Anthony Gitter

Also affiliated with Morgridge Institute for Research

Biochemistry, Genetics and Molecular BiologyComputer ScienceMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile

0.109Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Assay2Mol: Large Language Model-based Drug Design Using BioAssay Context

PubMed(2025)10.18653/v1/2025.emnlp-main.1390

Top 72%

0.109DataRank

Top 72%1 citations

Spencer S. Ericksen, Anthony Gitter, Yifan Deng

Papers

Driven by 36 papers — median percentile 28. Top paper: “Opportunities and obstacles for deep learning in biology and medicine”.

Opportunities and obstacles for deep learning in biology and medicine

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/142760

N/A

11.2DataRank · unranked

310 citations

Daniel S. Himmelstein, Brett K. Beaulieu‐Jones, Alexandr A. Kalinin, Brian T. Do, Gregory P. Way +31 more

Neural networks to learn protein sequence–function relationships from deep mutational scanning data

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2104878118

N/A

4.5DataRank · unranked

180 citations

Sarah A. Fahlberg, Pete Heinzelman, Philip A. Romero, Anthony Gitter, Sam Gelman

Open collaborative writing with Manubot

PLOS Computational Biology(2019)10.1371/journal.pcbi.1007128

N/A

4.2DataRank · unranked

83 citations

Vincent Rubinetti, David R. Slochower, Dongbo Hu, Venkat S. Malladi, Casey S. Greene +2 more

Current and future directions in network biology

Bioinformatics Advances(2024)10.1093/bioadv/vbae099

N/A

1.6DataRank · unranked

100 citations

Michelle M. Li, Aydin Wells, Kimberly Glass, Deisy Morselli Gysi, Krishnan, Arjun +32 more

Opportunities and obstacles for deep learning in biology and medicine

Journal of The Royal Society Interface(2018)10.1098/rsif.2017.0387

N/A

1.2DataRank · unranked

2203 citations

Daniel S. Himmelstein, Brett K. Beaulieu‐Jones, Alexandr A. Kalinin, Brian T. Do, Gregory P. Way +31 more

Application of Traditional Vaccine Development Strategies to SARS-CoV-2

mSystems(2023)10.1128/msystems.00927-22

N/A

0.718DataRank · unranked

22 citations

Alexandra J. Lee, Elizabeth Sell, Likhitha Kolla, Anthony Gitter, Casey S. Greene +32 more

The Coming of Age of Nucleic Acid Vaccines during COVID-19

mSystems(2023)10.1128/msystems.00928-22

N/A

0.709DataRank · unranked

22 citations

Ronan Lordan, Likhitha Kolla, Elizabeth Sell, Alexandra J. Lee, Nils Wellhausen +46 more

Biophysics-based protein language models for protein engineering

Nature Methods(2025)10.1038/s41592-025-02776-2

N/A

0.682DataRank · unranked

36 citations

Bryce Johnson, Chase R. Freschlin, Arnav Sharma, Sameer D’Costa, John Peters +3 more

Lag penalized weighted correlation for time series clustering

BMC Bioinformatics(2020)10.1186/s12859-019-3324-1

N/A

0.648DataRank · unranked

15 citations

Anthony Gitter, Thevaa Chandereng

Ten quick tips for deep learning in biology

PLOS Computational Biology(2022)10.1371/journal.pcbi.1009803

N/A

0.550DataRank · unranked

38 citations

Anthony Gitter, Casey S. Greene, Sebastian Raschka, Finlay Maguire, Alexander J. Titus +16 more

Alternative splicing liberates a cryptic cytoplasmic isoform of mitochondrial MECR that antagonizes influenza virus

PLoS Biology(2022)10.1371/journal.pbio.3001934

N/A

0.534DataRank · unranked

17 citations

Hélène Meistermann, Manuel Tzouros, Aaron Baker, Sabrina Golling, Juliane Siebourg Polster +6 more

Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure

mSystems(2021)10.1128/msystems.00095-21

N/A

0.489DataRank · unranked

25 citations

Adam L. MacLean, Alexandra J. Lee, Bharath Ramsundar, Vikas Bansal, Michael P. Robson +24 more

Inferring signaling pathways with probabilistic programming

Bioinformatics(2020)10.1093/bioinformatics/btaa861

N/A

0.400DataRank · unranked

6 citations

Anthony Gitter, David Merrell

An approachable, flexible and practical machine learning workshop for biologists

Bioinformatics(2022)10.1093/bioinformatics/btac233

N/A

0.344DataRank · unranked

5 citations

Fangzhou Mu, Rosemary S. Russ, Milica Cvetkovic, Debora Treu, Anthony Gitter +1 more

Chemical Language Model Linker: Blending Text and Molecules with Modular Adapters

Journal of Chemical Information and Modeling(2025)10.1021/acs.jcim.5c00853

N/A

0.325DataRank · unranked

6 citations

Spencer S. Ericksen, Anthony Gitter, Yifan Deng

Correction for Rando et al., “Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure”

mSystems(2022)10.1128/msystems.01447-21

N/A

0.241DataRank · unranked

4 citations

Adam L. MacLean, Alexandra J. Lee, Bharath Ramsundar, Vikas Bansal, Michael P. Robson +23 more

Evaluating scalable supervised learning for synthesize-on-demand chemical libraries

INDIGO (University of Illinois at Chicago)(2021)10.33774/chemrxiv-2021-fg8z9

N/A

0.129DataRank · unranked

1 citations

Shengchao Liu, Spencer S. Ericksen, Gene E. Ananiev, Andrew F. Voter, Song Guo +5 more

Alternative splicing liberates a cryptic cytoplasmic isoform of mitochondrial MECR that antagonizes influenza virus

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.09.355982

N/A

0.121DataRank · unranked

1 citations

Hélène Meistermann, Manuel Tzouros, Aaron Baker, Sabrina Golling, Juliane Siebourg Polster +6 more

Assay2Mol: Large Language Model-based Drug Design Using BioAssay Context

PubMed(2025)10.18653/v1/2025.emnlp-main.1390

Top 72%

0.109DataRank

Top 72%1 citations

Spencer S. Ericksen, Anthony Gitter, Yifan Deng

An Open-Publishing Response to the COVID-19 Infodemic

PubMed(2021)10.48550/arxiv.2109.08633

N/A

0.104DataRank · unranked

1 citations

Simina M. Boca, Lucy D’Agostino McGowan, Daniel S. Himmelstein, Michael P. Robson, Vincent Rubinetti +5 more

Evaluating scalable supervised learning for synthesize-on-demand chemical libraries

ChemRxiv(2023)10.26434/chemrxiv-2021-fg8z9-v3

N/A

0.104DataRank · unranked

1 citations

Shengchao Liu, Spencer S. Ericksen, Gene E. Ananiev, Andrew F. Voter, Song Guo +5 more

Molecular and Serologic Diagnostic Technologies for SARS-CoV-2

arXiv (Cornell University)(2022)10.48550/arxiv.2204.12598

N/A

0.104DataRank · unranked

1 citations

Christian Brueffer, Bharath Ramsundar, Anna Ada Dattoli, David Manheim, Jesse G. Meyer +8 more

Graph algorithms for predicting subcellular localization at the pathway level

PubMed(2022)10.1142/9789811270611_0014

N/A

0DataRank · unranked

4 citations

Anthony Gitter, Chris S. Magnano

An approachable, flexible, and practical machine learning workshop for biologists

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.03.479008

N/A

0DataRank · unranked

2 citations

Fangzhou Mu, Rosemary S. Russ, Milica Cvetkovic, Debora Treu, Anthony Gitter +1 more

HaihuaWang-hub/2020-workflows-paper: 2020 workflow paper

Zenodo (CERN European Organization for Nuclear Research)(2026)10.5281/zenodo.18308991

N/A

0DataRank · unranked

0 citations

Tessa Pierce Ward, Taylor Reiter, Anthony Gitter, Shannon Ek Joslin, Casey S. Greene +21 more

Automating parameter selection to avoid implausible biological pathway models

npj Systems Biology and Applications(2021)10.1038/s41540-020-00167-1

N/A

0DataRank · unranked

14 citations

Anthony Gitter, Chris S. Magnano

HIV-1 virological synapse formation enhances infection spread by dysregulating Aurora Kinase B

PLoS Pathogens(2023)10.1371/journal.ppat.1011492

N/A

0DataRank · unranked

10 citations

Eunju Park, Chris S. Magnano, Mark Horswill, Alicia Richards, Gregory K. Potts +7 more

Current and future directions in network biology

arXiv (Cornell University)(2023)10.48550/arxiv.2309.08478

N/A

0DataRank · unranked

3 citations

Michelle M. Li, Aydin Wells, Kimberly Glass, Deisy Morselli Gysi, Krishnan, Arjun +32 more

Evaluating scalable supervised learning for synthesize-on-demand chemical libraries

ChemRxiv(2023)10.26434/chemrxiv-2021-fg8z9-v2

N/A

0DataRank · unranked

0 citations

Shengchao Liu, Spencer S. Ericksen, Gene E. Ananiev, Andrew F. Voter, Song Guo +5 more

Biophysics-based protein language models for protein engineering

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.15.585128

N/A

0DataRank · unranked

29 citations

Bryce Johnson, Chase R. Freschlin, Arnav Sharma, Sameer D’Costa, John Peters +3 more

The Coming of Age of Nucleic Acid Vaccines during COVID-19

arXiv (Cornell University)(2022)10.48550/arxiv.2210.07247

N/A

0DataRank · unranked

0 citations

Bharath Ramsundar, Likhitha Kolla, Elizabeth Sell, Alexandra J. Lee, Nafisa M. Jadavji +6 more

Evaluating Scalable Supervised Learning for Synthesize-on-Demand Chemical Libraries

Journal of Chemical Information and Modeling(2023)10.1021/acs.jcim.3c00912

N/A

0DataRank · unranked

17 citations

Shengchao Liu, Spencer S. Ericksen, Gene E. Ananiev, Andrew F. Voter, Song Guo +5 more

Identification and Development of Therapeutics for COVID-19

mSystems(2021)10.1128/msystems.00233-21

N/A

0DataRank · unranked

18 citations

Nils Wellhausen, Soumita Ghosh, Alexandra J. Lee, Anna Ada Dattoli, Fengling Hu +18 more

Evaluating scalable supervised learning for synthesize-on-demand chemical libraries

ChemRxiv(2021)10.26434/chemrxiv-2021-fg8z9

N/A

0DataRank · unranked

0 citations

Shengchao Liu, Spencer S. Ericksen, Gene E. Ananiev, Andrew F. Voter, Song Guo +5 more

Neural networks to learn protein sequence-function relationships from deep mutational scanning data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.25.353946

N/A

0DataRank · unranked

17 citations

Sarah A. Fahlberg, Pete Heinzelman, Philip A. Romero, Anthony Gitter, Sam Gelman

Bayes Optimal Informer Sets for Early-Stage Drug Discovery

Biometrics(2022)10.1111/biom.13637

N/A

0DataRank · unranked

2 citations

Spencer S. Ericksen, Anthony Gitter, Michael A. Newton, Peng Yu

Anthony Gitter

Indexed papers

Top data-sharing exemplar

Papers