🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Christian J. Stoeckert

California University of Pennsylvania

ORCID: 0000-0002-5714-991X

Also affiliated with University of Pennsylvania

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
29.8Author DataRank

Indexed papers

7in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 7 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Modeling biomedical experimental processes with OBI

Journal of Biomedical Semantics(2010)10.1186/2041-1480-1-s1-s7
Top 1%
9.6DataRank
Top 1%286 citations

Ryan R. Brinkman, Mélanie Courtot, Dirk Derom, Yongqun He, Phillip Lord +12 more

Papers

Driven by 20 papers — median percentile 95. Top paper: “Modeling biomedical experimental processes with OBI”.

Modeling biomedical experimental processes with OBI

Journal of Biomedical Semantics(2010)10.1186/2041-1480-1-s1-s7
Top 1%
9.6DataRank
Top 1%286 citations

Ryan R. Brinkman, Mélanie Courtot, Dirk Derom, Yongqun He, Phillip Lord +12 more

The Ontology for Biomedical Investigations

PLOS ONE(2016)10.1371/journal.pone.0154556
Top 3%
6.8DataRank
Top 3%390 citations

Mathias Brochhausen, Bill Bug, Marcus C. Chibucos, Kevin Clancy, Mélanie Courtot +40 more

Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)

Nature Biotechnology(2008)10.1038/nbt1391
N/A
6.5DataRank · unranked
114 citations

On behalf of the MGED Society, Jules J. Berman, G. Steven Bova, Ann-Christine Syvanen, Roger E. Bumgarner +40 more

The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics

Nature Biotechnology(2007)10.1038/nbt1347
Top 3%
6.0DataRank
Top 3%106 citations

Michael Miller, Ruedi Aebersold, Rolf Apweiler, On behalf of the MGED Society, Ann-Christine Syvanen +24 more

OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies

Database(2021)10.1093/database/baab069
N/A
5.0DataRank · unranked
210 citations

Nicolas A Matentzoglu, James A. Overton, Randi Vita, James P. Balhoff, Pier Luigi Buttigieg +20 more

VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center

Nucleic Acids Research(2021)10.1093/nar/gkab929
Top 5%
4.8DataRank
Top 5%531 citations

Cristina Aurrecoechea, Matthieu Barba, Ana Barreto, Evelina Y. Basenko, Wojciech Bażant +61 more

Microarray Data Standards: An Open Letter

Environmental Health Perspectives(2004)10.1289/ehp.112-1277123
N/A
1.6DataRank · unranked
23 citations

Ann-Christine Syvanen, Helen Causton, Steve Chervitz, Ron Edgar, Daniele Iudicone +14 more

ClinEpiDB: an open-access clinical epidemiology database resource encouraging online exploration of complex studies

Gates Open Research(2020)10.12688/gatesopenres.13087.2
Top 14%
1.4DataRank
Top 14%33 citations

Brian P. Brunk, Grant Dorsey, Omar S. Harb, Danica Helb, J. Judkins +8 more

NIAGADS Alzheimer's GenomicsDB: A resource for exploring Alzheimer's disease genetic and genomic knowledge

Alzheimer s & Dementia(2023)10.1002/alz.13509
Top 19%
1.1DataRank
Top 19%35 citations

Otto Valladares, Pavel P. Kuksa, Prabhakaran Gangadharan, Wan‐Ping Lee, Jeffrey Cifello +9 more

Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project

Nature Biotechnology(2008)10.1038/nbt.1411
N/A
0.950DataRank · unranked
561 citations

Dawn Field, Jan Aerts, Rolf Apweiler, Michael Ashburner, On behalf of the MGED Society +63 more

Modelling kidney disease using ontology: insights from the Kidney Precision Medicine Project

Nature Reviews Nephrology(2020)10.1038/s41581-020-00335-w
N/A
0.641DataRank · unranked
71 citations

Lucy Lu Wang, Jennifer A. Schaub, John F. O’Toole, Becky Steck, Avi Z. Rosenberg +24 more

Wrestling with SUMO and bio-ontologies

Nature Biotechnology(2006)10.1038/nbt0106-21b
N/A
0.554DataRank · unranked
4 citations

Ann-Christine Syvanen, Helen Causton, Liju Fan, Jennifer Fostel, Gilberto Fragoso +24 more

Temporal Transcriptome Analysis Reveals Dynamic Gene Expression Patterns Driving β-Cell Maturation

Frontiers in Cell and Developmental Biology(2021)10.3389/fcell.2021.648791
N/A
0.457DataRank · unranked
20 citations

Chen Huang, Elisabetta Manduchi, Yanwen Xu, Prasanna K. Dadi, Leah A. Potter +6 more

OBO Foundry in 2021: Operationalizing Open Data Principles to Evaluate Ontologies

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.01.446587
N/A
0.406DataRank · unranked
14 citations

Nicolas A Matentzoglu, James A. Overton, Randi Vita, James P. Balhoff, Pier Luigi Buttigieg +20 more

Standardization of assay representation in the Ontology for Biomedical Investigations

Database(2021)10.1093/database/baab040
N/A
0.360DataRank · unranked
10 citations

Jie Zheng, Rebecca Jackson, Damion Dooley, James A. Overton, Mark A. Miller +16 more

NIAGADS Alzheimer’s GenomicsDB: A resource for exploring Alzheimer’s Disease genetic and genomic knowledge

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.23.310276
Top 65%
0.208DataRank
Top 65%3 citations

Otto Valladares, Pavel P. Kuksa, Prabhakaran Gangadharan, Wan‐Ping Lee, Jeffrey Cifello +9 more

Development of an Application Ontology for Beta Cell Genomics Based On the Ontology for Biomedical Investigations

ICBO(2025)10.1101/2025.08.18.670933
N/A
0DataRank · unranked
13 citations

Elisabetta Manduchi, Christian J. Stoeckert, Jie Zheng

Phospho-PTM proteomic discovery of novel EPO- modulated kinases and phosphatases, including PTPN18 as a positive regulator of EPOR/JAK2 Signaling

Cellular Signalling(2020)10.1016/j.cellsig.2020.109554
N/A
0DataRank · unranked
14 citations

Emily Greenfest‐Allen, Su Su, Christian J. Stoeckert, Matthew P. Stokes, Don M. Wojchowski +1 more

A developmental lineage-based gene co-expression network for mouse pancreatic β-cells reveals a role for Zfp800 in pancreas development

Development(2021)10.1242/dev.196964
N/A
0DataRank · unranked
23 citations

Karrie D. Dudek, Emily Greenfest‐Allen, Jeeyeon Cha, Elisabetta Manduchi, Leah Potter Case +7 more

Phospho-proteomic discovery of novel signal transducers including thioredoxin-interacting protein as mediators of erythropoietin-dependent human erythropoiesis

Experimental Hematology(2020)10.1016/j.exphem.2020.03.003
N/A
0DataRank · unranked
17 citations

Emily Greenfest‐Allen, Edward Jachimowicz, Christian J. Stoeckert, Matthew P. Stokes, Antony W. Wood +2 more