🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Diane Trout

California Institute of Technology

ORCID: 0000-0002-4928-5532
Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
25.9Author DataRank

Indexed papers

6in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 6 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A comparative encyclopedia of DNA elements in the mouse genome

Nature(2014)10.1038/nature13992
Top 2%
7.9DataRank
Top 2%1946 citations

Yong Cheng, Alessandra Breschi, Jost Vielmetter, Weisheng Wu, Tyrone Ryba +150 more

Papers

Driven by 12 papers — median percentile 95. Top paper: “A comparative encyclopedia of DNA elements in the mouse genome”.

A comparative encyclopedia of DNA elements in the mouse genome

Nature(2014)10.1038/nature13992
Top 2%
7.9DataRank
Top 2%1946 citations

Yong Cheng, Alessandra Breschi, Jost Vielmetter, Weisheng Wu, Tyrone Ryba +150 more

Expanded encyclopaedias of DNA elements in the human and mouse genomes

Nature(2020)10.1038/s41586-020-2493-4
Top 3%
6.4DataRank
Top 3%2615 citations

Federico Abascal, Reyes Acosta, Nicholas J. Addleman, Jessika Adrian, Veena Afzal +501 more

An atlas of dynamic chromatin landscapes in mouse fetal development

Nature(2020)10.1038/s41586-020-2093-3
Top 5%
4.8DataRank
Top 5%441 citations

Iros Barozzi, Yuan Zhao, Yanxiao Zhang, Hui Huang, Ah Young Lee +38 more

The changing mouse embryo transcriptome at whole tissue and single-cell resolution

Nature(2020)10.1038/s41586-020-2536-x
Top 5%
4.6DataRank
Top 5%202 citations

Brian A. Williams, Diane Trout, Georgi K. Marinov, Henry Amrhein, Libera Berghella +11 more

Spatiotemporal DNA methylome dynamics of the developing mouse fetus

Nature(2020)10.1038/s41586-020-2119-x
N/A
3.6DataRank · unranked
195 citations

Manoj Hariharan, David U. Gorkin, Diane E. Dickel, Chongyuan Luo, Rosa G. Castanon +15 more

The ENCODE Uniform Analysis Pipelines

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.04.535623
Top 11%
2.0DataRank
Top 11%102 citations

Jin-Wook Lee, Otto Jolanki, Meenakshi S. Kagda, Keenan Graham, Paul Sud +55 more

Landscape of transcription in human cells

Nature(2012)10.1038/nature11233
N/A
1.3DataRank · unranked
5354 citations

Qi Dai, Angelika Merkel, Timo Lassmann, Shinichi Morishita, Andrea Tanzer +91 more

Mapping and modeling the genomic basis of differential RNA isoform expression at single-cell resolution with LR-Split-seq

Genome biology(2021)10.1186/s13059-021-02505-w
N/A
0.626DataRank · unranked
64 citations

Fairlie Reese, Katherine Williams, Gabriela Balderrama-Gutierrez, Cassandra McGill, Diane Trout +5 more

The ENCODE Uniform Analysis Pipelines

Research Square(2023)10.21203/rs.3.rs-3111932/v1
N/A
0.553DataRank · unranked
39 citations

Jin-Wook Lee, Otto Jolanki, Meenakshi S. Kagda, Keenan Graham, Paul Sud +57 more

Mapping and modeling the genomic basis of differential RNA isoform expression at single-cell resolution with LR-Split-seq

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.26.441522
N/A
0.269DataRank · unranked
5 citations

Fairlie Reese, Katherine Williams, Gabriela Balderrama-Gutierrez, Cassandra McGill, Diane Trout +5 more

Systematic cell-type resolved transcriptomes of 8 tissues in 8 lab and wild-derived mouse strains capture global and local expression variation

Cell Genomics(2025)10.1016/j.xgen.2025.101108
Top 70%
0.165DataRank
Top 70%2 citations

Ryan Weber, Elnaz Abdollahzadeh, Nikhila Swarna, Delaney K. Sullivan, Diane Trout +21 more

Long-read sequencing transcriptome quantification with lr-kallisto

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.19.604364
N/A
0DataRank · unranked
14 citations

Delaney K. Sullivan, A. Sina Booeshaghi, Fairlie Reese, Elisabeth Rebboah, Jasmine Sakr +12 more