Alexander V. Alekseyenko

ORCID: 0000-0002-5748-2085

Also affiliated with MUSC Hollings Cancer Center

Biochemistry, Genetics and Molecular BiologyComputer ScienceMedicineDentistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile

0.495Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Each patient is a research biorepository: informatics-enabled research on surplus clinical specimens via the living BioBank

Journal of the American Medical Informatics Association(2020)10.1093/jamia/ocaa236

Top 39%

0.495DataRank

Top 39%6 citations

Bashir ‎Hamidi, Trevor D. Faith, Keith A. Crandall, Jennifer G. Powers, Christopher Metts +5 more

Papers

Driven by 40 papers — median percentile 61. Top paper: “Each patient is a research biorepository: informatics-enabled research on surplus clinical specimens via the living BioBank”.

Each patient is a research biorepository: informatics-enabled research on surplus clinical specimens via the living BioBank

Journal of the American Medical Informatics Association(2020)10.1093/jamia/ocaa236

Top 39%

0.495DataRank

Top 39%6 citations

Bashir ‎Hamidi, Trevor D. Faith, Keith A. Crandall, Jennifer G. Powers, Christopher Metts +5 more

Enabling the clinical application of artificial intelligence in genomics: a perspective of the AMIA Genomics and Translational Bioinformatics Workgroup

Journal of the American Medical Informatics Association(2023)10.1093/jamia/ocad211

N/A

0.434DataRank · unranked

17 citations

Radha Nagarajan, Chen Wang, Murat Sincan, Robert R. Freimuth, David B. Everman +14 more

Lupus disease flares are concordant with immune responses to blooms of lipoglycan-expressing Ruminococcus blautia gnavus strains arising from unstable gut microbiota communities

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.28.498027

N/A

0.176DataRank · unranked

2 citations

Ze Chen, Peter Izmirly, Lea Ann Chen, Zhi Li, Alejandro Pironti +11 more

Plasma levels of interleukin-1 receptor antagonist (IL1Ra) predict radiographic progression of symptomatic knee osteoarthritis

UNC Libraries(2020)10.17615/wk0q-5374

N/A

0DataRank · unranked

3 citations

Joanne M. Jordan, Alexander V. Alekseyenko, L. Rybak, Z. Li, Jonathan Samuels +10 more

A single strain of Bacteroides fragilis protects gut integrity and reduces GVHD

JCI Insight(2021)10.1172/jci.insight.136841

N/A

0DataRank · unranked

93 citations

Yongxia Wu, Taylor Ticer, Steven Schutt, David Bastian, Hee-Jin Choi +8 more

Evidence for Differentiation of Colon Tissue Microbiota in Patients with and without Postoperative Hirschsprung's Associated Enterocolitis: A Pilot Study

Pediatric Gastroenterology Hepatology & Nutrition(2021)10.5223/pghn.2021.24.1.30

N/A

0DataRank · unranked

31 citations

David Collins, Robert Wilson, Alexander V. Alekseyenko, Ricardo A. Arbizu

Immune Responses Vary in Preinvasive Colorectal Lesions by Tumor Location and Histology

Cancer Prevention Research(2021)10.1158/1940-6207.capr-20-0592

N/A

0DataRank · unranked

14 citations

Georges J. El Nahas, Christine Bookhout, Jessica E. Thaxton, David Lewin, Nana Nikolaishvili‐Feinberg +7 more

Rigorous Plasma Microbiome Analysis Method Enables Disease Association Discovery in Clinic

Frontiers in Microbiology(2021)10.3389/fmicb.2020.613268

N/A

0DataRank · unranked

25 citations

Alexander V. Alekseyenko, Elizabeth Ogunrinde, Min Li, Quan‐Zhen Li, Lei Huang +7 more

Preventing or controlling periodontitis reduces the occurrence of osteonecrosis of the jaw (ONJ) in rice rats (Oryzomys palustris)

Bone(2021)10.1016/j.bone.2021.115866

N/A

0DataRank · unranked

21 citations

Jonathan G. Messer, Abel Abraham, Jessica M. Jiron, Alexander V. Alekseyenko, R. Israel +10 more

Comparison of a Cancer Family History Collection and Risk Assessment Tool – ItRunsInMyFamily – with Risk Assessment by Health-Care Professionals

Public Health Genomics(2021)10.1159/000520001

N/A

0DataRank · unranked

6 citations

Brandon M. Welch, Caitlin G. Allen, Lewis J. Frey, Heath Morrison, Joshua D. Schiffman +5 more

Preinvasive Colorectal Lesions of African Americans Display an Immunosuppressive Signature Compared to Caucasian Americans

Frontiers in Oncology(2021)10.3389/fonc.2021.659036

N/A

0DataRank · unranked

4 citations

Georges J. Nahhas, Christine Bookhout, David Lewin, Chrystal M. Paulos, Nana Nikolaishvili‐Feinberg +9 more

511 Disease flares in lupus are concordant with Ruminococcus Blautia Gnavus blooms arising within unstable gut microbiota communities

Abstracts(2021)10.1136/lupus-2021-lupus21century.29

N/A

0DataRank · unranked

0 citations

Ze Chen, Peter Izmirly, David Fenyö, Jill P. Buyon, Alexander V. Alekseyenko +2 more

Minocycline-induced disruption of the intestinal FXR/FGF15 axis impairs osteogenesis in mice

JCI Insight(2022)10.1172/jci.insight.160578

N/A

0DataRank · unranked

35 citations

Amy J. Warner, Jessica D. Hathaway‐Schrader, Vincenza L. Geiser, Joseph Kim, Joy E. Gerasco +9 more

Not all phenotypes are created equal: covariates of success in e-phenotype specification

Journal of the American Medical Informatics Association(2022)10.1093/jamia/ocac157

N/A

0DataRank · unranked

7 citations

Patrick A. Flume, Kit N. Simpson, Alexander V. Alekseyenko, Bashir ‎Hamidi

Longitudinal gut microbiome analyses and blooms of pathogenic strains during lupus disease flares

Annals of the Rheumatic Diseases(2023)10.1136/ard-2023-223929

N/A

0DataRank · unranked

66 citations

Ze Chen, Peter Izmirly, Lea Ann Chen, Zhi Li, Chongda Zhang +12 more

The adolescent and young adult microbiome and its association with substance use: a scoping review

Alcohol and Alcoholism(2023)10.1093/alcalc/agad055

N/A

0DataRank · unranked

8 citations

Anna E. Kirkland, ReJoyce Green, Melinda A. Engevik, Alexander V. Alekseyenko, Lorenzo Leggio +3 more

Prolonged Antibiotic Exposure during Adolescence Dysregulates Liver Metabolism and Promotes Adiposity in Mice

American Journal Of Pathology(2023)10.1016/j.ajpath.2023.02.014

N/A

0DataRank · unranked

8 citations

Amy J. Warner, Vincenza L. Geiser, Jessica D. Hathaway‐Schrader, Alexander V. Alekseyenko, Julie L Marshall +3 more

Antibiotic prophylaxis dysregulates dental implant placement surgery‐induced osteoimmune wound healing and attenuates the alveolar bone–implant interface in mice

Journal Of Clinical Periodontology(2023)10.1111/jcpe.13875

N/A

0DataRank · unranked

4 citations

Novin Pishevar, Leonard J. Cochrane, Andrew Reynolds, Joseph Kim, Ivan Korostenskij +9 more

Predicting Mammogram Screening Follow Through with Electronic Health Record and Geographically Linked Data

Cancer Research Communications(2023)10.1158/2767-9764.crc-23-0263

N/A

0DataRank · unranked

4 citations

Kit N. Simpson, Leslie Lenert, Vanessa A. Díaz, Alexander V. Alekseyenko, Matthew Davis

Characterizing Patient Phenotypes and Emerging Trends in Application of Spatial Analysis in Individual-Level Health Data

Research Square(2023)10.21203/rs.3.rs-3443865/v1

N/A

0DataRank · unranked

2 citations

Bashir ‎Hamidi, Leslie Lenert, Alexander V. Alekseyenko, Abolfazl Mollalo

Mammogram Uptake from Social Determinants of Health Can Be Lost in Translation to Individual Patients

Research Square(2023)10.21203/rs.3.rs-3298459/v1

N/A

0DataRank · unranked

1 citations

Kit N. Simpson, Vanessa A. Díaz, Alexander V. Alekseyenko, Matthew Davis

The hidden microbiome of hospital infection surveillance testing: biomarkers of health outcomes in MRSA and VRE colonization

Research Square(2023)10.21203/rs.3.rs-3299277/v1

N/A

0DataRank · unranked

1 citations

Lisa L. Steed, Scott Curry, Cassandra D. Salgado, Alexander V. Alekseyenko, Bashir ‎Hamidi

Red Flag/Blue Flag visualization of a common CNN for text classification

JAMIA Open(2023)10.1093/jamiaopen/ooac112

N/A

0DataRank · unranked

0 citations

Jihad S. Obeid, Ken Catchpole, Alexander V. Alekseyenko, John Del Gaizo

Online algorithm for assignment of specimens to pooled or individual testing using risk models provides a practical way to increase testing capacity

F1000Research(2023)10.12688/f1000research.126285.1

N/A

0DataRank · unranked

0 citations

Alexander V. Alekseyenko

SpaceANOVA: Spatial Co-occurrence Analysis of Cell Types in Multiplex Imaging Data Using Point Process and Functional ANOVA

Journal of Proteome Research(2024)10.1021/acs.jproteome.3c00462

N/A

0DataRank · unranked

15 citations

Brian Neelon, Peggi M. Angel, Elizabeth C. O’Quinn, Elizabeth G. Hill, Thao Vu +5 more

Machine learning in healthcare citizen science: A scoping review

International Journal of Medical Informatics(2024)10.1016/j.ijmedinf.2024.105766

N/A

0DataRank · unranked

4 citations

Blessing Torsu, Dmitry Scherbakov, Abolfazl Mollalo, Jihad S. Obeid, Alexander V. Alekseyenko +2 more

Adolescent alcohol use is associated with differences in the diversity and composition of the oral microbiome

Alcohol Clinical and Experimental Research(2024)10.1111/acer.15331

N/A

0DataRank · unranked

3 citations

Anna E. Kirkland, ReJoyce Green, Helen Liu, Janiece Glover, Taylor Ticer +6 more

Factors associated with Alzheimer's Disease Dementia prevalence in the United States: A county-level spatial machine learning analysis

medRxiv(2024)10.1101/2024.07.16.24310529

N/A

0DataRank · unranked

2 citations

George Grekousis, Andreana Benitez, Hermes Flórez, Brian Neelon, Leslie Lenert +2 more

Application of Spatial Analysis for Electronic Health Records: Characterizing Patient Phenotypes and Emerging Trends

Research Square(2024)10.21203/rs.3.rs-3443865/v2

N/A

0DataRank · unranked

0 citations

Bashir ‎Hamidi, Leslie Lenert, Alexander V. Alekseyenko, Abolfazl Mollalo

County Mammogram Uptake can be Predicted from Social Determinants of Health, but Patterns Do Not Hold for Individual Patients

Fortune Journal of Health Sciences(2024)10.26502/fjhs.171

N/A

0DataRank · unranked

0 citations

Kit Simpson, Vanessa A. Díaz, Alexander V. Alekseyenko, Matthew Davis

MD3F: Multivariate Distance Drift Diffusion Framework for High-Dimensional Datasets

Genes(2024)10.3390/genes15050582

N/A

0DataRank · unranked

0 citations

Patricia Corby, Alexander V. Alekseyenko, Jessica Zielinski

Geospatial Analysis of the Association between Medicaid Ex-pansion, Minimum Wage Policies, and Alzheimer's Disease Dementia Prevalence in the United States

medRxiv(2024)10.1101/2024.09.10.24313418

N/A

0DataRank · unranked

0 citations

Sara Knox, Jessica Meng, Andreana Benitez, Leslie Lenert, Alexander V. Alekseyenko +1 more

Application of Intersectionality Framework and Area-level Indicators in Machine Learning Analysis of Depression Disparities in All of Us Research Program Data

Research Square(2024)10.21203/rs.3.rs-5536130/v1

N/A

0DataRank · unranked

0 citations

Michael Marrone, Leslie Lenert, Alexander V. Alekseyenko, Dmitry Scherbakov

Rural–urban disparities of Alzheimer's disease and related dementias: A scoping review

Alzheimer s & Dementia Translational Research & Clinical Interventions(2025)10.1002/trc2.70047

N/A

0DataRank · unranked

25 citations

Maxwell Cutty, Sara Knox, Alexander V. Alekseyenko, Abolfazl Mollalo, Marilyn Kramer

Ceramide-Induced Metabolic Stress Depletes Fumarate and Drives Mitophagy to Mediate Tumor Suppression

Cancer Research(2025)10.1158/0008-5472.can-24-4042

N/A

0DataRank · unranked

7 citations

Firdevs Cansu Atilgan, Mohamed Faisal Kassir, Han Gyul Lee, Alhaji H. Janneh, Wyatt Wofford +14 more

Clinical Significance of Marital Status and Changes in StatusExtracted from Unstructured Clinical Notes

Research Square(2025)10.21203/rs.3.rs-6578415/v1

N/A

0DataRank · unranked

0 citations

Paul M. Heider, Jihad S. Obeid, Alexander V. Alekseyenko, Leslie Lenert, Dmitry Scherbakov

The Influences of Bioinformatics Tools and Reference Databases in Analyzing the Human Oral Microbial Community

Genes(2020)10.3390/genes11080878

N/A

0DataRank · unranked

62 citations

Qianhao Li, Smruti Pushalkar, Bidisha Paul, Tito A. Sandoval, Angela R. Kamer +7 more

Application of Intersectionality Framework and Area-level Indicators in Machine Learning Analysis of Depression Disparities in All of Us Research Program Data

Research Square(2025)10.21203/rs.3.rs-5536130/v2

N/A

0DataRank · unranked

0 citations

Michael Marrone, Leslie Lenert, Alexander V. Alekseyenko, Dmitry Scherbakov

The Gut Microbiome and Xenobiotics: Identifying Knowledge Gaps

Toxicological Sciences(2020)10.1093/toxsci/kfaa060

N/A

0DataRank · unranked

34 citations

Charlene A. McQueen, Donna L. Mendrick, Donna Gulezian, Carl E. Cerniglia, Steven L. Foley +12 more

Platelet and hemoglobin count at diagnosis are associated with survival in African American and Caucasian patients with colorectal cancer

Cancer Epidemiology(2020)10.1016/j.canep.2020.101746

N/A

0DataRank · unranked

17 citations

Hong Li, J. Grant Brazeal, David Lewin, Shaoli Sun, Aïssatou Bâ +5 more

Alexander V. Alekseyenko

Indexed papers

Top data-sharing exemplar

Papers