🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Renming Liu

Sun Yat-sen University

ORCID: 0000-0002-6025-6492

Also affiliated with Third Affiliated Hospital of Sun Yat-sen University, Carnegie Mellon University, Michigan State University

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.2Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

DANCE: a deep learning library and benchmark platform for single-cell analysis

Genome biology(2024)10.1186/s13059-024-03211-z
Top 34%
0.584DataRank
Top 34%11 citations

Renming Liu, Hongzhi Wen, Wenzhuo Tang, Zhaoheng Li, Julian Venegas +11 more

Papers

Driven by 13 papers — median percentile 58. Top paper: “Accurately modeling biased random walks on weighted networks using node2vec+”.

Accurately modeling biased random walks on weighted networks using node2vec+

Bioinformatics(2023)10.1093/bioinformatics/btad047
N/A
1.0DataRank · unranked
34 citations

Matthew Hirn, Krishnan, Arjun, Renming Liu

DANCE: a deep learning library and benchmark platform for single-cell analysis

Genome biology(2024)10.1186/s13059-024-03211-z
Top 34%
0.584DataRank
Top 34%11 citations

Renming Liu, Hongzhi Wen, Wenzhuo Tang, Zhaoheng Li, Julian Venegas +11 more

Deep Learning in Single-cell Analysis

ACM Transactions on Intelligent Systems and Technology(2024)10.1145/3641284
N/A
0.477DataRank · unranked
23 citations

Jiayuan Ding, Wenzhuo Tang, Zhaoheng Li, Hongzhi Wen, Yixin Wang +10 more

GenePlexus: a web-server for gene discovery using network-based machine learning

Nucleic Acids Research(2022)10.1093/nar/gkac335
Top 42%
0.448DataRank
Top 42%9 citations

Patrick Bills, Douglas Krum, Jacob Newsted, Renming Liu, Krishnan, Arjun +1 more

Joint representation of molecular networks from multiple species improves gene classification

PLoS Computational Biology(2024)10.1371/journal.pcbi.1011773
N/A
0.410DataRank · unranked
8 citations

Kayla A Johnson, Renming Liu, Krishnan, Arjun, Christopher A Mancuso

PyGenePlexus: A Python package for gene discovery using network-based machine learning

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.02.498552
N/A
0.165DataRank · unranked
2 citations

Renming Liu, Krishnan, Arjun, Christopher A Mancuso

Open Biomedical Network Benchmark A Python Toolkit for Benchmarking Datasets with Biomedical Networks

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.10.523485
Top 71%
0.128DataRank
Top 71%1 citations

Krishnan, Arjun, Renming Liu

PecanPy: a fast, efficient, and parallelized Python implementation of node2vec

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.23.218487
N/A
0.121DataRank · unranked
1 citations

Krishnan, Arjun, Renming Liu

PyGenePlexus: a Python package for gene discovery using network-based machine learning

Bioinformatics(2023)10.1093/bioinformatics/btad064
N/A
0DataRank · unranked
7 citations

Renming Liu, Krishnan, Arjun, Christopher A Mancuso

Joint representation of molecular networks from multiple species improves gene classification

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.02.539152
N/A
0DataRank · unranked
0 citations

Kayla A Johnson, Renming Liu, Krishnan, Arjun, Christopher A Mancuso

Single-Cell Multimodal Prediction via Transformers

PubMed(2023)10.1145/3583780.3615061
N/A
0DataRank · unranked
21 citations

Hongzhi Wen, Renming Liu, Jiayuan Ding, Wei Jin, Yuying Xie +3 more

Accurately modeling biased random walks on weighted networks using node2vec+

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.14.503926
N/A
0DataRank · unranked
5 citations

Matthew Hirn, Krishnan, Arjun, Renming Liu

PecanPy: a fast, efficient and parallelized Python implementation of node2vec

Bioinformatics(2021)10.1093/bioinformatics/btab202
N/A
0DataRank · unranked
60 citations

Krishnan, Arjun, Renming Liu