Matthew D. Daugherty

Also affiliated with University of California San Diego

Immunology and MicrobiologyBiochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 28 papers. Top paper: “Virology under the Microscope—a Call for Rational Discourse”.

Virology under the Microscope—a Call for Rational Discourse

mSphere(2023)10.1128/msphere.00034-23

N/A

0.360DataRank · unranked

10 citations

Anice C. Lowen, Seema S. Lakdawala, James C. Alwine, Arturo Casadevall, Michael J. Imperiale +95 more

Acquired stress resilience through bacteria‐to‐nematode interdomain horizontal gene transfer

The EMBO Journal(2023)10.15252/embj.2023114835

N/A

0.330DataRank · unranked

8 citations

Chinmay A. Kalluraya, Bingying Wang, Ting Xu, Xinya Huang, Shouhong Guang +3 more

Virology under the Microscope—a Call for Rational Discourse

mBio(2023)10.1128/mbio.00188-23

N/A

0.241DataRank · unranked

4 citations

Anice C. Lowen, Seema S. Lakdawala, James C. Alwine, Arturo Casadevall, Michael J. Imperiale +95 more

ADP‐ribosyltransferases, an update on function and nomenclature

FEBS Journal(2021)10.1111/febs.16142

N/A

0DataRank · unranked

330 citations

Ivan Ahel, Matthias Altmeyer, Alan Ashworth, Péter Bai, Paul Chang +42 more

Diverse viral proteases activate the NLRP1 inflammasome

eLife(2021)10.7554/elife.60609

N/A

0DataRank · unranked

164 citations

Christopher Beierschmitt, Andrew P. Ryan, Rimjhim Agarwal, Patrick S. Mitchell, Matthew D. Daugherty +1 more

Ribosome quality control activity potentiates vaccinia virus protein synthesis during infection

Journal of Cell Science(2021)10.1242/jcs.257188

N/A

0DataRank · unranked

35 citations

Andrew P. Ryan, Amitkumar Fulzele, Marilyn Leonard, Matthew D. Daugherty, Eric J. Bennett +1 more

Co-opted genes of algal origin protect C. elegans against cyanogenic toxins

Current Biology(2022)10.1016/j.cub.2022.09.041

N/A

0DataRank · unranked

23 citations

Taruna Pandey, Yong Long, Sofia E. Delgado-Rodriguez, Matthew D. Daugherty, Dengke K. Ma +1 more

Host specific sensing of coronaviruses and picornaviruses by the CARD8 inflammasome

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.21.508960

N/A

0DataRank · unranked

9 citations

Rimjhim Agarwal, Nandan S. Gokhale, Jessie Kulsuptrakul, Andrew P. Ryan, Lennice K. Castro +9 more

SARS-CoV-2 Uses Nonstructural Protein 16 to Evade Restriction by IFIT1 and IFIT3

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.26.509529

N/A

0DataRank · unranked

9 citations

Kumari G. Lokugamage, Michelle N. Vu, Bryan A. Johnson, Dionna Scharton, Jessica A. Plante +13 more

Co-opted Genes of Algal Origin Protect C. elegans against Cyanogenic Toxins

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.06.498920

N/A

0DataRank · unranked

0 citations

Taruna Pandey, Yong Long, Sofia E. Delgado-Rodriguez, Matthew D. Daugherty, Dengke K. Ma +1 more

SARS-CoV-2 Uses Nonstructural Protein 16 To Evade Restriction by IFIT1 and IFIT3

Journal of Virology(2023)10.1128/jvi.01532-22

N/A

0DataRank · unranked

46 citations

Kumari G. Lokugamage, Michelle N. Vu, Bryan A. Johnson, Dionna Scharton, Jessica A. Plante +13 more

Host-specific sensing of coronaviruses and picornaviruses by the CARD8 inflammasome

PLoS Biology(2023)10.1371/journal.pbio.3002144

N/A

0DataRank · unranked

45 citations

Rimjhim Agarwal, Nandan S. Gokhale, Jessie Kulsuptrakul, Andrew P. Ryan, Elizabeth J. Fay +11 more

Recurrent Loss of Macrodomain Activity in Host Immunity and Viral Proteins

Pathogens(2023)10.3390/pathogens12050674

N/A

0DataRank · unranked

25 citations

Andrew P. Ryan, Matthew D. Daugherty, Sofia E. Delgado-Rodriguez

Tripping the wire: sensing of viral protease activity by CARD8 and NLRP1 inflammasomes

Current Opinion in Immunology(2023)10.1016/j.coi.2023.102354

N/A

0DataRank · unranked

24 citations

Matthew D. Daugherty, Lennice K. Castro

Bacterial origin of a key innovation in the evolution of the vertebrate eye

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2214815120

N/A

0DataRank · unranked

15 citations

Alexander J. Weitzel, Brian V. Tsu, Matthew D. Daugherty, Chinmay A. Kalluraya

Structure of LRRK1 and mechanisms of autoinhibition and activation

Nature Structural & Molecular Biology(2023)10.1038/s41594-023-01109-1

N/A

0DataRank · unranked

13 citations

Andrea M. Dickey, Yu Xuan Lin, Robert G. Abrisch, Sebastian Mathea, Deep Chatterjee +6 more

Virology under the Microscope—a Call for Rational Discourse

Journal of Virology(2023)10.1128/jvi.00089-23

N/A

0DataRank · unranked

20 citations

Anice C. Lowen, Seema S. Lakdawala, James C. Alwine, Arturo Casadevall, Michael J. Imperiale +95 more

Reply to Redmond and McLysaght: Uncertainty in the origin of amphioxus IRBP homologs

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2310867120

N/A

0DataRank · unranked

0 citations

Alexander J. Weitzel, Brian V. Tsu, Matthew D. Daugherty, Chinmay A. Kalluraya

Acquired stress resilience through bacteria-to-nematode horizontal gene transfer

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.20.554039

N/A

0DataRank · unranked

0 citations

Chinmay A. Kalluraya, Bingying Wang, Ting Xu, Xinya Huang, Shouhong Guang +3 more

Unchecked growth: Pushing the limits on RNA virus genome size in the absence of known proofreading

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2414223121

N/A

0DataRank · unranked

1 citations

Matthew D. Daugherty, Dustin R. Glasner

Evolutionary and functional analyses reveal a role for the RHIM in tuning RIPK3 activity across vertebrates

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.09.593370

N/A

0DataRank · unranked

1 citations

Kolya Isterabadi, Charles M Rezanka, Jessica Le, Matthew D. Daugherty, Elizabeth J. Fay

Zinc-finger PARP proteins ADP-ribosylate alphaviral proteins and are required for interferon-γ–mediated antiviral immunity

Science Advances(2025)10.1126/sciadv.adm6812

N/A

0DataRank · unranked

16 citations

Sofia E. Delgado-Rodriguez, Matthew D. Daugherty, Andrew P. Ryan

The IFIT2–IFIT3 antiviral complex targets short 5’ untranslated regions on viral mRNAs for translation inhibition

Nature Microbiology(2025)10.1038/s41564-025-02138-w

N/A

0DataRank · unranked

8 citations

Candace Todd, B. Cook, Agustina D’Urso, Shivani Khosla, Elena Estrada +19 more

ER protein CLCC1 promotes nuclear envelope fusion in herpesviral and host processes

Nature Communications(2025)10.1038/s41467-025-65115-1

N/A

0DataRank · unranked

3 citations

Adrian W. Sperl, Lucas Polack, Isabel Mejia, Haley Dame, Tien Huynh +7 more

Diverse viral proteases activate the NLRP1 inflammasome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.16.343426

N/A

0DataRank · unranked

17 citations

Christopher Beierschmitt, Andrew P. Ryan, Rimjhim Agarwal, Patrick S. Mitchell, Matthew D. Daugherty +1 more

Short 5’ UTRs serve as a marker for viral mRNA translation inhibition by the IFIT2-IFIT3 antiviral complex

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.11.637299

N/A

0DataRank · unranked

1 citations

Candace Todd, B. Cook, Agustina D’Urso, Shivani Khosla, Elena Estrada +17 more

Ribosome quality control activity potentiates vaccinia virus protein synthesis during infection

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.12.380634

N/A

0DataRank · unranked

3 citations

Andrew P. Ryan, Amitkumar Fulzele, Marilyn Leonard, Matthew D. Daugherty, Eric J. Bennett +1 more

Cell cycle-gated feedback control mediates desensitization to interferon stimulation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.18.103101

N/A

0DataRank · unranked

0 citations

Yanfei Jiang, Kei‐ichiro Arimoto, Bingxian Xu, Adarsh Rajesh, Andy P Ryan +5 more