🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Samuel L. Neff

Princeton University

ORCID: 0000-0002-5993-8445

Also affiliated with Ludwig Cancer Research

Biochemistry, Genetics and Molecular BiologyEnvironmental ScienceMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.5Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

GAUGE-Annotated Microbial Transcriptomic Data Facilitate Parallel Mining and High-Throughput Reanalysis To Form Data-Driven Hypotheses

mSystems(2021)10.1128/msystems.01305-20
Top 42%
0.446DataRank
Top 42%18 citations

Katja Koeppen, Victoria Holden, Samuel L. Neff, Liviu Cengher, Elora G. Demers +4 more

Papers

Driven by 12 papers — median percentile 51. Top paper: “Compendium-Wide Analysis of Pseudomonas aeruginosa Core and Accessory Genes Reveals Transcriptional Patterns across Strains PAO1 and PA14”.

Compendium-Wide Analysis of Pseudomonas aeruginosa Core and Accessory Genes Reveals Transcriptional Patterns across Strains PAO1 and PA14

mSystems(2022)10.1128/msystems.00342-22
N/A
0.457DataRank · unranked
10 citations

Georgia Doing, Samuel L. Neff, Taylor Reiter, Deborah A. Hogan, Casey S. Greene +1 more

GAUGE-Annotated Microbial Transcriptomic Data Facilitate Parallel Mining and High-Throughput Reanalysis To Form Data-Driven Hypotheses

mSystems(2021)10.1128/msystems.01305-20
Top 42%
0.446DataRank
Top 42%18 citations

Katja Koeppen, Victoria Holden, Samuel L. Neff, Liviu Cengher, Elora G. Demers +4 more

Pseudomonas aeruginosa transcriptome analysis of metal restriction in ex vivo cystic fibrosis sputum

Microbiology Spectrum(2024)10.1128/spectrum.03157-23
N/A
0.417DataRank · unranked
10 citations

Georgia Doing, Taylor Reiter, Thomas H. Hampton, Casey S. Greene, Deborah A. Hogan +1 more

CF-Seq, an accessible web application for rapid re-analysis of cystic fibrosis pathogen RNA sequencing studies

Scientific Data(2022)10.1038/s41597-022-01431-1
Top 47%
0.385DataRank
Top 47%12 citations

Thomas H. Hampton, Charles Puerner, Liviu Cengher, Georgia Doing, Alexandra J. Lee +6 more

Computationally Efficient Assembly of Pseudomonas aeruginosa Gene Expression Compendia

mSystems(2023)10.1128/msystems.00341-22
Top 51%
0.342DataRank
Top 51%6 citations

Alexandra J. Lee, Samuel L. Neff, Taylor Reiter, Jacob D. Holt, BRUCE A. STANTON +3 more

Computationally efficient assembly of a Pseudomonas aeruginos a gene expression compendium

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.24.477642
Top 54%
0.310DataRank
Top 54%5 citations

Alexandra J. Lee, Samuel L. Neff, Jacob D. Holt, BRUCE A. STANTON, Casey S. Greene +2 more

Compendium-wide analysis of P. aeruginosa core and accessory genes reveal more nuanced transcriptional patterns

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.14.488429
N/A
0.165DataRank · unranked
2 citations

Georgia Doing, Samuel L. Neff, Taylor Reiter, Deborah A. Hogan, Casey S. Greene +1 more

Analysis of Pseudomonas aeruginosa transcription in an ex vivo cystic fibrosis sputum model identifies metal restriction as a gene expression stimulus

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.21.554169
N/A
0DataRank · unranked
0 citations

Georgia Doing, Taylor Reiter, Thomas H. Hampton, Casey S. Greene, Deborah A. Hogan +1 more

Rocket-miR, a translational launchpad for miRNA-based antimicrobial drug development

mSystems(2023)10.1128/msystems.00653-23
N/A
0DataRank · unranked
9 citations

Thomas H. Hampton, Katja Koeppen, Sharanya Sarkar, Casey J. Latario, Benjamin D. Ross +2 more

Rocket-miR, a Translational Launchpad for miRNA-based Antimicrobial Drug Development

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.22.546111
N/A
0DataRank · unranked
1 citations

Thomas H. Hampton, Katja Koeppen, Sharanya Sarkar, Casey J. Latario, Benjamin D. Ross +2 more

E.PathDash, pathway activation analysis of publicly available pathogen gene expression data

mSystems(2024)10.1128/msystems.01030-24
N/A
0DataRank · unranked
1 citations

Thomas H. Hampton, Sharanya Sarkar, Georgia Doing, Samuel L. Neff, Carson Finger +3 more

Acute respiratory distress vs healthy lung environments differently affect mesenchymal stromal cell extracellular vesicle miRNAs

Cytotherapy(2025)10.1016/j.jcyt.2025.01.006
N/A
0DataRank · unranked
3 citations

Irakli Dzneladze, Thomas H. Hampton, Samuel L. Neff, Lori Asarian, Jayita Barua +16 more