Ying Zhu

Environmental Molecular Sciences Laboratory

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

3.4Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A Comprehensive Atlas of E3 Ubiquitin Ligase Mutations in Neurological Disorders

Frontiers in Genetics(2018)10.3389/fgene.2018.00029

Top 7%

3.4DataRank

Top 7%175 citations

Yarely C. Hoffiz, Antoinette J. Charles, Ying Zhu, Angela M. Mabb, Arlene J. George

Papers

Driven by 42 papers — median percentile 93. Top paper: “A Comprehensive Atlas of E3 Ubiquitin Ligase Mutations in Neurological Disorders”.

A Comprehensive Atlas of E3 Ubiquitin Ligase Mutations in Neurological Disorders

Frontiers in Genetics(2018)10.3389/fgene.2018.00029

Top 7%

3.4DataRank

Top 7%175 citations

Yarely C. Hoffiz, Antoinette J. Charles, Ying Zhu, Angela M. Mabb, Arlene J. George

Parallel measurement of transcriptomes and proteomes from same single cells using nanodroplet splitting

Nature Communications(2024)10.1038/s41467-024-54099-z

N/A

1.0DataRank · unranked

46 citations

Lye Meng Markillie, Hugh Mitchell, Sarah Williams, Kristin Engbrecht, David J. Degnan +10 more

Genome-wide enhancer-gene regulatory maps link causal variants to target genes underlying human cancer risk

Nature Communications(2023)10.1038/s41467-023-41690-z

N/A

0.861DataRank · unranked

32 citations

Can Chen, Zequn Lu, Shuoni Chen, Ming Zhang, Yimin Cai +24 more

Hanging drop sample preparation improves sensitivity of spatial proteomics

Lab on a Chip(2022)10.1039/d2lc00384h

N/A

0.524DataRank · unranked

32 citations

Paul Piehowski, Rui Zhao, Ryan Sontag, Ronald Moore, Kristin Burnum-Johnson +5 more

An optimized approach and inflation media for obtaining complimentary mass spectrometry-based omics data from human lung tissue

Frontiers in Molecular Biosciences(2022)10.3389/fmolb.2022.1022775

N/A

0.501DataRank · unranked

10 citations

Olson, Heather M., Marija Veličković, Juan Wang, Jennifer Kyle, Young‐Mo Kim +15 more

Spatial Proteomics toward Subcellular Resolution by Coupling Deep Ultraviolet Laser Ablation with Nanodroplet Sample Preparation

ACS Measurement Science Au(2023)10.1021/acsmeasuresciau.3c00033

N/A

0.489DataRank · unranked

25 citations

Andrey Liyu, Yu Mi Kwon, Dehong Hu, Sarah Williams, Dušan Veličković +5 more

Mapping microhabitats of lignocellulose decomposition by a microbial consortium

Nature Chemical Biology(2024)10.1038/s41589-023-01536-7

N/A

0.483DataRank · unranked

24 citations

Ruonan Wu, Yuqian Gao, Margaret W. Thairu, Dušan Veličković, Nathalie Munoz Munoz +19 more

The plant-unique protein DRIF1 coordinates with sorting nexin 1 to regulate membrane protein homeostasis

The Plant Cell(2023)10.1093/plcell/koad227

N/A

0.450DataRank · unranked

10 citations

Qiong Zhao, Wenhan Cao, Shuxian Huang, Changyang Ji, Wenxin Zhang +4 more

Proteome-Scale Tissue Mapping Using Mass Spectrometry Based on Label-Free and Multiplexed Workflows

Molecular & Cellular Proteomics(2024)10.1016/j.mcpro.2024.100841

N/A

0.425DataRank · unranked

16 citations

Jongmin Jacob Woo, Fengchao Yu, Sarah Williams, Lye Meng Markillie, Ronald Moore +8 more

Proteome Mapping of the Human Pancreatic Islet Microenvironment Reveals Endocrine–Exocrine Signaling Sphere of Influence

Molecular & Cellular Proteomics(2023)10.1016/j.mcpro.2023.100592

N/A

0.416DataRank · unranked

15 citations

Marija Veličković, James C. Pino, Le Day, Isaac Attah, Adam Swensen +11 more

Coupling microdroplet-based sample preparation, multiplexed isobaric labeling, and nanoflow peptide fractionation for deep proteome profiling of tissue microenvironment

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.13.531822

N/A

0.241DataRank · unranked

4 citations

Thomas Fillmore, Kwame Attah, Camilo Posso, James C. Pino, Rui Zhao +7 more

Spatial top-down proteomics for the functional characterization of human kidney

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.13.580062

N/A

0.236DataRank · unranked

3 citations

James Fulcher, Rashmi Kumar, David J. Degnan, L.A. Lewis, Yen‐Chen Liao +9 more

HSPA12A was identified as a key driver in colorectal cancer GWAS loci 10q26.12 and modulated by an enhancer–promoter interaction

Archives of Toxicology(2023)10.1007/s00204-023-03494-4

N/A

0.230DataRank · unranked

3 citations

Linyun Fan, Fuwei Zhang, Chaoqun Huang, Yimin Cai, Can Chen +24 more

Robust, sensitive, and quantitative single-cell proteomics based on ion mobility filtering

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.30.428333

N/A

0.208DataRank · unranked

3 citations

Gérémy Clair, Sarah Williams, Song Feng, Chia‐Feng Tsai, Ronald Moore +7 more

Dietary prevention of antibiotic‐induced dysbiosis and mortality upon aging in mice

The FASEB Journal(2024)10.1096/fj.202402262r

N/A

0.165DataRank · unranked

2 citations

Sarah G Francisco, Ying Zhu, Tanya LeRoith, Meredith Leigh Davis, Jimmy W. Crott +7 more

A streamlined tandem tip-based workflow for sensitive nanoscale phosphoproteomics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.12.488038

N/A

0DataRank · unranked

2 citations

Yi-Ting Wang, Chuan‐Chih Hsu, Reta Birhanu Kitata, Rosalie Chu, Marija Veličković +12 more

Hanging-droplet sample preparation improves sensitivity of spatial proteomics

ChemRxiv(2022)10.26434/chemrxiv-2022-34klf

N/A

0DataRank · unranked

0 citations

Paul Piehowski, Rui Zhao, Ryan Sontag, Ronald Moore, Kristin Burnum-Johnson +5 more

Spatially resolved top-down proteomics of tissue sections based on a microfluidic nanodroplet sample preparation platform

ChemRxiv(2022)10.26434/chemrxiv-2022-pcn8c-v2

N/A

0DataRank · unranked

0 citations

James Fulcher, David J. Degnan, Sarah Williams, Lisa Bramer, Dušan Veličković +8 more

A streamlined tandem tip-based workflow for sensitive nanoscale phosphoproteomics

Communications Biology(2023)10.1038/s42003-022-04400-x

N/A

0DataRank · unranked

47 citations

Yi-Ting Wang, Chuan‐Chih Hsu, Reta Birhanu Kitata, Rosalie Chu, Marija Veličković +12 more

Rapid, One-Step Sample Processing for Label-Free Single-Cell Proteomics

Journal of the American Society for Mass Spectrometry(2023)10.1021/jasms.3c00159

N/A

0DataRank · unranked

44 citations

Kei G. I. Webber, Xiaofeng Xie, Thy Truong, Alissia Nydegger, Hsien‐Jung L. Lin +4 more

Spatially Resolved Top-Down Proteomics of Tissue Sections Based on a Microfluidic Nanodroplet Sample Preparation Platform

Molecular & Cellular Proteomics(2023)10.1016/j.mcpro.2022.100491

N/A

0DataRank · unranked

27 citations

James Fulcher, David J. Degnan, Sarah M. Williams, Lisa Bramer, Dušan Veličković +8 more

Evaluating Linear Ion Trap for MS3-Based Multiplexed Single-Cell Proteomics

Analytical Chemistry(2023)10.1021/acs.analchem.2c03739

N/A

0DataRank · unranked

25 citations

Fengchao Yu, James Fulcher, Sarah Williams, Kristin Engbrecht, Ronald Moore +5 more

Dominant-negative variants in CBX1 cause a neurodevelopmental disorder

Genetics in Medicine(2023)10.1016/j.gim.2023.100861

N/A

0DataRank · unranked

7 citations

Aiko Iwata‐Otsubo, Kerith‐Rae Dias, Suzanna E.L. Temple, Koji Nagao, Lachlan De Hayr +28 more

Coupling Microdroplet-Based Sample Preparation, Multiplexed Isobaric Labeling, and Nanoflow Peptide Fractionation for Deep Proteome Profiling of the Tissue Microenvironment

Analytical Chemistry(2024)10.1021/acs.analchem.4c00523

N/A

0DataRank · unranked

7 citations

Thomas Fillmore, Isaac Attah, Camilo Posso, James C. Pino, Rui Zhao +7 more

Proteome-scale tissue mapping using mass spectrometry based on label-free and multiplexed workflows

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.04.583367

N/A

0DataRank · unranked

1 citations

Jongmin Jacob Woo, Fengchao Yu, Sarah Williams, Lye Meng Markillie, Ronald Moore +8 more

Spatial top-down proteomics for the functional characterization of human kidney

Clinical Proteomics(2025)10.1186/s12014-025-09531-x

N/A

0DataRank · unranked

9 citations

James Fulcher, Rashmi Kumar, David J. Degnan, L.A. Lewis, Yen‐Chen Liao +9 more

Data from Aberrant RNA Splicing Is a Primary Link between Genetic Variation and Pancreatic Cancer Risk

(2023)10.1158/0008-5472.c.6513904

N/A

0DataRank · unranked

0 citations

Can Chen, Meilin Rao, Ming Zhang, Zequn Lu, Yimin Cai +23 more

HDAC4 Promotes Neuroprotection of Retinal Ganglion Cells After Optic Nerve Injury

Investigative Ophthalmology & Visual Science(2025)10.1167/iovs.66.15.60

N/A

0DataRank · unranked

0 citations

Wenjun Yan, Minjuan Bian, Xin Xia, Michael Nahmou, Ramesh V. Nair +12 more

Automated mass spectrometry imaging of over 2000 proteins from tissue sections at 100-μm spatial resolution

Nature Communications(2020)10.1038/s41467-019-13858-z

N/A

0DataRank · unranked

263 citations

Ying Zhu, Lisa Bramer, Kelly G. Stratton, Rui Zhao, Danny Orton +9 more

Ultrasensitive single-cell proteomics workflow identifies >1000 protein groups per mammalian cell

Chemical Science(2020)10.1039/d0sc03636f

N/A

0DataRank · unranked

244 citations

Khatereh Motamedchaboki, Santosh A. Misal, Yiran Liang, Amanda J. Guise, Thy Truong +6 more

Adapting a Low-Cost and Open-Source Commercial Pipetting Robot for Nanoliter Liquid Handling

SLAS TECHNOLOGY(2020)10.1177/2472630320973591

N/A

0DataRank · unranked

33 citations

Thy Truong, Yiran Liang, Adam L. Aposhian, Kei G. I. Webber, Ying Zhu +4 more

Ultrasensitive single-cell proteomics workflow identifies >1000 protein groups per mammalian cell

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.03.132449

N/A

0DataRank · unranked

12 citations

Khatereh Motamedchaboki, Santosh A. Misal, Yiran Liang, Amanda J. Guise, Thy Truong +6 more

Zika Virus Disrupts Phospho-TBK1 Localization and Mitosis in Human Neuroepithelial Stem Cells and Radial Glia

UNC Libraries(2020)10.17615/632z-q039

N/A

0DataRank · unranked

0 citations

Andrew T.N. Tebbenkamp, Mihovil Pletikos, Tianliuyun Gao, Jernej Mlakar, Luis Varela +25 more

High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip

Nature Communications(2021)10.1038/s41467-021-26514-2

N/A

0DataRank · unranked

197 citations

Sarah Williams, Lye Meng Markillie, Song Feng, Chia‐Feng Tsai, Victor Aguilera-Vazquez +12 more

Surfactant-assisted one-pot sample preparation for label-free single-cell proteomics

Communications Biology(2021)10.1038/s42003-021-01797-9

N/A

0DataRank · unranked

132 citations

Pengfei Zhang, David Scholten, Kendall Martin, Yi-Ting Wang, Rui Zhao +23 more

High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.17.431689

N/A

0DataRank · unranked

28 citations

Sarah Williams, Victor Aguilera-Vazquez, Ryan Sontag, Ronald Moore, Lye Meng Markillie +8 more

Author Correction: High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip

Nature Communications(2021)10.1038/s41467-021-27110-0

N/A

0DataRank · unranked

10 citations

Sarah Williams, Lye Meng Markillie, Song Feng, Chia‐Feng Tsai, Victor Aguilera-Vazquez +12 more

Three-dimensional feature matching improves coverage for single-cell proteomics based on ion mobility filtering

Cell Systems(2022)10.1016/j.cels.2022.02.003

N/A

0DataRank · unranked

93 citations

Gérémy Clair, Sarah Williams, Song Feng, Chia‐Feng Tsai, Ronald Moore +7 more

Directly induced human retinal ganglion cells mimic fetal RGCs and are neuroprotective after transplantation in vivo

Stem Cell Reports(2022)10.1016/j.stemcr.2022.10.011

N/A

0DataRank · unranked

34 citations

Kun‐Che Chang, Suqian Wu, Catalina Sun, Xin Xia, Michael Nahmou +8 more

Proteomic Profiling of Intra-Islet Features Reveals Substructure-Specific Protein Signatures

Molecular & Cellular Proteomics(2022)10.1016/j.mcpro.2022.100426

N/A

0DataRank · unranked

12 citations

Dušan Veličković, Sarah Williams, Ronald Moore, Le Day, Sherry Niessen +9 more

Spatially resolved top-down proteomics of tissue sections based on a microfluidic nanodroplet sample preparation platform

ChemRxiv(2022)10.26434/chemrxiv-2022-pcn8c

N/A

0DataRank · unranked

3 citations

James Fulcher, David J. Degnan, Sarah Williams, Lisa Bramer, Dušan Veličković +8 more

Proteome mapping of the human pancreatic islet microenvironment reveals endocrine-exocrine signaling sphere of influence

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.21.517388

N/A

0DataRank · unranked

3 citations

Marija Veličković, James C. Pino, Le Day, Isaac Attah, Adam Swensen +10 more

Ying Zhu

Indexed papers

Top data-sharing exemplar

Papers