Davit A. Potoyan

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 35 papers. Top paper: “Protein thermal sensing regulates physiological amyloid aggregation”.

Protein thermal sensing regulates physiological amyloid aggregation

Nature Communications(2024)10.1038/s41467-024-45536-0

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0.427DataRank · unranked

12 citations

Evgenia A. Momchilova, Daniel Burns, Sahil Chandhok, Richard Zapf, Holger Wille +3 more

Sequence-encoded and Composition-dependent Protein-RNA Interactions Control Multiphasic Condensate Morphologies

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.30.273748

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0DataRank · unranked

28 citations

Muralikrishna Raju, Ibraheem Alshareedah, Richoo B. Davis, Davit A. Potoyan, Priya R. Banerjee +1 more

Phase Transition of RNA-protein Complexes into Ordered Hollow Condensates

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.10.902353

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0DataRank · unranked

12 citations

Mahdi Muhammad Moosa, Muralikrishna Raju, Davit A. Potoyan, Priya R. Banerjee, Ibraheem Alshareedah

Computing free energies of protein conformations from explicit solvent simulations

UNC Libraries(2020)10.17615/xvwe-8v24

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0DataRank · unranked

0 citations

Michael Rubinstein, Pavel I. Zhuravlev, Sangwook Wu, Garegin A. Papoian, Davit A. Potoyan

Sequence-encoded and composition-dependent protein-RNA interactions control multiphasic condensate morphologies

Nature Communications(2021)10.1038/s41467-021-21089-4

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0DataRank · unranked

277 citations

Muralikrishna Raju, Ibraheem Alshareedah, Richoo B. Davis, Davit A. Potoyan, Priya R. Banerjee +1 more

Programmable viscoelasticity in protein-RNA condensates with disordered sticker-spacer polypeptides

Nature Communications(2021)10.1038/s41467-021-26733-7

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0DataRank · unranked

275 citations

Mahdi Muhammad Moosa, Matthew Pham, Davit A. Potoyan, Priya R. Banerjee, Ibraheem Alshareedah

The interplay of chromatin phase separation and lamina interactions in nuclear organization

Biophysical Journal(2021)10.1016/j.bpj.2021.10.012

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0DataRank · unranked

51 citations

Michele Di Pierro, Davit A. Potoyan, Rabia Laghmach

Programmable Viscoelasticity in Protein-RNA Condensates with Disordered Sticker-Spacer Polypeptides

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.24.427968

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0DataRank · unranked

21 citations

Mahdi Muhammad Moosa, Matthew Pham, Davit A. Potoyan, Priya R. Banerjee, Ibraheem Alshareedah

The interplay of chromatin phase separation and lamina interactions in nuclear organization

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.16.435657

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0DataRank · unranked

10 citations

Michele Di Pierro, Davit A. Potoyan, Rabia Laghmach

BIAPSS - BioInformatic Analysis of liquid-liquid Phase-Separating protein Sequences

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.11.430806

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0DataRank · unranked

0 citations

Davit A. Potoyan, Aleksandra E. Badaczewska-Dawid

A comprehensive BIAPSS platform for the physicochemical featurization of phase separating proteins

Research Square(2021)10.21203/rs.3.rs-1053840/v1

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0DataRank · unranked

0 citations

Aleksandra E. Badaczewska-Dawid, Davit A. Potoyan, Vladimir N. Uversky

RNA chain length and stoichiometry govern surface tension and stability of protein-RNA condensates

iScience(2022)10.1016/j.isci.2022.104105

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0DataRank · unranked

61 citations

Ibraheem Alshareedah, Matthew Pham, Muralikrishna Raju, Priya R. Banerjee, Davit A. Potoyan +1 more

A Liquid State Perspective on Dynamics of Chromatin Compartments

Frontiers in Molecular Biosciences(2022)10.3389/fmolb.2021.781981

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0DataRank · unranked

28 citations

Michele Di Pierro, Davit A. Potoyan, Rabia Laghmach

Temperature-sensitive contacts in disordered loops tune enzyme I activity

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2210537119

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0DataRank · unranked

15 citations

Aayushi Singh, Vincenzo Venditti, Davit A. Potoyan, Daniel Burns

BIAPSS: A Comprehensive Physicochemical Analyzer of Proteins Undergoing Liquid–Liquid Phase Separation

International Journal of Molecular Sciences(2022)10.3390/ijms23116204

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0DataRank · unranked

14 citations

Vladimir N. Uversky, Davit A. Potoyan, Aleksandra E. Badaczewska-Dawid

Temperature sensitive contact modes allosterically gate TRPV3

PLoS Computational Biology(2023)10.1371/journal.pcbi.1011545

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0DataRank · unranked

7 citations

Vincenzo Venditti, Davit A. Potoyan, Daniel Burns

Re-entrant transitions of locally stiff RNA chains in the presence of polycations leads to gelated architectures

Soft Matter(2023)10.1039/d3sm00320e

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0DataRank · unranked

5 citations

Davit A. Potoyan, Isha Malhotra

Mapping energy landscapes of homopolymeric RNAs via simulated tempering and deep unsupervised learning

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.10.561750

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0DataRank · unranked

2 citations

Davit A. Potoyan, Vysakh Ramachandran

Conformational landscape of the transcription factor ATF4 is dominated by disordered-mediated inter-domain coupling

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.12.540518

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0DataRank · unranked

0 citations

Steven Siang, Davit A. Potoyan, Julien Roche, Urval Patel

Thermodynamic Coupling of the tandem RRM domains of hnRNP A1 underlie its Pleiotropic RNA Binding Functions

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.17.553700

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0DataRank · unranked

0 citations

Davit A. Potoyan, Srinivasa R. Penumutchu, Abhishek Kumar, Yiqing Wang, Alexandar L. Hansen +4 more

Molecular Drivers of Aging in Biomolecular Condensates: Desolvation, Rigidification, and Sticker Lifetimes

PRX Life(2024)10.1103/prxlife.2.023011

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0DataRank · unranked

37 citations

Davit A. Potoyan, Subhadip Biswas

Atomistic insights into the reentrant phase-transitions in polyuracil and polylysine mixtures

The Journal of Chemical Physics(2024)10.1063/5.0206190

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0DataRank · unranked

10 citations

Davit A. Potoyan, Vysakh Ramachandran

Microscopic Origins of Flow Activation Energy in Biomolecular Condensates

The Journal of Physical Chemistry B(2024)10.1021/acs.jpcb.4c05834

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0DataRank · unranked

6 citations

Priya R. Banerjee, Davit A. Potoyan, Sean Yang

Nucleoprotein Phase-Separation Affinities Revealed via Atomistic Simulations of Short Peptide and RNA Fragments

The Journal of Physical Chemistry Letters(2024)10.1021/acs.jpclett.4c02654

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0DataRank · unranked

5 citations

W. A. Brown, Christopher Gayvert, Davit A. Potoyan, Vysakh Ramachandran

Phase separation of multicomponent peptide mixtures into dehydrated clusters with hydrophilic cores

Biophysical Journal(2024)10.1016/j.bpj.2023.12.027

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0DataRank · unranked

11 citations

Davit A. Potoyan, William Hill Brown

Four-Dimensional Mesoscale Liquid Model of Nucleus Resolves Chromatin's Radial Organization

PRX Life(2024)10.1103/prxlife.2.013006

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0DataRank · unranked

6 citations

Michele Di Pierro, Davit A. Potoyan, Rabia Laghmach

Decoding Biomolecular Condensate Dynamics: An Energy Landscape Approach

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.24.614805

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0DataRank · unranked

1 citations

Davit A. Potoyan, Subhadip Biswas

Nucleoprotein phase-separation affinities revealed via atomistic simulations of short peptide and RNA fragments

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.24.614800

N/A

0DataRank · unranked

0 citations

W. A. Brown, Davit A. Potoyan, Vysakh Ramachandran

Microscopic Origins of Flow Activation Energy in Biomolecular Condensates

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.24.614801

N/A

0DataRank · unranked

0 citations

Davit A. Potoyan, Sean Yang

Histone H3 tail charge patterns govern nucleosome condensate formation and dynamics

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.09.647968

N/A

0DataRank · unranked

4 citations

Anurag Singh, Krishna K. Suresh, Sean Yang, Sarah S Meidl Zahorodny, Ritika Gupta +4 more

Chromatin Binding Regulates Phase Behavior and Morphology of Condensates Formed by Prion-like Domains

Journal of Molecular Biology(2025)10.1016/j.jmb.2025.169398

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0DataRank · unranked

2 citations

Richoo B. Davis, Subhadip Biswas, Sean Yang, Davit A. Potoyan, Priya R. Banerjee +1 more

Viscoelasticity and Interface Properties of Multi-Component Condensates Govern Protein Sequestration and Suppression of Amyloid Formation

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.29.695806

N/A

0DataRank · unranked

4 citations

Anne Bremer, Xinrui Gui, Anurag Singh, Joseph L. Basalla, Sagar Chittori +8 more

Molecular Drivers of RNA Phase Separation

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.20.633842

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0DataRank · unranked

3 citations

Davit A. Potoyan, V Ramachandran

Liquid–liquid phase separation driven compartmentalization of reactive nucleoplasm

Physical Biology(2020)10.1088/1478-3975/abc5ad

N/A

0DataRank · unranked

1 citations

Davit A. Potoyan, Rabia Laghmach

Backbone Rigidity Encodes Universal Viscoelastic Signatures in Biomolecular Condensates

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.10.658939

N/A

0DataRank · unranked

2 citations

Subhadip Biswas, Davit A. Potoyan, Sean Yang