🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Xinxian Deng

University of Washington

ORCID: 0000-0002-5007-218X
Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.1Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Single-cell landscape of nuclear configuration and gene expression during stem cell differentiation and X inactivation

Genome biology(2021)10.1186/s13059-021-02432-w
Top 22%
0.925DataRank
Top 22%27 citations

Vijay Ramani, Ritambhara Singh, He Fang, Dana L. Jackson, Sanjay Srivatsan +9 more

Papers

Driven by 18 papers — median percentile 54. Top paper: “A single-cell time-lapse of mouse prenatal development from gastrula to birth”.

A single-cell time-lapse of mouse prenatal development from gastrula to birth

Nature(2024)10.1038/s41586-024-07069-w
N/A
3.2DataRank · unranked
181 citations

Beth Martin, Ian Welsh, Riza M. Daza, Truc-Mai Le, Xingfan Huang +20 more

Single-cell landscape of nuclear configuration and gene expression during stem cell differentiation and X inactivation

Genome biology(2021)10.1186/s13059-021-02432-w
Top 22%
0.925DataRank
Top 22%27 citations

Vijay Ramani, Ritambhara Singh, He Fang, Dana L. Jackson, Sanjay Srivatsan +9 more

A single-cell transcriptional timelapse of mouse embryonic development, from gastrula to pup

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.05.535726
N/A
0.470DataRank · unranked
22 citations

Beth Martin, Ian Welsh, Riza M. Daza, Truc-Mai Le, Xingfan Huang +20 more

Single-cell landscape of nuclear configuration and gene expression during stem cell differentiation and X inactivation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.20.390765
N/A
0.241DataRank · unranked
4 citations

Vijay Ramani, Ritambhara Singh, He Fang, Dana L. Jackson, Sanjay Srivatsan +9 more

Multicondition and multimodal temporal profile inference during mouse embryonic development

Genome Research(2025)10.1101/gr.279997.124
Top 70%
0.165DataRank
Top 70%2 citations

Chengxiang Qiu, Galina N. Filippova, Gang Li, Jay Shendure, Jean‐Philippe Vert +4 more

Phenotypes and Genotypes in Patients with SMC1A-Related Developmental and Epileptic Encephalopathy

Genes(2023)10.3390/genes14040852
N/A
0DataRank · unranked
17 citations

Jonathan Lopez, He Fang, Jacqueline Lee‐Eng, Zhijun Duan, Xinxian Deng +1 more

Trans- and cis-acting effects of Firre on epigenetic features of the inactive X chromosome

Nature Communications(2020)10.1038/s41467-020-19879-3
N/A
0DataRank · unranked
64 citations

Giancarlo Bonora, Jordan P. Lewandowski, Jitendra Thakur, Galina N. Filippova, Steven Henikoff +7 more

KDM6A facilitates Xist upregulation at the onset of X inactivation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.16.553617
N/A
0DataRank · unranked
2 citations

Jin-Li Zhang, Ma Li, He Fang, Rui Ma, Camille Groneck +6 more

Pseudotime analysis for time-series single-cell sequencing and imaging data

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.03.565575
N/A
0DataRank · unranked
0 citations

Hyeonjin Kim, Sriram Pendyala, Ran Zhang, Christine M. Distèche, Jean‐Philippe Vert +4 more

Multiomic characterization of RNA microenvironments by oligonucleotide-mediated proximity-interactome mapping

Nature Methods(2024)10.1038/s41592-024-02457-6
N/A
0DataRank · unranked
38 citations

Evan E. Kania, Diana Q. Lei, Rose Fields, Christopher D. McGann, Daphnée M. Marciniak +10 more

KDM6A facilitates Xist upregulation at the onset of X inactivation

Biology of Sex Differences(2025)10.1186/s13293-024-00683-3
N/A
0DataRank · unranked
9 citations

Jin-Li Zhang, Li Ma, He Fang, Rui Ma, Camille Groneck +8 more

CTCF-mediated insulation and chromatin environment modulate Car5b escape from X inactivation

BMC Biology(2025)10.1186/s12915-025-02137-7
N/A
0DataRank · unranked
4 citations

Ana R. Tronco, Giancarlo Bonora, Truong N. Nguyen, Jitendra Thakur, Joel B. Berletch +8 more

Sceptic: pseudotime analysis for time-series single-cell sequencing and imaging data

Genome biology(2025)10.1186/s13059-025-03679-3
N/A
0DataRank · unranked
5 citations

Hyeonjin Kim, Sriram Pendyala, Ran Zhang, Jean‐Philippe Vert, Christine M. Distèche +4 more

CTCF-mediated insulation and chromatin environment modulate Car5b escape from X inactivation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.04.539469
N/A
0DataRank · unranked
6 citations

Ana R. Tronco, Giancarlo Bonora, Truong N. Nguyen, Jitendra Thakur, Joel B. Berletch +7 more

Deletion of FUNDC2 and CMC4 on Chromosome Xq28 Is Sufficient to Cause Hypergonadotropic Hypogonadism in Men

Frontiers in Genetics(2020)10.3389/fgene.2020.557341
N/A
0DataRank · unranked
13 citations

He Fang, Asha Pathak, Angela M. Zou, Whitney Neufeld‐Kaiser, Emily A. Malouf +4 more

Evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster

UNC Libraries(2020)10.17615/50g2-jv23
N/A
0DataRank · unranked
12 citations

Carrie Davis, David Sturgill, Di Kim Nguyen, LaDeana Hillier, Joseph B. Hiatt +10 more

Deletion of FUNDC2 and CMC4 on chromosome Xq28 is sufficient to cause hypergonadotropic hypogonadism in men

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.23.004424
N/A
0DataRank · unranked
0 citations

He Fang, Asha Pathak, Angela M. Zou, Whitney Neufeld‐Kaiser, Emily A. Malouf +4 more

X-factors in human disease: impact of gene content and dosage regulation

Human Molecular Genetics(2021)10.1093/hmg/ddab221
N/A
0DataRank · unranked
28 citations

Xinxian Deng, Christine M. Distèche, He Fang