🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Matthew E. Berginski

Tempus Labs (United States)

ORCID: 0000-0002-4798-3273
Biochemistry, Genetics and Molecular BiologyComputer ScienceMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
4.0Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Dark Kinase Knowledgebase: an online compendium of knowledge and experimental results of understudied kinases

Nucleic Acids Research(2020)10.1093/nar/gkaa853
Top 6%
4.0DataRank
Top 6%159 citations

Nienke Moret, Changchang Liu, Dennis Goldfarb, Peter K. Sorger, Shawn M. Gomez +1 more

Papers

Driven by 18 papers — median percentile 94. Top paper: “The Dark Kinase Knowledgebase: an online compendium of knowledge and experimental results of understudied kinases”.

The Dark Kinase Knowledgebase: an online compendium of knowledge and experimental results of understudied kinases

Nucleic Acids Research(2020)10.1093/nar/gkaa853
Top 6%
4.0DataRank
Top 6%159 citations

Nienke Moret, Changchang Liu, Dennis Goldfarb, Peter K. Sorger, Shawn M. Gomez +1 more

Differential Performance of Machine Learning Models in Prediction of Procedure-Specific Outcomes

Journal of Gastrointestinal Surgery(2022)10.1007/s11605-022-05332-x
N/A
0.574DataRank · unranked
9 citations

Matthew E. Berginski, Chirag S. Desai, José G. Guillem, Jonathan M. Stem, Shawn M. Gomez +2 more

Kinome inhibition states and multiomics data enable prediction of cell viability in diverse cancer types

PLoS Computational Biology(2023)10.1371/journal.pcbi.1010888
N/A
0.312DataRank · unranked
7 citations

Chinmaya U. Joisa, Brian T. Golitz, Shawn M. Gomez, Matthew E. Berginski

Kinome Inhibition States and Multiomics Data Enable Prediction of Cell Viability in Diverse Cancer Types

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.08.487646
N/A
0.312DataRank · unranked
7 citations

Chinmaya U. Joisa, Brian T. Golitz, Shawn M. Gomez, Matthew E. Berginski

Gleevec, an Abl Family Inhibitor, Produces a Profound Change in Cell Shape and Migration

UNC Libraries(2020)10.17615/wkw8-4a17
N/A
0DataRank · unranked
0 citations

Xavier Trepat, George A. Truskey, Zaozao Chen, Kenneth A. Jacobson, Shawn M. Gomez +8 more

LKB1 loss in melanoma disrupts directional migration toward extracellular matrix cues

Carolina Digital Repository (University of North Carolina at Chapel Hill)(2020)10.17615/nr0g-cg74
N/A
0DataRank · unranked
0 citations

Evan S. Dubose, Tao Bo, Shawn M. Gomez, James E. Bear, Wenjin Liu +7 more

The Vinculin C-terminal Hairpin Mediates F-actin Bundle Formation, Focal Adhesion, and Cell Mechanical Properties

UNC Libraries(2020)10.17615/g6d2-yd67
N/A
0DataRank · unranked
2 citations

Sharon L. Campbell, Vinay Swaminathan, Kai Shen, Christophe Guilluy, Caitlin E. Tolbert +3 more

Kinome state is predictive of cell viability in pancreatic cancer tumor and cancer-associated fibroblast cell lines.

UNC Libraries(2025)10.17615/zk43-2w75
N/A
0DataRank · unranked
0 citations

Brian T. Golitz, Madison R. Jenner, Chinmaya U. Joisa, Naim Rashid, Jen Jen Yeh +6 more

Integrated Single-Dose Kinome Profiling Data is Predictive of Cancer Cell Line Sensitivity to Kinase Inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.06.519165
N/A
0DataRank · unranked
1 citations

Kevin A. Chen, Matthew E. Berginski, Brian T. Golitz, Madison R. Jenner, Silvia G. Herrera Loeza +3 more

Arp2/3 Is Critical for Lamellipodia and Response to Extracellular Matrix Cues but Is Dispensable for Chemotaxis

UNC Libraries(2020)10.17615/c2jn-w351
N/A
0DataRank · unranked
4 citations

Elizabeth M. Haynes, Shawn M. Gomez, Jack D. Griffith, Congying Wu, Sreeja B. Asokan +3 more

Integrated single-dose kinome profiling data is predictive of cancer cell line sensitivity to kinase inhibitors

PeerJ(2023)10.7717/peerj.16342
N/A
0DataRank · unranked
6 citations

Kevin A. Chen, Matthew E. Berginski, Brian T. Golitz, Madison R. Jenner, Gabriela Herrera Loeza +3 more

Combined kinome inhibition states are predictive of cancer cell line sensitivity to kinase inhibitor combination therapies

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.01.551346
N/A
0DataRank · unranked
1 citations

Kevin A. Chen, Samantha Beville, Timothy J. Stuhlmiller, Matthew E. Berginski, Denis O. Okumu +4 more

Kinome inhibition states and multiomics data enable prediction of cell viability in diverse cancer types

UNC Libraries(2023)10.17615/rb6p-sg79
N/A
0DataRank · unranked
0 citations

Brian T. Golitz, Shawn M. Gomez, Matthew E. Berginski, Chinmaya U. Joisa

Combined kinome inhibition states are predictive of cancer cell line sensitivity to kinase inhibitor combination therapies

PubMed(2023)10.1142/9789811286421_0022
N/A
0DataRank · unranked
0 citations

Kevin A. Chen, Samantha Beville, Timothy J. Stuhlmiller, Matthew E. Berginski, Denis O. Okumu +5 more

Kinome state is predictive of cell viability in pancreatic cancer tumor and cancer-associated fibroblast cell lines

PeerJ(2024)10.7717/peerj.17797
N/A
0DataRank · unranked
3 citations

Madison R. Jenner, Chinmaya U. Joisa, Gabriela Herrera Loeza, Brian T. Golitz, Matthew B. Lipner +6 more

Coral: Clear and Customizable Visualization of Human Kinome Data

UNC Libraries(2024)10.17615/q10j-ha05
N/A
0DataRank · unranked
0 citations

Jeff Hammerbacher, Erika Deoudes, Matthew E. Berginski, Shawn M. Gomez, Ivan Jimenez-Ruiz +3 more

Combined kinome inhibition states are predictive of cancer cell line sensitivity to kinase inhibitor combination therapies.

UNC Libraries(2025)10.17615/tg7c-sn11
N/A
0DataRank · unranked
0 citations

Shawn M. Gomez, Gary L. Johnson, Chinmaya U. Joisa, Kevin A. Chen, Samantha Beville +5 more

A resource for exploring the understudied human kinome for research and therapeutic opportunities

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.02.022277
N/A
0DataRank · unranked
26 citations

Changchang Liu, Benjamin M. Gyori, John A. Bachman, Albert Steppi, Clemens Hug +7 more