🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Kevin Rychel

University of California San Diego

ORCID: 0000-0002-4769-2804

Also affiliated with La Jolla Bioengineering Institute

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.2Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

iModulonDB 2.0: dynamic tools to facilitate knowledge-mining and user-enabled analyses of curated transcriptomic datasets

Nucleic Acids Research(2024)10.1093/nar/gkae1009
Top 31%
0.650DataRank
Top 31%30 citations

Jayanth Krishnan, Gaoyuan Li, Xuwen A Lou, Kevin Rychel, Yuan Yuan +9 more

Papers

Driven by 13 papers — median percentile 45. Top paper: “iModulonDB 2.0: dynamic tools to facilitate knowledge-mining and user-enabled analyses of curated transcriptomic datasets”.

iModulonDB 2.0: dynamic tools to facilitate knowledge-mining and user-enabled analyses of curated transcriptomic datasets

Nucleic Acids Research(2024)10.1093/nar/gkae1009
Top 31%
0.650DataRank
Top 31%30 citations

Jayanth Krishnan, Gaoyuan Li, Xuwen A Lou, Kevin Rychel, Yuan Yuan +9 more

The hallmarks of a tradeoff in transcriptomes that balances stress and growth functions

mSystems(2024)10.1128/msystems.00305-24
N/A
0.484DataRank · unranked
20 citations

Kevin Rychel, Richard Szubin, Ying Hefner, Arjun Patel, Daniel C. Zielinski +2 more

Independent component analysis reveals 49 independently modulated gene sets within the global transcriptional regulatory architecture of multidrug-resistant Acinetobacter baumannii

mSystems(2024)10.1128/msystems.00606-23
N/A
0.343DataRank · unranked
7 citations

Saugat Poudel, Anand V. Sastry, Kevin Rychel, Richard Szubin, Nicholas Dillon +7 more

High-resolution temporal profiling of E. coli transcriptional response

Nature Communications(2023)10.1038/s41467-023-43173-7
Top 55%
0.297DataRank
Top 55%6 citations

Kevin Rychel, Andrew Lezia, Anand V. Sastry, Bernhard Ø. Palsson, Jeff Hasty +1 more

Machine Learning of Pseudomonas aeruginosa transcriptomes identifies independently modulated sets of genes associated with known transcriptional regulators

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.28.454220
Top 56%
0.292DataRank
Top 56%4 citations

Hannah Tsunemoto, Anand V. Sastry, Richard Szubin, Kevin Rychel, Joseph Sugie +3 more

Laboratory evolution, transcriptomics, and modeling reveal mechanisms of paraquat tolerance

Cell Reports(2023)10.1016/j.celrep.2023.113105
N/A
0DataRank · unranked
24 citations

Justin Tan, Arjun Patel, Cameron Lamoureux, Ying Hefner, Richard Szubin +11 more

The hallmarks of a tradeoff in transcriptomes that balances stress and growth functions

Research Square(2023)10.21203/rs.3.rs-2729651/v1
N/A
0DataRank · unranked
9 citations

Kevin Rychel, Richard Szubin, Ying Hefner, Arjun Patel, Daniel C. Zielinski +2 more

Proteome allocation is linked to transcriptional regulation through a modularized transcriptome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.20.529291
N/A
0DataRank · unranked
4 citations

Dominic McGrosso, Ying Hefner, Anaamika Campeau, Anand V. Sastry, Svetlana Maurya +4 more

Advanced transcriptomic analysis reveals the role of efflux pumps and media composition in antibiotic responses of Pseudomonas aeruginosa

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.04.487074
N/A
0DataRank · unranked
0 citations

Hannah Tsunemoto, Anand V. Sastry, Richard Szubin, Kevin Rychel, Siddharth Chauhan +3 more

Advanced transcriptomic analysis reveals the role of efflux pumps and media composition in antibiotic responses of Pseudomonas aeruginosa

Nucleic Acids Research(2022)10.1093/nar/gkac743
N/A
0DataRank · unranked
36 citations

Hannah Tsunemoto, Anand V. Sastry, Richard Szubin, Kevin Rychel, Siddharth Chauhan +3 more

Proteome allocation is linked to transcriptional regulation through a modularized transcriptome

Nature Communications(2024)10.1038/s41467-024-49231-y
N/A
0DataRank · unranked
16 citations

Dominic McGrosso, Ying Hefner, Anaamika Campeau, Anand V. Sastry, Svetlana Maurya +4 more

A genome-scale metabolic model of a globally disseminated hyperinvasive M1 strain of Streptococcus pyogenes

mSystems(2024)10.1128/msystems.00736-24
N/A
0DataRank · unranked
11 citations

Daniel C. Zielinski, Saugat Poudel, Kevin Rychel, Jonathon L. Baker, Yoshihiro Toya +7 more

Machine learning fromPseudomonas aeruginosatranscriptomes identifies independently modulated sets of genes associated with known transcriptional regulators

Nucleic Acids Research(2022)10.1093/nar/gkac187
N/A
0DataRank · unranked
43 citations

Hannah Tsunemoto, Anand V. Sastry, Richard Szubin, Kevin Rychel, Joseph Sugie +3 more