Chittibabu Guda

Also affiliated with University of Nebraska Medical Center

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A compiled dataset of molecular pathways associated with fusion genes identified in pediatric cancers

Data in Brief(2021)10.1016/j.dib.2021.106780

Top 100%

0DataRank

Top 100%0 citations

Chittibabu Guda, Neetha Nanoth Vellichirammal

Papers

Driven by 53 papers — median percentile 0. Top paper: “CE-MC: a multiple protein structure alignment server”.

CE-MC: a multiple protein structure alignment server

Nucleic Acids Research(2004)10.1093/nar/gkh464

N/A

6.6DataRank · unranked

114 citations

S. Lu, Chittibabu Guda, Shan Lu, Eric D. Scheeff, Philip E. Bourne +1 more

A NEW ALGORITHM FOR THE ALIGNMENT OF MULTIPLE PROTEIN STRUCTURES USING MONTE CARLO OPTIMIZATION

Biocomputing 2001(2000)10.1142/9789814447362_0028

N/A

4.5DataRank · unranked

57 citations

Chittibabu Guda, Eric D. Scheeff, Philip E. Bourne, Ilya N. Shindyalov

Gut Microbiota and Metabolic Specificity in Ulcerative Colitis and Crohn's Disease

Frontiers in Medicine(2020)10.3389/fmed.2020.606298

N/A

3.4DataRank · unranked

126 citations

Rizwan Ahmad, Nagavardhini Avuthu, Amar B. Singh, Chittibabu Guda, Jagadesan Sankarasubramanian

Conserved motifs in voltage-sensing and pore-forming modules of voltage-gated ion channel proteins

Biochemical and Biophysical Research Communications(2007)10.1016/j.bbrc.2006.10.190

N/A

1.0DataRank · unranked

14 citations

Philip E. Bourne, Chittibabu Guda, Purnima Guda

KSR1- and ERK-dependent translational regulation of the epithelial-to-mesenchymal transition

eLife(2021)10.7554/elife.66608

N/A

0.902DataRank · unranked

22 citations

Danielle E. Frodyma, Siddesh Southekal, Robert A. Svoboda, Adrian R. Black, Chittibabu Guda +6 more

The single-cell opioid responses in the context of HIV (SCORCH) consortium

Molecular Psychiatry(2024)10.1038/s41380-024-02620-7

N/A

0.526DataRank · unranked

16 citations

Rianne R. Campbell, Mary Kay Lobo, Joseph P. Receveur, Kriti Agrawal, Alejandra Borjabad +81 more

A signature of Prevotella copri and Faecalibacterium prausnitzii depletion, and a link with bacterial glutamate degradation in the Kenyan colorectal cancer patients

Journal of Gastrointestinal Oncology(2022)10.21037/jgo-22-116

N/A

0.515DataRank · unranked

30 citations

Amr Elkholy, Nagavardhini Avuthu, Michael Behring, Prachi Bajpai, Sumit Agarwal +15 more

Repeated Social Defeat Stress Induces an Inflammatory Gut Milieu by Altering the Mucosal Barrier Integrity and Gut Microbiota Homeostasis

Biological Psychiatry Global Open Science(2023)10.1016/j.bpsgos.2023.03.005

N/A

0.494DataRank · unranked

26 citations

Rizwan Ahmad, Cassandra M. Moshfegh, Jagadesan Sankarasubramanian, Vineet Joshi, Safwan Elkhatib +7 more

Role of Small Intestine and Gut Microbiome in Plant-Based Oral Tolerance for Hemophilia

Frontiers in Immunology(2020)10.3389/fimmu.2020.00844

N/A

0.489DataRank · unranked

25 citations

Xiaomei Wang, Nagavardhini Avuthu, Thaís B. Bertolini, Cox Terhorst, Chittibabu Guda +3 more

Quantitative Proteomics Identifies Novel Nrf2-Mediated Adaptative Signaling Pathways in Skeletal Muscle Following Exercise Training

Antioxidants(2023)10.3390/antiox12010151

N/A

0.396DataRank · unranked

13 citations

Abu Rafay, Jagadesan Sankarasubramanian, Neetha Nanoth Vellichirammal, Ved Vasishtha Pendyala, Li‐Rong Yu +6 more

Aconitate decarboxylase 1 mediates the acute airway inflammatory response to environmental exposures

Frontiers in Immunology(2024)10.3389/fimmu.2024.1432334

N/A

0.373DataRank · unranked

11 citations

Amy Nelson, Angela Gleason, Oliver Schanze, Todd A. Wyatt, Dhananjay Shinde +8 more

Ecdysoneless Overexpression Drives Mammary Tumorigenesis through Upregulation of C-MYC and Glucose Metabolism

Molecular Cancer Research(2022)10.1158/1541-7786.mcr-22-0122

N/A

0.360DataRank · unranked

10 citations

Sameer Mirza, Aditya Bele, Channabasavaiah B. Gurumurthy, Mohsin Ali Raza, Irfana Saleem +16 more

Pan-Cancer Analysis of Human Kinome Gene Expression and Promoter DNA Methylation Identifies Dark Kinase Biomarkers in Multiple Cancers

Cancers(2021)10.3390/cancers13061189

N/A

0DataRank · unranked

29 citations

Nitish K. Mishra, Chittibabu Guda, Siddesh Southekal

Hypo-glycosylated hFSH drives ovarian follicular development more efficiently than fully-glycosylated hFSH: enhanced transcription and PI3K and MAPK signaling

Human Reproduction(2021)10.1093/humrep/deab135

N/A

0DataRank · unranked

26 citations

Jitu W. George, Kendra L Clark, Kim Jonas, Gillian P. Johnson, Siddesh Southekal +11 more

A Holistic Systems Approach to Characterize the Impact of Pre- and Post-natal Oxycodone Exposure on Neurodevelopment and Behavior

Frontiers in Cell and Developmental Biology(2021)10.3389/fcell.2020.619199

N/A

0DataRank · unranked

20 citations

Victoria L. Schaal, Alexander R. Clark, Sneh Koul, Jagadesan Sankarasubramanian, Zhiqiu Xia +11 more

Integrative network analyses of transcriptomics data reveal potential drug targets for acute radiation syndrome

Scientific Reports(2021)10.1038/s41598-021-85044-5

N/A

0DataRank · unranked

8 citations

Bhanwar Lal Puniya, Robert Powers, Chittibabu Guda, Kenneth W. Bayles, David B. Berkowitz +2 more

A systems omics-based approach to decode substance use disorders and neuroadaptations

Neuroscience & Biobehavioral Reviews(2021)10.1016/j.neubiorev.2021.08.016

N/A

0DataRank · unranked

6 citations

Gurudutt Pendyala, Chittibabu Guda, Avinash M. Veerappa

A compiled dataset of molecular pathways associated with fusion genes identified in pediatric cancers

Data in Brief(2021)10.1016/j.dib.2021.106780

Top 100%

0DataRank

Top 100%0 citations

Chittibabu Guda, Neetha Nanoth Vellichirammal

FGDB: Database of follicle stimulating hormone glycans

Computational and Structural Biotechnology Journal(2021)10.1016/j.csbj.2021.03.009

Top 100%

0DataRank

Top 100%0 citations

Sanjit Pandey, David J. Harvey, George R. Bousfield, Chittibabu Guda, Sushil Kumar Shakyawar

Lung transcriptome of nonhuman primates exposed to total- and partial-body irradiation

Molecular Therapy — Nucleic Acids(2022)10.1016/j.omtn.2022.08.006

N/A

0DataRank · unranked

32 citations

Sahil Sethi, Sanjit Pandey, Jatinder Singh, Stephen Y. Wise, Alana D. Carpenter +4 more

Morphine suppresses peripheral responses and transforms brain myeloid gene expression to favor neuropathogenesis in SIV infection

Frontiers in Immunology(2022)10.3389/fimmu.2022.1012884

N/A

0DataRank · unranked

20 citations

Meng Niu, Brenda Morsey, Benjamin G. Lamberty, Katy Emanuel, Palsamy Periyasamy +10 more

Cardiac Spinal Afferent Denervation Attenuates Renal Dysfunction in Rats With Cardiorenal Syndrome Type 2

JACC Basic to Translational Science(2022)10.1016/j.jacbts.2022.02.008

N/A

0DataRank · unranked

15 citations

Neetha Nanoth Vellichirammal, Han Li, Lie Gao, Erika I. Boesen, Alicia M. Schiller +6 more

mintRULS: Prediction of miRNA–mRNA Target Site Interactions Using Regularized Least Square Method

Genes(2022)10.3390/genes13091528

N/A

0DataRank · unranked

9 citations

Siddesh Southekal, Chittibabu Guda, Sushil Kumar Shakyawar

NBBt-test: a versatile method for differential analysis of multiple types of RNA-seq data

Scientific Reports(2022)10.1038/s41598-022-15762-x

N/A

0DataRank · unranked

2 citations

Chittibabu Guda, Yuan-De Tan

Morphine Suppresses Peripheral Responses and Transforms Brain Myeloid Gene Expression to Favor Neuropathogenesis in SIV Infection

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.25.501436

N/A

0DataRank · unranked

0 citations

Meng Niu, Brenda Morsey, Benjamin G. Lamberty, Katy Emanuel, Palsamy Periyasamy +10 more

Critical contributions of protein cargos to the functions of macrophage-derived extracellular vesicles

Journal of Nanobiotechnology(2023)10.1186/s12951-023-02105-9

N/A

0DataRank · unranked

19 citations

Phuong Linh Nguyen, Han Vit Yu, Xingzhi Li, Huiren Wang, Jeffrey D. Price +10 more

Molecular Subtyping and Survival Analysis of Osteosarcoma Reveals Prognostic Biomarkers and Key Canonical Pathways

Cancers(2023)10.3390/cancers15072134

N/A

0DataRank · unranked

18 citations

Sushil Kumar Shakyawar, Prachi Bajpai, Amr Elkholy, Upender Manne, Nitish K. Mishra +2 more

Oocyte quality is enhanced by hypoglycosylated FSH through increased cell-to-cell interaction during mouse follicle development

Development(2023)10.1242/dev.202170

N/A

0DataRank · unranked

18 citations

Zhenghui Liu, Jai Chand Patel, Sushil Kumar Shakyawar, Chittibabu Guda, George R. Bousfield +3 more

Microbiome diversity in African American, European American, and Egyptian colorectal cancer patients

Heliyon(2023)10.1016/j.heliyon.2023.e18035

N/A

0DataRank · unranked

15 citations

Nagavardhini Avuthu, Mohammed Abdalla, Michael Behring, Prachi Bajpai, Hyung‐Gyoon Kim +22 more

Evaluation of Five Mammalian Models for Human Disease Research Using Genomic and Bioinformatic Approaches

Biomedicines(2023)10.3390/biomedicines11082197

N/A

0DataRank · unranked

13 citations

Pinaki Mondal, Mark A. Carlson, Chittibabu Guda, Jagadesan Sankarasubramanian

The mutational landscape of a US Midwestern breast cancer cohort reveals subtype-specific cancer drivers and prognostic markers

Human Genomics(2023)10.1186/s40246-023-00511-6

N/A

0DataRank · unranked

12 citations

Yuan-De Tan, Peng Xiao, James D. Eudy, Oleg Shats, David L. Kelly +4 more

Transcriptome profile changes in the jejunum of nonhuman primates exposed to supralethal dose of total- or partial-body radiation

BMC Genomics(2023)10.1186/s12864-023-09385-3

N/A

0DataRank · unranked

10 citations

Sahil Sethi, Nagavardhini Avuthu, Stephen Y. Wise, Alana D. Carpenter, Oluseyi O. Fatanmi +3 more

Effects of Acute and Chronic Gabapentin Treatment on Cardiovascular Function of Rats

Cells(2023)10.3390/cells12232705

N/A

0DataRank · unranked

6 citations

Sarah Pribil Pardun, Victoria L. Schaal, Kanika Sharma, Jagadesan Sankarasubramanian, Li‐Rong Yu +4 more

RNA-seq analysis identifies age-dependent changes in expression of mRNAs - encoding N-glycosylation pathway enzymes in mouse gonadotropes

Molecular and Cellular Endocrinology(2023)10.1016/j.mce.2023.111971

N/A

0DataRank · unranked

5 citations

Mark Larsen, Zhenghui Liu, Siddesh Southekal, James D. Eudy, Chittibabu Guda +2 more

StrainIQ: A Novel n-Gram-Based Method for Taxonomic Profiling of Human Microbiota at the Strain Level

Genes(2023)10.3390/genes14081647

N/A

0DataRank · unranked

3 citations

Nagavardhini Avuthu, Chittibabu Guda, Sanjit Pandey

Evaluation of Five Mammalian Models for Human Disease Research Using Genomic and Bioinformatic Approaches

Preprints.org(2023)10.20944/preprints202305.1816.v1

N/A

0DataRank · unranked

1 citations

Pinaki Mondal, Mark A. Carlson, Chittibabu Guda, Jagadesan Sankarasubramanian

GAIN-BRCA: a graph-based AI-net framework for breast cancer subtype classification using multiomics data

Bioinformatics Advances(2024)10.1093/bioadv/vbaf116

N/A

0DataRank · unranked

6 citations

Sushil Kumar Shakyawar, Sahil Sethi, Chittibabu Guda, Jai Chand Patel

iCluF: an unsupervised iterative cluster-fusion method for patient stratification using multiomics data

Bioinformatics Advances(2024)10.1093/bioadv/vbae015

N/A

0DataRank · unranked

17 citations

Balasrinivasa R. Sajja, Jai Chand Patel, Chittibabu Guda, Sushil Kumar Shakyawar

A Machine Learning Model for the Prediction of COVID-19 Severity Using RNA-Seq, Clinical, and Co-Morbidity Data

Diagnostics(2024)10.3390/diagnostics14121284

N/A

0DataRank · unranked

8 citations

Sushil Kumar Shakyawar, Athreya S. Reddy, Jai Chand Patel, Chittibabu Guda, Sahil Sethi

CloudATAC: a cloud-based framework for ATAC-Seq data analysis

Briefings in Bioinformatics(2024)10.1093/bib/bbae090

N/A

0DataRank · unranked

4 citations

M. Jordan Rowley, Angela Maggio, Laura Beaudry, Dale Hawkins, Allen Kim +4 more

A neurovascular progenitor sits at the nexus of glioblastoma lineage trajectories

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.24.604840

N/A

0DataRank · unranked

7 citations

Daria Azizad, Kwanha Yu, Weihong Ge, Matthew Li, Patricia R. Nano +29 more

scAED: a framework for mapping the enhancer state at single-cell resolution

Briefings in Bioinformatics(2025)10.1093/bib/bbaf646

Top 100%

0DataRank

Top 100%0 citations

Jai Chand Patel, Sushil Kumar Shakyawar, Jagadesan Sankarasubramanian, Chittibabu Guda, Avinash M. Veerappa

Global DNA Hypomethylation in Epithelial Ovarian Cancer: Passive Demethylation and Association with Genomic Instability

Cancers(2020)10.3390/cancers12030764

N/A

0DataRank · unranked

146 citations

David Klinkebiel, Carter J. Barger, Sanjit Pandey, Chittibabu Guda, Austin Miller +4 more

Functional, proteomic and bioinformatic analyses of Nrf2‐ and Keap1‐ null skeletal muscle

The Journal of Physiology(2020)10.1113/jp280176

N/A

0DataRank · unranked

61 citations

Vikas Kumar, Neetha Nanoth Vellichirammal, Song‐Young Park, Tara Rudebush, Li‐Rong Yu +10 more

Age related extracellular matrix and interstitial cell phenotype in pulmonary valves

Scientific Reports(2020)10.1038/s41598-020-78507-8

N/A

0DataRank · unranked

16 citations

Vikas Kumar, Peng Xiao, Mitchell Kuss, Jung Yul Lim, Chittibabu Guda +3 more

Identification of Prognostic Markers in Cholangiocarcinoma Using Altered DNA Methylation and Gene Expression Profiles

Frontiers in Genetics(2020)10.3389/fgene.2020.522125

N/A

0DataRank · unranked

18 citations

Meng Niu, Siddesh Southekal, Prachi Bajpai, Amr Elkholy, Upender Manne +2 more

EHD1 and RUSC2 Control Basal Epidermal Growth Factor Receptor Cell Surface Expression and Recycling

Molecular and Cellular Biology(2020)10.1128/mcb.00434-19

N/A

0DataRank · unranked

15 citations

Insha Mushtaq, Bhopal Mohapatra, Haitao Luan, Aaqib M. Bhat, Neha Zutshi +19 more

In-depth Mendelian randomization analysis of causal factors for coronary artery disease

Scientific Reports(2020)10.1038/s41598-020-66027-4

N/A

0DataRank · unranked

16 citations

Peng Xiao, Chittibabu Guda, Yuan-De Tan

Pan-Cancer Analysis Reveals the Diverse Landscape of Novel Sense and Antisense Fusion Transcripts

Molecular Therapy — Nucleic Acids(2020)10.1016/j.omtn.2020.01.023

N/A

0DataRank · unranked

45 citations

Abrar Albahrani, Jasjit K. Banwait, Nitish K. Mishra, You Li, Shrabasti Roychoudhury +7 more

Characterization of the intergenerational impact of in utero and postnatal oxycodone exposure

Translational Psychiatry(2020)10.1038/s41398-020-01012-z

N/A

0DataRank · unranked

30 citations

Victoria L. Schaal, Alexander R. Clark, Sneh Koul, Austin Gowen, Jagadesan Sankarasubramanian +6 more

Red panda: a novel method for detecting variants in single-cell RNA sequencing

BMC Genomics(2020)10.1186/s12864-020-07224-3

N/A

0DataRank · unranked

2 citations

Shrabasti Roychoudhury, Krishna Sarma, Suravi Pramanik, Kishor K. Bhakat, Andrew T. Dudley +3 more

Global DNA hypomethylation in epithelial ovarian cancer: passive demethylation and association with genomic instability

medRxiv(2020)10.1101/2020.01.22.20018374

N/A

0DataRank · unranked

207 citations

David Klinkebiel, Carter J. Barger, Sanjit Pandey, Chittibabu Guda, Austin Miller +4 more

Red Panda: A novel method for detecting variants in single-cell RNA sequencing

Graduate Medical Education Research Journal(2020)10.1101/2020.01.08.898874

N/A

0DataRank · unranked

2 citations

Shrabasti Roychoudhury, Krishna Sarma, Suravi Pramanik, Kishor K. Bhakat, Andrew T. Dudley +3 more

Chittibabu Guda

Indexed papers

Top data-sharing exemplar

Papers