James E. Cox

Also affiliated with University of Utah Health Care

MedicineDentistryBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 63 papers. Top paper: “Mitochondrial fatty acid synthesis coordinates oxidative metabolism in mammalian mitochondria”.

Mitochondrial fatty acid synthesis coordinates oxidative metabolism in mammalian mitochondria

eLife(2020)10.7554/elife.58041

N/A

2.8DataRank · unranked

142 citations

Ashley Solmonson, Scott Rusin, J. Alan Maschek, Claire Bensard, Sarah Fogarty +14 more

Mitochondrial pyruvate carrier is required for optimal brown fat thermogenesis

eLife(2020)10.7554/elife.52558

N/A

2.4DataRank · unranked

68 citations

Stephanie Pearson, James Banks, Trevor S. Tippetts, Jesse N. Velasco‐Silva, Sang Hoon Lee +11 more

The biochemical basis of mitochondrial dysfunction in Zellweger Spectrum Disorder

EMBO Reports(2021)10.15252/embr.202051991

N/A

1.8DataRank · unranked

61 citations

Jeffrey T. Morgan, Sarah Fogarty, Jacob M. Winter, Sandra Lettlová, Jordan A. Berg +14 more

SIRT5 Is a Druggable Metabolic Vulnerability in Acute Myeloid Leukemia

Blood Cancer Discovery(2021)10.1158/2643-3230.bcd-20-0168

N/A

1.8DataRank · unranked

63 citations

Anca Franzini, Anthony D. Pomicter, Brayden J. Halverson, Orlando Antelope, Clinton C. Mason +26 more

Characterizing a Common CERS2 Polymorphism in a Mouse Model of Metabolic Disease and in Subjects from the Utah CAD Study

The Journal of Clinical Endocrinology & Metabolism(2021)10.1210/clinem/dgab155

N/A

0.698DataRank · unranked

18 citations

Annelise M. Poss, J. Alan Maschek, James E. Cox, Paul N. Hopkins, Steven C. Hunt +4 more

Ceramide-induced FGF13 impairs systemic metabolic health

Cell Metabolism(2025)10.1016/j.cmet.2025.03.002

N/A

0.385DataRank · unranked

12 citations

Amanda Kelsey Johnson, Himani Thakkar, Bhawna Chandravanshi, Alec Ksiazek, Ajay Anand +23 more

The mechanism of covalent inhibition of LAR phosphatase by illudalic acid

Bioorganic & Medicinal Chemistry Letters(2024)10.1016/j.bmcl.2024.129740

N/A

0.104DataRank · unranked

1 citations

Nicole J. Rueb, Nathan D. Levinzon, Thomas E. Cheatham, Robert S. Gaston, Kh Tanvir Ahmed +5 more

Msp1/ATAD1 restores mitochondrial function in Zellweger Spectrum Disease

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.19.303826

N/A

0DataRank · unranked

3 citations

Jeffrey T. Morgan, Sarah Fogarty, Jacob M. Winter, Sandra Lettlová, Jordan A. Berg +14 more

Serine Palmitoyltransferase Controls Stemness of Intestinal Progenitors

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.03.409128

N/A

0DataRank · unranked

1 citations

Bhagirath Chaurasia, Vincent Kaddai, Joseph L. Wilkerson, J. Alan Maschek, James E. Cox +10 more

Lysophospholipid acylation modulates plasma membrane lipid organization and insulin sensitivity in skeletal muscle

Journal of Clinical Investigation(2021)10.1172/jci135963

N/A

0DataRank · unranked

77 citations

Xin Rong, J. Alan Maschek, Anthony R.P. Verkerke, Piyarat Siripoksup, Haowei Song +14 more

A Stat1 bound enhancer promotes Nampt expression and function within tumor associated macrophages

Nature Communications(2021)10.1038/s41467-021-22923-5

N/A

0DataRank · unranked

66 citations

H. Atakan Ekiz, Cindy Barba, Soh-Hyun Lee, Marah C. Runtsch, Morgan C. Nelson +8 more

Mitochondrial dysfunction in mouse livers depleted of iron chaperone PCBP1

Free Radical Biology and Medicine(2021)10.1016/j.freeradbiomed.2021.08.232

N/A

0DataRank · unranked

45 citations

Olga Protchenko, Feng‐Min Li, Ethan Baratz, Minoo Shakoury‐Elizeh, J. Alan Maschek +3 more

Low lysophosphatidylcholine induces skeletal muscle myopathy that is aggravated by high‐fat diet feeding

The FASEB Journal(2021)10.1096/fj.202101104r

N/A

0DataRank · unranked

35 citations

Anthony R.P. Verkerke, J. Alan Maschek, Justin L. Shahtout, Piyarat Siripoksup, Hiroaki Eshima +9 more

The immunometabolite itaconate inhibits heme synthesis and remodels cellular metabolism in erythroid precursors

Blood Advances(2021)10.1182/bloodadvances.2021004750

N/A

0DataRank · unranked

28 citations

James E. Cox, Hector A. Bergonia, Amy E. Medlock, John D. Phillips, Harry A. Dailey +1 more

Metabolic reprogramming of the myeloid lineage by Schistosoma mansoni infection persists independently of antigen exposure

PLoS Pathogens(2021)10.1371/journal.ppat.1009198

N/A

0DataRank · unranked

22 citations

Lisa Gibbs, J. Alan Maschek, Márcia Nascimento, Tyler Van Ry, James E. Cox +3 more

SARS‐CoV‐2 innate effector associations and viral load in early nasopharyngeal infection

Physiological Reports(2021)10.14814/phy2.14761

N/A

0DataRank · unranked

18 citations

Frederick R. Adler, Barbara C. Cahill, David R. Cox, James E. Cox, Garett J. Grant +21 more

Multiomic identification of factors associated with progression to cystic kidney disease in mice with nephron Ift88 disruption

American Journal of Physiology-Renal Physiology(2021)10.1152/ajprenal.00409.2021

N/A

0DataRank · unranked

7 citations

Katherine Beebe, Edgar J. Hernández, José M. Lázaro-Guevara, Mónica P. Revelo, Yufeng Huang +4 more

Lipid hydroperoxides promote sarcopenia through carbonyl stress

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.17.473200

N/A

0DataRank · unranked

1 citations

Justin L. Shahtout, Piyarat Siripoksup, Mackenzie Pearson, Ziad S. Mahmassani, Patrick J. Ferrara +15 more

An evolutionary trade-off between host immunity and metabolism drives fatty liver in male mice

Science(2022)10.1126/science.abn9886

N/A

0DataRank · unranked

93 citations

Yew Ann Leong, William C. Krause, Denis Đermadi, J. Alan Maschek, Tyler Van Ry +6 more

Cordyceps inhibits ceramide biosynthesis and improves insulin resistance and hepatic steatosis

Scientific Reports(2022)10.1038/s41598-022-11219-3

N/A

0DataRank · unranked

26 citations

Chad Lamar Talbot, Bhawna Chandravanshi, Alec Ksiazek, Ayushi Sood, Kamrul Hasan Chowdhury +12 more

Following Roux-en-Y gastric bypass surgery, serum ceramides demarcate patients that will fail to achieve normoglycemia and diabetes remission

Med(2022)10.1016/j.medj.2022.05.011

N/A

0DataRank · unranked

17 citations

Benjamin Krick, J. Alan Maschek, Benjamin Haaland, James E. Cox, Prasoona Karra +7 more

Phosphatidylethanolamine facilitates mitochondrial pyruvate entry to regulate metabolic flexibility

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.01.514767

N/A

0DataRank · unranked

2 citations

Guoshen Cao, Ahmad A. Cluntun, J. Alan Maschek, Quentinn Pearce, Marisa J. Lang +9 more

Weight loss improves skeletal muscle mitochondrial energy efficiency

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.21.521461

N/A

0DataRank · unranked

1 citations

Marisa J. Lang, Jordan M. Johnson, Shinya Watanabe, Kelsey McLaughlin, J. Alan Maschek +7 more

Trade-Offs Between Hepatic Host Defense and Metabolic Programs Underlie Sex-Biased Diseases

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.07.475423

N/A

0DataRank · unranked

0 citations

Yew Ann Leong, William C. Krause, Denis Đermadi, J. Alan Maschek, Tyler Van Ry +6 more

Mitochondrial Phosphatidylethanolamine Directly Regulates UCP1 to Promote Brown Adipose Thermogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.26.505474

N/A

0DataRank · unranked

0 citations

Alek D. Peterlin, Enrique Balderas, Elahu G. Sustarsic, J. Alan Maschek, Marisa J. Lang +13 more

Protein-metabolite interactomics of carbohydrate metabolism reveal regulation of lactate dehydrogenase

Science(2023)10.1126/science.abm3452

N/A

0DataRank · unranked

157 citations

Ahmad A. Cluntun, Heidi Schubert, Sean R. Hackett, Jordan A. Berg, Paul G. Leonard +41 more

Mitochondrial phosphatidylethanolamine modulates UCP1 to promote brown adipose thermogenesis

Science Advances(2023)10.1126/sciadv.ade7864

N/A

0DataRank · unranked

67 citations

Alek D. Peterlin, Enrique Balderas, Elahu G. Sustarsic, J. Alan Maschek, Marisa J. Lang +13 more

Lipid hydroperoxides promote sarcopenia through carbonyl stress

eLife(2023)10.7554/elife.85289

N/A

0DataRank · unranked

52 citations

Justin L. Shahtout, Piyarat Siripoksup, Mackenzie Pearson, Ziad S. Mahmassani, Patrick J. Ferrara +15 more

Ceramides Increase Fatty Acid Utilization in Intestinal Progenitors to Enhance Stemness and Increase Tumor Risk

Gastroenterology(2023)10.1053/j.gastro.2023.07.017

N/A

0DataRank · unranked

38 citations

Bhagirath Chaurasia, Mohammed Mahidur Rahman, Vincent Kaddai, J. Alan Maschek, Jordan A. Berg +22 more

Acute activation of adipocyte lipolysis reveals dynamic lipid remodeling of the hepatic lipidome

Journal of Lipid Research(2023)10.1016/j.jlr.2023.100434

N/A

0DataRank · unranked

32 citations

Kevin J. Williams, Amandine Verlande-Ferrero, Alvin P. Chan, Gino B. Su, Erin E. Kershaw +8 more

Macrophage metabolic rewiring improves heme-suppressed efferocytosis and tissue damage in sickle cell disease

Blood(2023)10.1182/blood.2022018026

N/A

0DataRank · unranked

34 citations

Ada Antypiuk, S. Zebulon Vance, Deepa Manwani, Quentinn Pearce, James E. Cox +4 more

Weight loss increases skeletal muscle mitochondrial energy efficiency in obese mice

Life Metabolism(2023)10.1093/lifemeta/load014

N/A

0DataRank · unranked

24 citations

Marisa J. Lang, Jordan M. Johnson, Shinya Watanabe, Kelsey McLaughlin, J. Alan Maschek +7 more

Inhibition of the skeletal muscle Lands cycle ameliorates weakness induced by physical inactivity

Journal of Cachexia Sarcopenia and Muscle(2023)10.1002/jcsm.13406

N/A

0DataRank · unranked

17 citations

Hiroaki Eshima, Patrick J. Ferrara, J. Alan Maschek, James E. Cox, Micah J. Drummond +2 more

Metaboverse enables automated discovery and visualization of diverse metabolic regulatory patterns

Nature Cell Biology(2023)10.1038/s41556-023-01117-9

N/A

0DataRank · unranked

11 citations

Youjia Zhou, Yeyun Ouyang, Ahmad A. Cluntun, T. Cameron Waller, Megan E. Conway +7 more

Postnatal growth restriction impairs rat lung structure and function

The Anatomical Record(2023)10.1002/ar.25297

N/A

0DataRank · unranked

3 citations

Craig Ballard, Adrienne J. Cohen, Ben Ringham, Brooke Zhao, Haimei Wang +8 more

Inhibition of skeletal muscle Lands cycle ameliorates weakness induced by physical inactivity

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.25.550576

N/A

0DataRank · unranked

1 citations

Hiroaki Eshima, Patrick J. Ferrara, J. Alan Maschek, James E. Cox, Micah J. Drummond +2 more

Sedentary behavior in mice induces metabolic inflexibility by suppressing skeletal muscle pyruvate metabolism

Journal of Clinical Investigation(2024)10.1172/jci167371

N/A

0DataRank · unranked

28 citations

Guoshen Cao, Ahmad A. Cluntun, J. Alan Maschek, Quentinn Pearce, Marisa J. Brothwell +14 more

The phospholipids cardiolipin and phosphatidylethanolamine differentially regulate MDC biogenesis

The Journal of Cell Biology(2024)10.1083/jcb.202302069

N/A

0DataRank · unranked

14 citations

Alyssa M. English, Zachary N. Wilson, J. Alan Maschek, James E. Cox, Adam L. Hughes +1 more

Zinc-alpha-2-glycoprotein Secreted by Triple-Negative Breast Cancer Promotes Peritumoral Fibrosis

Cancer Research Communications(2024)10.1158/2767-9764.crc-24-0218

N/A

0DataRank · unranked

12 citations

Stephanie D. Giagnocavo, Meghan C. Curtin, Menusha Arumugam, Sandra M. Osburn-Staker, Guoying Wang +6 more

HAF prevents hepatocyte apoptosis and progression to MASH and HCC through transcriptional regulation of the NF-κB pathway

Hepatology(2024)10.1097/hep.0000000000001070

N/A

0DataRank · unranked

12 citations

Ethan C. Reichert, Yangsook Song Green, Lily M-T. Halberg, Martin Golkowski, Kathleen M. Maguire +17 more

Low-Iron Diet-Induced Fatty Liver Development Is Microbiota Dependent and Exacerbated by Loss of the Mitochondrial Iron Importer Mitoferrin2

Nutrients(2024)10.3390/nu16121804

N/A

0DataRank · unranked

6 citations

Rickesha Bell, Xuan Jia, Alexandra Seguin, J. Alan Maschek, Mary P. Bronner +4 more

Phospholipid isotope tracing suggests β-catenin-driven suppression of phosphatidylcholine metabolism in hepatocellular carcinoma

Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids(2024)10.1016/j.bbalip.2024.159514

N/A

0DataRank · unranked

3 citations

Hayden K. Low, Junko Kuramoto, Claire E. Stanley, Hantao Qiang, Audrey Y. Su +7 more

Semaglutide-induced weight loss improves mitochondrial energy efficiency in skeletal muscle

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.13.623431

N/A

0DataRank · unranked

3 citations

Takuya Karasawa, Cesar Meza, J. Alan Maschek, Allison M. Manuel, Linda S. Nikolova +5 more

Cardiolipin deficiency disrupts electron transport chain and drives steatohepatitis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.10.617517

N/A

0DataRank · unranked

2 citations

Guoshen Cao, J. Alan Maschek, Annelise M. Poss, Alek D. Peterlin, Liping Wang +30 more

Zinc Alpha-2-Glycoprotein (ZAG/AZGP1) secreted by triple-negative breast cancer promotes tumor microenvironment fibrosis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.04.583349

N/A

0DataRank · unranked

1 citations

Stephanie D. Giagnocavo, Meghan C. Curtin, Menusha Arumugam, Sandra M. Osburn‐Staker, Guoying Wang +6 more

Skeletal muscle PGC-1α remodels mitochondrial phospholipidome but does not alter energy efficiency for ATP synthesis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.22.595374

N/A

0DataRank · unranked

1 citations

Ran Hee Choi, Cesar Meza, J. Alan Maschek, James E. Cox, Katsuhiko Funai +1 more

HAF Prevents Hepatocyte Apoptosis and Hepatocellular Carcinoma through Transcriptional Regulation of the NF-κB pathway

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.09.574894

N/A

0DataRank · unranked

0 citations

Ethan C. Reichert, Yangsook Song Green, Lily Marie-Therese Halberg, Sydney A. McFarland, Patrice N. Mimche +10 more

Metabolite perturbations in type 1 diabetes associated with metabolic dysfunction-associated steatotic liver disease

Frontiers in Endocrinology(2025)10.3389/fendo.2025.1500242

N/A

0DataRank · unranked

5 citations

Ronald A. Merrill, Linder Wendt, Daniel J. Pape, Himani Thakkar, J. Alan Maschek +12 more

Progesterone receptor membrane component 1 (PGRMC1) regulates Heme trafficking through mitochondria-ER junctions

Journal of Inorganic Biochemistry(2025)10.1016/j.jinorgbio.2025.113093

N/A

0DataRank · unranked

1 citations

Chibuike D. Obi, Martônio Ponte Viana, Mathilda M. Willoughby, Osiris Martinez-Guzman, Aaliyah Wadley +11 more

Skeletal Muscle PGC‐1α Remodels Mitochondrial Phospholipidome but Does Not Alter Energy Efficiency for ATP Synthesis

Journal of Cachexia Sarcopenia and Muscle(2025)10.1002/jcsm.70090

N/A

0DataRank · unranked

1 citations

Ran Hee Choi, Cesar Meza, Shinya Watanabe, J. Alan Maschek, Linda S. Nikolova +3 more

Schistosoma mansoni antigen induced innate immune memory features mitochondrial biogenesis and can be inhibited by ovarian produced hormones

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.14.632838

N/A

0DataRank · unranked

2 citations

Diana Cortés‐Selva, Marco Marchetti, Lauren A. Gordon, Lisa Gibbs, J. Alan Maschek +5 more

Docosahexaenoic Acid Supplementation in Postnatal Growth Restricted Rats Does Not Normalize Lung Function or PPARγ Activity

Biomolecules(2025)10.3390/biom15040551

N/A

0DataRank · unranked

0 citations

Wesley R. Chidester, Daniel T. Wray, Nicolette Jessen, Aimee Jones, Cheylah Bitsui +6 more

Lean breast adipocytes secrete an oxylipin that suppresses breast cancer via ferroptosis

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.17.665258

N/A

0DataRank · unranked

0 citations

Abigail E. Jackson, Elisabeth A. Brown, J. Alan Maschek, David H. Lum, James E. Cox +3 more

Characterizing plasma lipid species in metabolic dysfunction associated steatotic liver disease in persons with type 1 diabetes

Scientific Reports(2025)10.1038/s41598-025-15778-z

N/A

0DataRank · unranked

0 citations

Himani Thakkar, J. Alan Maschek, James E. Cox, Scott A. Summers, Diana Jalal +4 more

Protocol for cell-specific RNA expression profiling and lipidomics analyses of Drosophila melanogaster intestinal progenitor cells

STAR Protocols(2025)10.1016/j.xpro.2025.104188

N/A

0DataRank · unranked

0 citations

A. Waseem Malick, Arash Mohammadi Matak, J. Alan Maschek, Xiaoyu Kang, James E. Cox +3 more

Iron Chaperone Poly rC Binding Protein 1 Protects Mouse Liver From Lipid Peroxidation and Steatosis

Hepatology(2020)10.1002/hep.31328

N/A

0DataRank · unranked

177 citations

Ethan Baratz, Shyamalagauri Jadhav, Feng‐Min Li, Minoo Shakoury‐Elizeh, Oksana Gavrilova +11 more

Conserved lipid metabolic reprogramming confers hypoxic and aging resilience

EMBO Reports(2025)10.1038/s44319-025-00664-6

N/A

0DataRank · unranked

0 citations

Gonçalo Vale, Quentinn Pearce, Kaitlyn Kong, Wenbin Zhou, Jeffrey G. McDonald +4 more

Mitochondrial pyruvate carriers are required for myocardial stress adaptation

Nature Metabolism(2020)10.1038/s42255-020-00288-1

N/A

0DataRank · unranked

143 citations

Paul Taufalele, Jesse D. Cochran, Isabelle Robillard‐Frayne, Jonas Marx, Jamie Soto +25 more

The pyruvate-lactate axis modulates cardiac hypertrophy and heart failure

Cell Metabolism(2020)10.1016/j.cmet.2020.12.003

N/A

0DataRank · unranked

342 citations

Rachit Badolia, Sandra Lettlová, K. Mark Parnell, Thirupura S. Shankar, Nikolaos Diakos +22 more

Ceramides are necessary and sufficient for diet-induced impairment of thermogenic adipocytes

Molecular Metabolism(2020)10.1016/j.molmet.2020.101145

N/A

0DataRank · unranked

51 citations

Ying Li, Chad Lamar Talbot, J. Alan Maschek, James E. Cox, Edward H. Schuchman +4 more

QSRR Automator: A Tool for Automating Retention Time Prediction in Lipidomics and Metabolomics

Metabolites(2020)10.3390/metabo10060237

N/A

0DataRank · unranked

53 citations

J. Leon Catrow, J. Alan Maschek, James E. Cox, Bradley C. Naylor

Maternal Tobacco Smoke Exposure Causes Sex-Divergent Changes in Placental Lipid Metabolism in the Rat

Reproductive Sciences(2020)10.1007/s43032-019-00065-w

N/A

0DataRank · unranked

13 citations

Haimei Wang, Jessica Comstock, Purneet Singh, Zhengming Wang, Brent A. Locklear +6 more

Network-aware reaction pattern recognition reveals regulatory signatures of mitochondrial dysfunction

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.25.171850

N/A

0DataRank · unranked

6 citations

Youjia Zhou, Yeyun Ouyang, T. Cameron Waller, Ahmad A. Cluntun, Megan E. Conway +7 more