🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Scott Emrich

Knoxville College

ORCID: 0000-0002-5741-4517

Also affiliated with University of Tennessee at Knoxville

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile
0.884Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A community effort to optimize sequence-based deep learning models of gene regulation

Nature Biotechnology(2024)10.1038/s41587-024-02414-w
Top 30%
0.676DataRank
Top 30%35 citations

Daria Nogina, Dmitry Penzar, Dohoon Lee, Danyeong Lee, Nayeon Kim +106 more

Papers

Driven by 19 papers — median percentile 53. Top paper: “A community effort to optimize sequence-based deep learning models of gene regulation”.

A community effort to optimize sequence-based deep learning models of gene regulation

Nature Biotechnology(2024)10.1038/s41587-024-02414-w
Top 30%
0.676DataRank
Top 30%35 citations

Daria Nogina, Dmitry Penzar, Dohoon Lee, Danyeong Lee, Nayeon Kim +106 more

PeakMatcher facilitates updated Aedes aegypti embryonic cis-regulatory element map

Hereditas(2021)10.1186/s41065-021-00172-2
Top 65%
0.208DataRank
Top 65%3 citations

Susanta K. Behura, Marc S. Halfon, Scott Emrich, Molly Duman‐Scheel, Ronald J. Nowling

The anatomy of native CRAC channel(s)

Current Opinion in Physiology(2020)10.1016/j.cophys.2020.07.012
N/A
0DataRank · unranked
33 citations

Scott Emrich, Mohamed Trebak, Ryan E. Yoast

Phlebotomus papatasi sand fly predicted salivary protein diversity and immune response potential based on in silico prediction in Egypt and Jordan populations

PLoS neglected tropical diseases(2020)10.1371/journal.pntd.0007489
N/A
0DataRank · unranked
2 citations

Marcelo Ramalho-Ortigão, Iliano V. Coutinho-Abreu, Rami Mukbel, Hanafi A. Hanafi, Shabaan S. El-Hossary +9 more

Network analysis of synonymous codon usage

Bioinformatics(2020)10.1093/bioinformatics/btaa603
N/A
0DataRank · unranked
1 citations

Gabriel Wright, Jacob Piland, Jun Li, Patricia L. Clark, Scott Emrich +2 more

Analysis of computational codon usage models and their association with translationally slow codons

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.26.010488
N/A
0DataRank · unranked
0 citations

Anabel Rodríguez, Jun Li, Patricia L. Clark, Tijana Milenković, Scott Emrich +1 more

The power and promise of genetic mapping from Plasmodium falciparum crosses utilizing human liver-chimeric mice

Communications Biology(2021)10.1038/s42003-021-02210-1
N/A
0DataRank · unranked
29 citations

Sudhir Kumar, Nelly Carmago, Meseret T. Haile, Catherine Jett, Lisa A. Checkley +14 more

The genome of the stable fly, Stomoxys calcitrans, reveals potential mechanisms underlying reproduction, host interactions, and novel targets for pest control

BMC Biology(2021)10.1186/s12915-021-00975-9
N/A
0DataRank · unranked
52 citations

Serap Aksoy, Geoffrey M. Attardo, Greta Buckmeier, Xiaoting Chen, Craig J. Coates +34 more

CHARMING : Harmonizing synonymous codon usage to replicate a desired codon usage pattern

Protein Science(2021)10.1002/pro.4223
N/A
0DataRank · unranked
30 citations

Anabel Rodríguez, Jun Li, Tijana Milenković, Scott Emrich, Patricia L. Clark +1 more

Analysis of computational codon usage models and their association with translationally slow codons

PLoS ONE(2020)10.1371/journal.pone.0232003
N/A
0DataRank · unranked
13 citations

Anabel Rodríguez, Jun Li, Patricia L. Clark, Tijana Milenković, Scott Emrich +1 more

Fine-Grained Synonymous Codon Usage Patterns and their Potential Role in Functional Protein Production

2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)(2021)10.1109/bibm52615.2021.9669745
N/A
0DataRank · unranked
1 citations

Jun Li, Scott Emrich, Ashley Babjac

Multi‐layer sequential network analysis improves protein 3D structural classification

Proteins Structure Function and Bioinformatics(2022)10.1002/prot.26349
N/A
0DataRank · unranked
9 citations

Jacob Piland, Patricia L. Clark, Scott Emrich, Jun Li, Tijana Milenković +1 more

Synonymous codon substitutions regulate transcription and translation of an upstream gene

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.05.502938
N/A
0DataRank · unranked
3 citations

Gabriel Wright, Taylor J. Lundgren, McKenze J. Moss, Jun Li, Tijana Milenković +5 more

Standing genetic variation and chromosome differences drove rapid ecotype formation in a major malaria mosquito

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.21.517335
N/A
0DataRank · unranked
0 citations

Carlo Costantini, N’Falé Sagnon, Wamdaogo M. Guelbéogo, Scott Emrich, Andrew D. Kern +3 more

Standing genetic variation and chromosome differences drove rapid ecotype formation in a major malaria mosquito

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2219835120
N/A
0DataRank · unranked
22 citations

Carlo Costantini, N’Falé Sagnon, Wamdaogo M. Guelbéogo, Scott Emrich, Andrew D. Kern +3 more

Profiling Expression Strategies for a Type III Polyketide Synthase in a Lysate-Based, Cell-free System

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.30.569483
N/A
0DataRank · unranked
1 citations

Jaime Lorenzo N. Dinglasan, Ghaeath S. K. Abbas, J. William Barker, Madeline E. Spradley, Elijah R. Greene +6 more

The chromosome-scale genome assembly for the West Nile vector Culex quinquefasciatus uncovers patterns of genome evolution in mosquitoes

BMC Biology(2024)10.1186/s12915-024-01825-0
N/A
0DataRank · unranked
31 citations

Chujia Chen, Mark Potters, Anastasia N. Naumenko, Varvara Lukyanchikova, Reem A. Masri +27 more

Synonymous codon substitutions modulate transcription and translation of a divergent upstream gene by modulating antisense RNA production

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2405510121
N/A
0DataRank · unranked
15 citations

Jacob D. Diehl, Gabriel Wright, Christopher David Bonar, Taylor J. Lundgren, McKenze J. Moss +7 more

Profiling expression strategies for a type III polyketide synthase in a lysate-based, cell-free system

Scientific Reports(2024)10.1038/s41598-024-61376-w
N/A
0DataRank · unranked
10 citations

Jaime Lorenzo N. Dinglasan, Ghaeath S. K. Abbas, J. William Barker, Madeline E. Spradley, Elijah R. Greene +6 more