🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Brandon Allen

Yale University

ORCID: 0000-0002-5512-1892
Computer ScienceBiochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 7 papers. Top paper: “A structurally preserved allosteric site in the MIF superfamily affects enzymatic activity and CD74 activation in D-dopachrome tautomerase”.

A structurally preserved allosteric site in the MIF superfamily affects enzymatic activity and CD74 activation in D-dopachrome tautomerase

Journal of Biological Chemistry(2021)10.1016/j.jbc.2021.101061
N/A
0DataRank · unranked
25 citations

Krystle Reiss, Dilip Shah, R. Manjula, Brandon Allen, Eva Murphy +6 more

MptpA Kinetics Enhanced by Allosteric Control of an Active Conformation

Journal of Molecular Biology(2022)10.1016/j.jmb.2022.167540
N/A
0DataRank · unranked
11 citations

Erik Zavala, Brandon Allen, J. Patrick Loria, Víctor S. Batista, Federica Maschietto

Insights into Binding of Single-Stranded Viral RNA Template to the Replication–Transcription Complex of SARS-CoV-2 for the Priming Reaction from Molecular Dynamics Simulations

Biochemistry(2022)10.1021/acs.biochem.1c00755
N/A
0DataRank · unranked
15 citations

Yuanjun Shi, Krystle Reiss, Brandon Allen, Federica Maschietto, Elias Lolis +4 more

Twisting and swiveling domain motions in Cas9 to recognize target DNA duplexes, make double-strand breaks, and release cleaved duplexes

Frontiers in Molecular Biosciences(2023)10.3389/fmolb.2022.1072733
N/A
0DataRank · unranked
22 citations

Pablo R. Arantes, Mohd Ahsan, Souvik Sinha, Gregory W. Kyro, Federica Maschietto +6 more

Mapping N- to C-terminal allosteric coupling through disruption of a putative CD74 activation site in D-dopachrome tautomerase

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.104729
N/A
0DataRank · unranked
9 citations

Vinnie Widjaja, Gregory W. Kyro, Brandon Allen, Pragnya Das, Varsha Prahaladan +5 more

Valproate-coenzyme A conjugate blocks opening of receptor binding domains in the spike trimer of SARS-CoV-2 through an allosteric mechanism

Computational and Structural Biotechnology Journal(2023)10.1016/j.csbj.2023.01.014
N/A
0DataRank · unranked
5 citations

Tianyin Qiu, Jimin Wang, Yuanjun Shi, Brandon Allen, George P. Lisi +3 more

MDiGest: A Python package for describing allostery from molecular dynamics simulations

The Journal of Chemical Physics(2023)10.1063/5.0140453
N/A
0DataRank · unranked
28 citations

Brandon Allen, Gregory W. Kyro, Víctor S. Batista, Federica Maschietto