Katrine Whiteson

Also affiliated with University of California System

Biochemistry, Genetics and Molecular BiologyMedicineEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile

0.165Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Deep metatranscriptomic sequencing data of wastewater from Los Angeles, USA, 2023–2024

Scientific Data(2025)10.1038/s41597-025-06475-7

Top 70%

0.165DataRank

Top 70%2 citations

Jason A. Rothman, William J. Bradshaw, Kylie Langlois, Joshua A. Steele, John F. Griffith +3 more

Papers

Driven by 35 papers — median percentile 30. Top paper: “The Cancer Microbiome: Distinguishing Direct and Indirect Effects Requires a Systemic View”.

The Cancer Microbiome: Distinguishing Direct and Indirect Effects Requires a Systemic View

Trends in cancer(2020)10.1016/j.trecan.2020.01.004

N/A

6.0DataRank · unranked

268 citations

Vincent B. Young, Joseph D. Skufca, Fiona Ginty, Traci L. Testerman, Alexander T. Pearson +25 more

Variation in human gut microbiota impacts tamoxifen pharmacokinetics

mBio(2024)10.1128/mbio.01679-24

N/A

0.881DataRank · unranked

19 citations

Sheron Hakopian, Lizett Ortiz de Ora, Ian Tamburini, Julio Avelar‐Barragan, Sunhee Jung +6 more

Characterizing the microbiome of patients with myeloproliferative neoplasms during a Mediterranean diet intervention

mBio(2023)10.1128/mbio.02308-23

N/A

0.445DataRank · unranked

13 citations

Laura F. Mendez Luque, Jenny Nguyen, Hellen Nguyen, Andrew Odegaard, Angela G. Fleischman +2 more

Deep metatranscriptomic sequencing data of wastewater from Los Angeles, USA, 2023–2024

Scientific Data(2025)10.1038/s41597-025-06475-7

Top 70%

0.165DataRank

Top 70%2 citations

Jason A. Rothman, William J. Bradshaw, Kylie Langlois, Joshua A. Steele, John F. Griffith +3 more

RNA Viromics of Southern California Wastewater and Detection of SARS-CoV-2 Single-Nucleotide Variants

Applied and Environmental Microbiology(2021)10.1128/aem.01448-21

N/A

0DataRank · unranked

73 citations

Theresa B. Loveless, Joseph Kapcia, Eric D. Adams, Joshua A. Steele, Amity G. Zimmer-Faust +8 more

Model Systems to Study the Chronic, Polymicrobial Infections in Cystic Fibrosis: Current Approaches and Exploring Future Directions

mBio(2021)10.1128/mbio.01763-21

N/A

0DataRank · unranked

58 citations

Aurélie Crabbé, Rolf Kümmerli, John J. LiPuma, Jennifer M. Bomberger, Jane C. Davies +33 more

Comparing Stable Isotope Enrichment by Gas Chromatography with Time-of-Flight, Quadrupole Time-of-Flight, and Quadrupole Mass Spectrometry

Analytical Chemistry(2021)10.1021/acs.analchem.0c04013

N/A

0DataRank · unranked

8 citations

Bei Gao, Luis Valdiviez, Chao Zhu, Tara Gallagher, Katrine Whiteson +2 more

RNA viromics of Southern California wastewater and detection of SARS-CoV-2 single nucleotide variants

medRxiv(2021)10.1101/2021.07.19.21260815

N/A

0DataRank · unranked

5 citations

Theresa B. Loveless, Joseph Kapcia, Eric D. Adams, Joshua A. Steele, Amity G. Zimmer-Faust +8 more

Capturing actively produced microbial volatile organic compounds from human associated samples with vacuum assisted sorbent extraction

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.16.431476

N/A

0DataRank · unranked

0 citations

Joseph Kapcia, Cynthia I. Rodriguez, Victoria L. Vogel, Sage J. B. Dunham, Katrine Whiteson +1 more

Phage Cocktails Constrain the Growth of Enterococcus

mSystems(2022)10.1128/msystems.00019-22

N/A

0DataRank · unranked

47 citations

Pooja Ghatbale, Hedieh Attai, Clark Hendrickson, Cyril Samillano, Joy Suh +4 more

Distinct colon mucosa microbiomes associated with tubular adenomas and serrated polyps

npj Biofilms and Microbiomes(2022)10.1038/s41522-022-00328-6

N/A

0DataRank · unranked

28 citations

Lauren C. DeDecker, Zachary N. Lu, Bretton Coppedge, William E. Karnes, Katrine Whiteson +1 more

The cure from within? a review of the microbiome and diet in melanoma

Cancer and Metastasis Reviews(2022)10.1007/s10555-022-10029-3

N/A

0DataRank · unranked

20 citations

Danielle Brazel, Julia M. DeRogatis, Jennifer B. Goldstein, Katrine Whiteson, Warren Chow +3 more

Integrating Virus Monitoring Strategies for Safe Non-Potable Water Reuse

Water(2022)10.3390/w14081187

N/A

0DataRank · unranked

17 citations

Heather N. Bischel, Ramesh Goel, Diego Rosso, Samendra P. Sherchan, Katrine Whiteson +3 more

Conceptual Exchanges for Understanding Free-Living and Host-Associated Microbiomes

mSystems(2022)10.1128/msystems.01374-21

N/A

0DataRank · unranked

7 citations

S.H. Light, Brendan J. M. Bohannan, Thomas M. Schmidt, Adam C. Martiny, Nicole A. Hynson +4 more

Supplemental Oxygen Alters the Airway Microbiome in Cystic Fibrosis

mSystems(2022)10.1128/msystems.00364-22

N/A

0DataRank · unranked

11 citations

Sirus Jesudasen, Lindsay Bringhurst, Hui‐Yu Sui, Lauren J. McIver, Katrine Whiteson +7 more

Longitudinal metatranscriptomic sequencing of Southern California wastewater representing 16 million people from August 2020-21 reveals widespread transcription of antibiotic resistance genes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.02.502560

N/A

0DataRank · unranked

7 citations

Andrew Saghir, Seung-Ah Chung, Nicholas Boyajian, Thao Dinh, Jinwoo Kim +9 more

A Retrospective, Observational Study of 12 Cases of Expanded-Access Customized Phage Therapy: Production, Characteristics, and Clinical Outcomes

Clinical Infectious Diseases(2023)10.1093/cid/ciad335

N/A

0DataRank · unranked

94 citations

Justin R. Clark, Haroldo Hernandez Santos, Kyle Weesner, Keiko C. Salazar, Saima Aslam +13 more

Melanoma and microbiota: Current understanding and future directions

Cancer Cell(2023)10.1016/j.ccell.2023.12.003

N/A

0DataRank · unranked

82 citations

Tanisha Jackson, Laura Mählmann, Christina K. Baumgartner, Martin J. Blaser, Allyson L. Byrd +26 more

High-Fiber, Whole-Food Dietary Intervention Alters the Human Gut Microbiome but Not Fecal Short-Chain Fatty Acids

mSystems(2021)10.1128/msystems.00115-21

N/A

0DataRank · unranked

165 citations

Alexander B. Chase, Claudia Weihe, Stephanie B. Orchanian, Stefan Riedel, Clark Hendrickson +5 more

Oral microbial communities in children, caregivers, and associations with salivary biomeasures and environmental tobacco smoke exposure

mSystems(2023)10.1128/msystems.00036-23

N/A

0DataRank · unranked

13 citations

Jenna L. Riis, Katrina R. Hamilton, Clancy Blair, Douglas A. Granger, Katrine Whiteson +1 more

Influence of complement protein C1q or complement receptor C5aR1 on gut microbiota composition in wildtype and Alzheimer’s mouse models

Journal of Neuroinflammation(2023)10.1186/s12974-023-02885-9

N/A

0DataRank · unranked

10 citations

Matthew Gargus, Shu‐Hui Chu, Purnika Selvan, Katrine Whiteson, Andrea J. Tenner +1 more

The great divide: rhamnolipids mediate separation between P. aeruginosa and S. aureus

Frontiers in Cellular and Infection Microbiology(2023)10.3389/fcimb.2023.1245874

N/A

0DataRank · unranked

8 citations

Summer J. Kasallis, Rendell Chang, Quantum Zhuo, Jacqueline Nguyen, Phillip Pham +6 more

Longitudinal sequencing and variant detection of SARS-CoV-2 across Southern California wastewater from April 2020 – August 2021

medRxiv(2023)10.1101/2023.04.14.23288559

N/A

0DataRank · unranked

0 citations

Andrew Saghir, Amity G. Zimmer-Faust, Kylie Langlois, Joshua A. Steele, John F. Griffith +2 more

The great divide: rhamnolipids mediate separation between P. aeruginosa and S. aureus

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.23.546300

N/A

0DataRank · unranked

0 citations

Summer J. Kasallis, Rendell Chang, Quantum Zhuo, Jacqueline Nguyen, Phillip Pham +6 more

55 Bacteriophages, antibiotics, and small-molecule adjuvants against antibiotic-resistant Stenotrophomonas maltophilia

Journal of Cystic Fibrosis(2023)10.1016/s1569-1993(23)00990-6

N/A

0DataRank · unranked

0 citations

Charles W. Miller, G. Kourepenos, Alisha N. Monsibais, Katrine Whiteson, Stephen Dunham

Liquid Chromatography Mass Spectrometry Detection of Antibiotic Agents in Sputum from Persons with Cystic Fibrosis

Antimicrobial Agents and Chemotherapy(2020)10.1128/aac.00927-20

N/A

0DataRank · unranked

15 citations

Stefan Riedel, Joseph Kapcia, Lindsay J. Caverly, Lisa A. Carmody, Linda M. Kalikin +10 more

Sex‐specific associations between AD genotype and the microbiome of human amyloid beta knock‐in (hAβ‐KI) mice

Alzheimer s & Dementia(2024)10.1002/alz.13794

N/A

0DataRank · unranked

14 citations

Julio Avelar‐Barragan, Jason A. Rothman, Eric D. Adams, Gina Faraci, Stefânia Forner +8 more

A simple solid media assay for detection of synergy between bacteriophages and antibiotics

Microbiology Spectrum(2024)10.1128/spectrum.03221-23

N/A

0DataRank · unranked

10 citations

Joseph Oh, Julian M. Jimenez, Roland Liu, Sage J. B. Dunham, Alisha N. Monsibais +15 more

Rapid Antibiotic Susceptibility Determination by Fluorescence Lifetime Tracking of Bacterial Metabolism

ACS Infectious Diseases(2024)10.1021/acsinfecdis.4c00491

N/A

0DataRank · unranked

5 citations

Kumar Perinbam, Quynh Nguyen, Jonathan S. Kim, Francesco Palomba, Katrine Whiteson +4 more

Symposium: What Does the Microbiome Tell Us about Prevention and Treatment of AD/ADRD?

Journal of Neuroscience(2024)10.1523/jneurosci.1295-24.2024

N/A

0DataRank · unranked

5 citations

Claudia Figueroa‐Romero, Sage J. B. Dunham, Gina Faraci, Jason A. Rothman, Katrine Whiteson +7 more

Longitudinal Sequencing and Variant Detection of SARS-CoV-2 across Southern California Wastewater

Applied Microbiology(2024)10.3390/applmicrobiol4020044

N/A

0DataRank · unranked

2 citations

Andrew Saghir, Amity G. Zimmer-Faust, Kylie Langlois, Kayla Raygoza, Joshua A. Steele +3 more

Host DNA depletion on frozen human respiratory samples enables successful metagenomic sequencing for microbiome studies

Research Square(2024)10.21203/rs.3.rs-3638876/v1

N/A

0DataRank · unranked

4 citations

Raymond C. Parrish, Viral S. Shah, Matthew C. Ross, Juwan Cormier, Aribah Baig +8 more

Experimental phage evolution results in expanded host ranges against antibiotic resistant Klebsiella pneumoniae isolates

Nature Communications(2025)10.1038/s41467-025-66062-7

N/A

0DataRank · unranked

8 citations

Alisha N. Blanc, Andrew Sue, Jesse Leonard, Monica Bates, Andrew G. Garcia +14 more

Enhanced suppression of Stenotrophomonas maltophilia by a three-phage cocktail: genomic insights and kinetic profiling

Antimicrobial Agents and Chemotherapy(2025)10.1128/aac.01162-24

N/A

0DataRank · unranked

4 citations

Olivia Tea, Pooja Ghatbale, Sage J. B. Dunham, Mirjam Zünd, Jennifer Phan +15 more

Cervicovaginal Microbiome Composition Is Associated with Metabolic Profiles in Healthy Pregnancy

mBio(2020)10.1128/mbio.01851-20

N/A

0DataRank · unranked

57 citations

Brandon LaMere, Claudia Weihe, Stephen Wandro, Karen L. Lindsay, Pathik D. Wadhwa +10 more

Katrine Whiteson

Indexed papers

Top data-sharing exemplar

Papers