Jeffrey D. Jensen

Biochemistry, Genetics and Molecular BiologyPsychology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

9.2Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A Draft Sequence of the Neandertal Genome

Science(2010)10.1126/science.1188021

Top 2%

8.6DataRank

Top 2%4581 citations

Johannes Krause, Adrian W. Briggs, Tomislav Maricic, Udo Stenzel, Martin Kircher +62 more

Papers

Driven by 55 papers — median percentile 50. Top paper: “A Draft Sequence of the Neandertal Genome”.

A Draft Sequence of the Neandertal Genome

Science(2010)10.1126/science.1188021

Top 2%

8.6DataRank

Top 2%4581 citations

Johannes Krause, Adrian W. Briggs, Tomislav Maricic, Udo Stenzel, Martin Kircher +62 more

The evolution of gene expression and binding specificity of the largest transcription factor family in primates

Evolution(2016)10.1111/evo.12819

N/A

0.666DataRank · unranked

17 citations

Lisha Mathew, Alex Wong, Didier Trono, Jeffrey D. Jensen, Adamandia Kapopoulou

A Pedigree-Based Map of Crossovers and Noncrossovers in Aye-Ayes ( Daubentonia madagascariensis )

Genome Biology and Evolution(2025)10.1093/gbe/evaf072

N/A

0.472DataRank · unranked

15 citations

Audald Lloret-Villas, Jeffrey D. Jensen, Susanne P. Pfeifer, Cyril J. Versoza

Inferring the Demographic History of Aye-Ayes ( Daubentonia madagascariensis ) from High-Quality, Whole-Genome, Population-Level Data

Genome Biology and Evolution(2024)10.1093/gbe/evae281

N/A

0.449DataRank · unranked

19 citations

Vivak Soni, Cyril J. Versoza, Susanne P. Pfeifer, Jeffrey D. Jensen, John W. Terbot

A whole-genome scan for evidence of positive and balancing selection in aye-ayes ( Daubentonia madagascariensis ) utilizing a well-fit evolutionary baseline model

G3 Genes Genomes Genetics(2025)10.1093/g3journal/jkaf078

N/A

0.396DataRank · unranked

13 citations

John W. Terbot, Cyril J. Versoza, Susanne P. Pfeifer, Jeffrey D. Jensen, Vivak Soni

Recent Insights Into the Evolutionary Genomics of the Critically Endangered Aye‐Aye ( Daubentonia madagascariensis )

American Journal of Primatology(2025)10.1002/ajp.70105

Top 50%

0.355DataRank

Top 50%8 citations

Susanne P. Pfeifer, Jeffrey D. Jensen, Vivak Soni

The Landscape of Structural Variation in Aye-Ayes (Daubentonia madagascariensis)

Genome Biology and Evolution(2025)10.1093/gbe/evaf167

N/A

0.241DataRank · unranked

4 citations

Jeffrey D. Jensen, Susanne P. Pfeifer, Cyril J. Versoza

Interpreting Patterns of X Chromosomal Relative to Autosomal Diversity in Aye‐Ayes ( Daubentonia madagascariensis )

American Journal of Primatology(2025)10.1002/ajp.70091

Top 62%

0.225DataRank

Top 62%3 citations

Vivak Soni, Cyril J. Versoza, Mark Milhaven, Adriana Calahorra‐Oliart, Devangana Shah +3 more

Revisiting the notion of deleterious sweeps

Genetics(2021)10.1093/genetics/iyab094

N/A

0DataRank · unranked

22 citations

Brian Charlesworth, Emma K Howell, Michael Lynch, Jeffrey D. Jensen, Parul Johri

Recommendations for improving statistical inference in population genomics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.27.466171

N/A

0DataRank · unranked

14 citations

Charles F. Aquadro, Mark Beaumont, Brian Charlesworth, Laurent Excoffier, Adam Eyre‐Walker +8 more

Recommendations for improving statistical inference in population genomics

PLoS Biology(2022)10.1371/journal.pbio.3001669

N/A

0DataRank · unranked

162 citations

Charles F. Aquadro, Mark Beaumont, Brian Charlesworth, Laurent Excoffier, Adam Eyre‐Walker +8 more

On the prospect of achieving accurate joint estimation of selection with population history

Genome Biology and Evolution(2022)10.1093/gbe/evac088

N/A

0DataRank · unranked

64 citations

Adam Eyre‐Walker, Ryan N. Gutenkunst, Kirk E. Lohmueller, Jeffrey D. Jensen, Parul Johri

How Can We Resolve Lewontin’s Paradox?

Genome Biology and Evolution(2022)10.1093/gbe/evac096

N/A

0DataRank · unranked

58 citations

Jeffrey D. Jensen, Brian Charlesworth

Soft selective sweeps: Addressing new definitions, evaluating competing models, and interpreting empirical outliers

PLoS Genetics(2022)10.1371/journal.pgen.1010022

N/A

0DataRank · unranked

28 citations

Wolfgang Stephan, Jeffrey D. Jensen, Parul Johri

Population Genetic Considerations Regarding Evidence for Biased Mutation Rates inArabidopsis thaliana

Molecular Biology and Evolution(2022)10.1093/molbev/msac275

N/A

0DataRank · unranked

18 citations

Jeffrey D. Jensen, Brian Charlesworth

Inferring the distribution of fitness effects in patient-sampled and experimental virus populations: two case studies

Heredity(2022)10.1038/s41437-021-00493-y

N/A

0DataRank · unranked

15 citations

Parul Johri, Jeffrey D. Jensen, Ana Yansi Morales-Arce

The impact of frequently neglected model violations on bacterial recombination rate estimation: a case study inMycobacterium canettiiandMycobacterium tuberculosis

G3 Genes Genomes Genetics(2022)10.1093/g3journal/jkac055

N/A

0DataRank · unranked

4 citations

Ana Yansi Morales-Arce, Susanne P. Pfeifer, Jeffrey D. Jensen, Susanna Sabin

Interpreting the pervasive observation of U-shaped Site Frequency Spectra

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.12.488084

N/A

0DataRank · unranked

6 citations

Élise Kerdoncuff, Sebastian Matuszewski, Marguerite Lapierre, Marcel Hildebrandt, Jeffrey D. Jensen +5 more

Developing an Evolutionary Baseline Model for Humans: Jointly Inferring Purifying Selection with Population History

Molecular Biology and Evolution(2023)10.1093/molbev/msad100

N/A

0DataRank · unranked

43 citations

Susanne P. Pfeifer, Jeffrey D. Jensen, Parul Johri

Evaluating power to detect recurrent selective sweeps under increasingly realistic evolutionary null models

Evolution(2023)10.1093/evolut/qpad120

N/A

0DataRank · unranked

35 citations

Parul Johri, Jeffrey D. Jensen, Vivak Soni

Novel Insights into the Landscape of Crossover and Noncrossover Events in Rhesus Macaques (Macaca mulatta)

Genome Biology and Evolution(2023)10.1093/gbe/evad223

N/A

0DataRank · unranked

26 citations

Sarah A. Weiss, Ravneet Johal, Bruno La Rosa, Jeffrey D. Jensen, Susanne P. Pfeifer +1 more

Developing an appropriate evolutionary baseline model for the study of SARS-CoV-2 patient samples

PLoS Pathogens(2023)10.1371/journal.ppat.1011265

N/A

0DataRank · unranked

25 citations

Parul Johri, Schuyler Liphardt, Vivak Soni, Susanne P. Pfeifer, Brandon S. Cooper +3 more

Interpreting the pervasive observation of U-shaped Site Frequency Spectra

PLoS Genetics(2023)10.1371/journal.pgen.1010677

N/A

0DataRank · unranked

24 citations

Élise Kerdoncuff, Sebastian Matuszewski, Marguerite Lapierre, Marcel Hildebrandt, Jeffrey D. Jensen +5 more

Developing an Appropriate Evolutionary Baseline Model for the Study of Human Cytomegalovirus

Genome Biology and Evolution(2023)10.1093/gbe/evad059

N/A

0DataRank · unranked

24 citations

John W. Terbot, Vivak Soni, Parul Johri, Jeffrey D. Jensen, Susanne P. Pfeifer +1 more

Population genetic concerns related to the interpretation of empirical outliers and the neglect of common evolutionary processes

Heredity(2023)10.1038/s41437-022-00575-5

N/A

0DataRank · unranked

19 citations

Jeffrey D. Jensen

A Simulation Framework for Modeling the Within-Patient Evolutionary Dynamics of SARS-CoV-2

Genome Biology and Evolution(2023)10.1093/gbe/evad204

N/A

0DataRank · unranked

13 citations

Brandon S. Cooper, Jeffrey M. Good, Jeffrey D. Jensen, John W. Terbot

Protective effect of pre-existing natural immunity in a nonhuman primate reinfection model of congenital cytomegalovirus infection

PLoS Pathogens(2023)10.1371/journal.ppat.1011646

N/A

0DataRank · unranked

11 citations

Shan Yu, Dollnovan Tran, Frances M. Saccoccio, Cyril J. Versoza, Daniel Malouli +13 more

Evaluating power to detect recurrent selective sweeps under increasingly realistic evolutionary null models

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.15.545166

N/A

0DataRank · unranked

2 citations

Parul Johri, Jeffrey D. Jensen, Vivak Soni

Protective effect of pre-existing natural immunity in a nonhuman primate reinfection model of congenital cytomegalovirus infection

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.10.536057

N/A

0DataRank · unranked

1 citations

Shan Yu, Dollnovan Tran, Frances M. Saccoccio, Cyril J. Versoza, Daniel Malouli +13 more

Developing an evolutionary baseline model for humans: jointly inferring purifying selection with population history

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.11.536488

N/A

0DataRank · unranked

1 citations

Susanne P. Pfeifer, Jeffrey D. Jensen, Parul Johri

The effects of mutation and recombination rate heterogeneity on the inference of demography and the distribution of fitness effects

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.11.566703

N/A

0DataRank · unranked

1 citations

Susanne P. Pfeifer, Jeffrey D. Jensen, Vivak Soni

A simulation framework for modeling the within-patient evolutionary dynamics of SARS-CoV-2

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.13.548462

N/A

0DataRank · unranked

0 citations

Brandon S. Cooper, Jeffrey M. Good, Jeffrey D. Jensen, John W. Terbot

Temporal challenges in detecting balancing selection from population genomic data

G3 Genes Genomes Genetics(2024)10.1093/g3journal/jkae069

N/A

0DataRank · unranked

33 citations

Jeffrey D. Jensen, Vivak Soni

Population genetic considerations regarding the interpretation of within-patient SARS-CoV-2 polymorphism data

Nature Communications(2024)10.1038/s41467-024-46261-4

N/A

0DataRank · unranked

7 citations

John W. Terbot, Jeffrey D. Jensen, Vivak Soni

The landscape of structural variation in aye-ayes ( Daubentonia madagascariensis )

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.08.622672

N/A

0DataRank · unranked

14 citations

Jeffrey D. Jensen, Susanne P. Pfeifer, Cyril J. Versoza

Inferring demographic and selective histories from population genomic data using a two-step approach in species with coding-sparse genomes: an application to human data

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.19.613979

N/A

0DataRank · unranked

11 citations

Jeffrey D. Jensen, Vivak Soni

Characterizing the rates and patterns of de novo germline mutations in the aye-aye ( Daubentonia madagascariensis )

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.08.622690

N/A

0DataRank · unranked

10 citations

Erin E. Ehmke, Jeffrey D. Jensen, Susanne P. Pfeifer, Cyril J. Versoza

A pedigree-based map of crossovers and non-crossovers in aye-ayes ( Daubentonia madagascariensis )

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.08.622675

N/A

0DataRank · unranked

9 citations

Audald Lloret-Villas, Jeffrey D. Jensen, Susanne P. Pfeifer, Cyril J. Versoza

Inferring the demographic history of aye-ayes ( Daubentonia madagascariensis ) from high-quality, whole-genome, population-level data

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.08.622659

N/A

0DataRank · unranked

9 citations

Vivak Soni, Cyril J. Versoza, Susanne P. Pfeifer, Jeffrey D. Jensen, John W. Terbot

Characterizing the Rates and Patterns of De Novo Germline Mutations in the Aye-Aye (Daubentonia madagascariensis)

Molecular Biology and Evolution(2025)10.1093/molbev/msaf034

N/A

0DataRank · unranked

18 citations

Erin E. Ehmke, Jeffrey D. Jensen, Susanne P. Pfeifer, Cyril J. Versoza

Inferring Fine‐Scale Mutation and Recombination Rate Maps in Aye‐Ayes ( Daubentonia madagascariensis )

Ecology and Evolution(2025)10.1002/ece3.72314

N/A

0DataRank · unranked

9 citations

Cyril J. Versoza, John W. Terbot, Jeffrey D. Jensen, Susanne P. Pfeifer, Vivak Soni

Re‐Evaluating the Demographic History of, and Inferring the Fine‐Scale Recombination Landscape For, Wild Chinese Rhesus Macaques ( Macaca mulatta )

American Journal of Primatology(2025)10.1002/ajp.70088

N/A

0DataRank · unranked

7 citations

Adriana Calahorra‐Oliart, Cyril J. Versoza, Devangana Shah, Vivak Soni, Susanne P. Pfeifer +2 more

Inferring demographic and selective histories from population genomic data using a 2-step approach in species with coding-sparse genomes: an application to human data

G3 Genes Genomes Genetics(2025)10.1093/g3journal/jkaf019

N/A

0DataRank · unranked

14 citations

Jeffrey D. Jensen, Vivak Soni

Accounting for Chimerism in Demographic Inference: Reconstructing the History of Common Marmosets ( Callithrix jacchus ) from High-Quality, Whole-Genome, Population-Level Data

Molecular Biology and Evolution(2025)10.1093/molbev/msaf119

N/A

0DataRank · unranked

10 citations

Cyril J. Versoza, Eric J. Vallender, Jeffrey D. Jensen, Susanne P. Pfeifer, Vivak Soni

Investigating the effects of chimerism on the inference of selection: quantifying genomic targets of purifying, positive, and balancing selection in common marmosets (Callithrix jacchus)

Heredity(2025)10.1038/s41437-025-00804-7

N/A

0DataRank · unranked

5 citations

Cyril J. Versoza, Susanne P. Pfeifer, Jeffrey D. Jensen, Vivak Soni

Inferring the landscapes of mutation and recombination in the common marmoset ( Callithrix jacchus ) in the presence of twinning and hematopoietic chimerism

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.01.662565

N/A

0DataRank · unranked

10 citations

Cyril J. Versoza, Jeffrey D. Jensen, Susanne P. Pfeifer, Vivak Soni

Investigating the effects of chimerism on the inference of selection: quantifying genomic targets of purifying, positive, and balancing selection in common marmosets ( Callithrix jacchus )

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.01.662532

N/A

0DataRank · unranked

1 citations

Cyril J. Versoza, Susanne P. Pfeifer, Jeffrey D. Jensen, Vivak Soni

The Effects of Mutation and Recombination Rate Heterogeneity on the Inference of Demography and the Distribution of Fitness Effects

Genome Biology and Evolution(2024)10.1093/gbe/evae004

N/A

0DataRank · unranked

30 citations

Susanne P. Pfeifer, Jeffrey D. Jensen, Vivak Soni

The population genomics of within-host Mycobacterium tuberculosis

Heredity(2020)10.1038/s41437-020-00377-7

N/A

0DataRank · unranked

17 citations

Susanna Sabin, Anne C. Stone, Jeffrey D. Jensen, Ana Yansi Morales-Arce

Imposed mutational meltdown as an antiviral strategy

Evolution(2020)10.1111/evo.14107

N/A

0DataRank · unranked

25 citations

Ryan A. Stikeleather, Timothy F. Kowalik, Michael Lynch, Jeffrey D. Jensen

Considering Genomic Scans for Selection as Coalescent Model Choice

Genome Biology and Evolution(2020)10.1093/gbe/evaa093

N/A

0DataRank · unranked

24 citations

Jeffrey D. Jensen, Rebecca B. Harris

The impact of purifying and background selection on the inference of population history: problems and prospects

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.28.066365

N/A

0DataRank · unranked

19 citations

Kellen Riall, Hannes Becher, Laurent Excoffier, Brian Charlesworth, Jeffrey D. Jensen +1 more

Revisiting the Notion of Deleterious Sweeps

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.16.385666

N/A

0DataRank · unranked

2 citations

Brian Charlesworth, Emma K Howell, Michael Lynch, Jeffrey D. Jensen, Parul Johri

Effects of Selection at Linked Sites on Patterns of Genetic Variability

Annual Review of Ecology Evolution and Systematics(2021)10.1146/annurev-ecolsys-010621-044528

N/A

0DataRank · unranked

167 citations

Jeffrey D. Jensen, Brian Charlesworth

The Impact of Purifying and Background Selection on the Inference of Population History: Problems and Prospects

Molecular Biology and Evolution(2021)10.1093/molbev/msab050

N/A

0DataRank · unranked

125 citations

Kellen Riall, Hannes Becher, Laurent Excoffier, Brian Charlesworth, Jeffrey D. Jensen +1 more

Jeffrey D. Jensen

Indexed papers

Top data-sharing exemplar

Papers