Clocks

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.15.435426
N/A
0DataRank · unranked
0 citations

Ryan O. Schenck, Dan Weisenberger, Christopher Kimberley, Alison Berner, Jacob Househam +12 more

Phenotypic plasticity and genetic control in colorectal cancer evolution

Nature(2022)10.1038/s41586-022-05311-x
N/A
0DataRank · unranked
185 citations

Timon Heide, George D. Cresswell, Inmaculada Spiteri, Christopher Kimberley, Luís Zapata +28 more

The co-evolution of the genome and epigenome in colorectal cancer

Nature(2022)10.1038/s41586-022-05202-1
N/A
0DataRank · unranked
127 citations

Jacob Househam, George D. Cresswell, Inmaculada Spiteri, Claire Lynn, Maximilian Mossner +26 more

Fluctuating methylation clocks for cell lineage tracing at high temporal resolution in human tissues

Nature Biotechnology(2022)10.1038/s41587-021-01109-w
N/A
0DataRank · unranked
71 citations

Ryan O. Schenck, Daniel J. Weisenberger, Christopher Kimberley, Alison Berner, Jacob Househam +12 more

Testing Adaptive Therapy Protocols using Gemcitabine and Capecitabine on a Mouse Model of Endocrine-Resistant Breast Cancer

Murdoch Research Repository (Murdoch University)(2023)10.1101/2023.09.18.558136
N/A
0DataRank · unranked
3 citations

Ruthanne Teo, Luke Foster, Daniel Saha, Lida A. Mina, Donald W. Northfelt +8 more

Epigenetic Conservation Infers That Colorectal Cancer Progenitors Retain The Phenotypic Plasticity Of Normal Colon

Research Square(2023)10.21203/rs.3.rs-2609517/v1
N/A
0DataRank · unranked
2 citations

Kimberly D. Siegmund, Darryl Shibata, Kelly Street

Testing Adaptive Therapy Protocols Using Gemcitabine and Capecitabine in a Preclinical Model of Endocrine-Resistant Breast Cancer

Cancers(2024)10.3390/cancers16020257
N/A
0DataRank · unranked
10 citations

Ruthanne Teo, Luke Foster, Daniel Saha, Lida A. Mina, Donald W. Northfelt +8 more

Developmental hematopoietic stem cell variation explains clonal hematopoiesis later in life

Nature Communications(2024)10.1038/s41467-024-54711-2
N/A
0DataRank · unranked
10 citations

Jazlyn A. Mooney, Darryl Shibata, Adam L. MacLean, Jesse Kreger

Mapping the Temporal Landscape of Breast Cancer Using Epigenetic Entropy

Research Square(2024)10.21203/rs.3.rs-5119308/v1
N/A
0DataRank · unranked
1 citations

Daniel Monyak, S. Holloway, Graham J. Gumbert, Lars J. Grimm, E. Shelley Hwang +3 more

Human brain ancestral barcodes

eLife(2024)10.7554/elife.101163
Top 100%
0DataRank
Top 100%0 citations

Darryl Shibata

Human Brain Barcodes

eLife(2024)10.7554/elife.101163.1
Top 100%
0DataRank
Top 100%0 citations

Darryl Shibata

Author response: Human Brain Ancestral Barcodes

(2024)10.7554/elife.101163.2.sa0
Top 100%
0DataRank
Top 100%0 citations

Darryl Shibata

Mapping the temporal landscape of breast cancer using epigenetic entropy

Communications Biology(2025)10.1038/s42003-025-08867-2
N/A
0DataRank · unranked
2 citations

Shannon T. Holloway, Graham J. Gumbert, Lars J. Grimm, E. Shelley Hwang, Jeffrey R. Marks +3 more

Spatially Discontinuous Mutation Topographies in Ductal Carcinoma In Situ Reveal Noncompetitive Growth Dynamics

Cancer Research(2025)10.1158/0008-5472.can-24-4415
N/A
0DataRank · unranked
0 citations

Matthew A. Greenwald, Daniel Monyak, Inmaculada C. Sorribes, Lorraine King, Allison Hall +13 more

Navigating the path to distant metastasis

Nature Genetics(2020)10.1038/s41588-020-0660-z
N/A
0DataRank · unranked
9 citations

Darryl Shibata, Trevor A. Graham

Aggressive Neuroblastomas Start Growing after Infancy

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.11.28.691194
N/A
0DataRank · unranked
0 citations

Shannon T. Holloway, Graham J. Gumbert, K.Anthony Kim, Allison Fong, Lars J. Grimm +4 more

Minimal barriers to invasion during human colorectal tumor growth

Nature Communications(2020)10.1038/s41467-020-14908-7
N/A
0DataRank · unranked
41 citations

Diego Mallo, Allison Hall, Timothy Hardman, Lorraine King, Sergei Tatishchev +6 more