Meghana Kshirsagar

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 9 papers. Top paper: “Democratizing protein language models with parameter-efficient fine-tuning”.

Democratizing protein language models with parameter-efficient fine-tuning

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2405840121

N/A

0.663DataRank · unranked

82 citations

Meghana Kshirsagar, Minkyung Baek, Rahul Dodhia, Juan Lavista Ferres, Bonnie Berger +1 more

Deep topic modeling of spatial transcriptomics in the rheumatoid arthritis synovium identifies distinct classes of ectopic lymphoid structures

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.08.631928

N/A

0.292DataRank · unranked

6 citations

Melanie H. Smith, Meghana Kshirsagar, Daniel C. Ramirez, Edward F. DiCarlo, Susan M. Goodman +4 more

Predicting locations of cryptic pockets from single protein structures using the PocketMiner graph neural network

Nature Communications(2023)10.1038/s41467-023-36699-3

N/A

0DataRank · unranked

181 citations

Michael D. Ward, Jonathan Borowsky, Meghana Kshirsagar, Jeffrey M. Lotthammer, Felipe Oviedo +3 more

Democratizing Protein Language Models with Parameter-Efficient Fine-Tuning

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.09.566187

N/A

0DataRank · unranked

15 citations

Meghana Kshirsagar, Minkyung Baek, Bonnie Berger, Rahul Dodhia, Juan Lavista Ferres +1 more

BindVAE: Dirichlet variational autoencoders for de novo motif discovery from accessible chromatin

Genome biology(2022)10.1186/s13059-022-02723-w

N/A

0DataRank · unranked

19 citations

Han Yuan, Juan Lavista Ferres, Christina S. Leslie, Meghana Kshirsagar

Self-Supervised Learning for Improved Optical Coherence Tomography Detection of Macular Telangiectasia Type 2

JAMA Ophthalmology(2024)10.1001/jamaophthalmol.2023.6454

N/A

0DataRank · unranked

12 citations

Lea Scheppke, Meghana Kshirsagar, Yue Wu, Rahul Dodhia, Roberto Bonelli +57 more

Rapid and accurate prediction of protein homo-oligomer symmetry with Seq2Symm

Research Square(2024)10.21203/rs.3.rs-4215086/v1

N/A

0DataRank · unranked

6 citations

Artur Meller, Ian R. Humphreys, Samuel Sledzieski, Yixi Xu, Rahul Dodhia +7 more

Enhanced Macular Telangiectasia Type 2 Detection: Leveraging Self-Supervised Learning and Ensemble Models

Ophthalmology Science(2025)10.1016/j.xops.2025.100710

N/A

0DataRank · unranked

3 citations

Lea Scheppke, Meghana Kshirsagar, Yue Wu, Rahul Dodhia, Roberto Bonelli +10 more

BindVAE: Dirichlet variational autoencoders for de novo motif discovery from accessible chromatin

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.23.461564

N/A

0DataRank · unranked

1 citations

Han Yuan, Juan Lavista Ferres, Christina S. Leslie, Meghana Kshirsagar