🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Pasha Apontes

Allen Institute for Brain Science

ORCID: 0000-0002-5356-7487

Also affiliated with James J. Peters VA Medical Center, Mental Illness Research, Education and Clinical Centers, Icahn School of Medicine at Mount Sinai

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
1.9Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The three-dimensional landscape of cortical chromatin accessibility in Alzheimer’s disease

Nature Neuroscience(2022)10.1038/s41593-022-01166-7
Top 17%
1.2DataRank
Top 17%65 citations

Mads E. Hauberg, Kiran Girdhar, Eunju Im, James M. Vicari, Samir Rahman +17 more

Papers

Driven by 10 papers — median percentile 78. Top paper: “The three-dimensional landscape of cortical chromatin accessibility in Alzheimer’s disease”.

The three-dimensional landscape of cortical chromatin accessibility in Alzheimer’s disease

Nature Neuroscience(2022)10.1038/s41593-022-01166-7
Top 17%
1.2DataRank
Top 17%65 citations

Mads E. Hauberg, Kiran Girdhar, Eunju Im, James M. Vicari, Samir Rahman +17 more

Population-level variation in enhancer expression identifies disease mechanisms in the human brain

Nature Genetics(2022)10.1038/s41588-022-01170-4
N/A
1.1DataRank · unranked
53 citations

Gabriel E. Hoffman, Pasha Apontes, Jaroslav Bendl, Samir Rahman, Michael B. Fernando +48 more

Lineage specific 3D genome structure in the adult human brain and neurodevelopmental changes in the chromatin interactome

Nucleic Acids Research(2023)10.1093/nar/gkad798
Top 27%
0.756DataRank
Top 27%28 citations

Pengfei Dong, Pasha Apontes, Michael B. Fernando, Roman Kosoy, Kayla G. Townsley +10 more

The three-dimensional landscape of chromatin accessibility in Alzheimer’s disease

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.11.426303
N/A
0DataRank · unranked
13 citations

Mads E. Hauberg, Kiran Girdhar, Eunju Im, James M. Vicari, Samir Rahman +14 more

From compartments to gene loops: Functions of the 3D genome in the human brain

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.12.464094
N/A
0DataRank · unranked
6 citations

Pengfei Dong, Pasha Apontes, Michael B. Fernando, Kayla G. Townsley, Kiran Girdhar +9 more

Evolution of regulatory signatures in primate cortical neurons at cell-type resolution

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2011884117
N/A
0DataRank · unranked
32 citations

Marit W. Vermunt, Pasha Apontes, Junhao Li, Ke Hao, Chet C. Sherwood +8 more

From compartments to gene loops: Functions of the 3D genome in the human brain

Research Square(2021)10.21203/rs.3.rs-964634/v1
N/A
0DataRank · unranked
0 citations

Samir Rahman, Pengfei Dong, Pasha Apontes, Michael B. Fernando, Kayla G. Townsley +9 more

Population-level variation of enhancer expression identifies novel disease mechanisms in the human brain

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.14.443421
N/A
0DataRank · unranked
5 citations

Gabriel E. Hoffman, Pasha Apontes, Jaroslav Bendl, Samir Rahman, Michael B. Fernando +12 more

Evolution of regulatory signatures in primate cortical neurons at cell type resolution

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.24.219881
N/A
0DataRank · unranked
4 citations

Marit W. Vermunt, Pasha Apontes, Junhao Li, Ke Hao, Chet C. Sherwood +8 more

Transcriptional and epigenetic characterization of early striosomes identifies Foxf2 and Olig2 as factors required for development of striatal compartmentation and neuronal phenotypic differentiation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.19.105171
N/A
0DataRank · unranked
3 citations

Sicheng Song, Kizito‐Tshitoko Tshilenge, Chuhyon Corwin, Justyna Mleczko, Carlos Galicia Aguirre +13 more