🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Joe Chan

Children's Hospital of Philadelphia

ORCID: 0000-0002-5627-6693

Also affiliated with University of Pennsylvania

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Supplementary Figure from Epigenome-Wide Study Identifies Epigenetic Outliers in Normal Mucosa of Patients with Colorectal Cancer

(2023)10.1158/1940-6207.22534946
Top 100%
0DataRank
Top 100%0 citations

Bryant M. Schultz, Joe Chan, Claudia Wultsch, Rajveer Singh, Imad Shureiqi +10 more

Papers

Driven by 10 papers — median percentile 0. Top paper: “Embryo cryopreservation leads to sex-specific DNA methylation perturbations in both human and mouse placentas”.

Embryo cryopreservation leads to sex-specific DNA methylation perturbations in both human and mouse placentas

Human Molecular Genetics(2022)10.1093/hmg/ddac138
N/A
0.489DataRank · unranked
25 citations

Jayashri Ghosh, Eric A. Rhon‐Calderón, Yemin Lan, Teri Ord, Charikleia Kalliora +9 more

Validation of a High-Sensitivity Assay for Detection of Chimeric Antigen Receptor T-Cell Vectors Using Low-Partition Digital PCR Technology

Journal of Molecular Diagnostics(2023)10.1016/j.jmoldx.2023.06.002
N/A
0DataRank · unranked
3 citations

Utsav Patel, Amir Momeni Boroujeni, JinJuan Yao, Roger Chan, Joe Chan +18 more

Data from Epigenome-Wide Study Identifies Epigenetic Outliers in Normal Mucosa of Patients with Colorectal Cancer

(2023)10.1158/1940-6207.c.6547712.v1
N/A
0DataRank · unranked
0 citations

Bryant M. Schultz, Joe Chan, Claudia Wultsch, Rajveer Singh, Imad Shureiqi +10 more

Supplementary Figure from Epigenome-Wide Study Identifies Epigenetic Outliers in Normal Mucosa of Patients with Colorectal Cancer

(2023)10.1158/1940-6207.22534946
Top 100%
0DataRank
Top 100%0 citations

Bryant M. Schultz, Joe Chan, Claudia Wultsch, Rajveer Singh, Imad Shureiqi +10 more

A signal processing and deep learning framework for methylation detection using Oxford Nanopore sequencing

Nature Communications(2024)10.1038/s41467-024-45778-y
N/A
0DataRank · unranked
109 citations

Anagha Gouru, Joe Chan, Wanding Zhou, Kai Wang, Mian Umair Ahsan

SCOTCH: isoform-level characterization of gene expression through long-read single-cell RNA sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.29.590597
N/A
0DataRank · unranked
5 citations

Hui‐Qi Qu, Joe Chan, Shizhuo Mu, Charlly Kao, Håkon Håkonarson +2 more

A comparative evaluation of computational models for RNA modification detection using nanopore sequencing with RNA004 chemistry

Briefings in Bioinformatics(2025)10.1093/bib/bbaf404
N/A
0DataRank · unranked
26 citations

Mian Umair Ahsan, Joe Chan, Wen Bo Meng, Shou‐Jiang Gao, Yufei Huang +2 more

Combining panel-based and whole-transcriptome-based gene fusion detection by long-read sequencing

Cell Reports Methods(2025)10.1016/j.crmeth.2025.101111
N/A
0DataRank · unranked
1 citations

Xu Feng, Hannah M. Deutsch, Mian Umair Ahsan, Joe Chan, Zizhuo Liang +4 more

A Comparative Evaluation of Computational Models for RNA modification detection using Nanopore sequencing with RNA004 Chemistry

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.03.636352
N/A
0DataRank · unranked
6 citations

Mian Umair Ahsan, Joe Chan, Wen Bo Meng, Shou‐Jiang Gao, Yufei Huang +2 more

Detection and characterization of neonatal cytomegalovirus through nanopore sequencing using flongle flow cells: Pilot study in Philadelphia, Pennsylvania

Journal of Virological Methods(2025)10.1016/j.jviromet.2025.115245
N/A
0DataRank · unranked
0 citations

Joe Chan, Gabrielle C Galchen, Mian Umair Ahsan, Robert H. Gilman, Kenneth P. Smith +3 more