Matthew D. Brooks

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 9 papers. Top paper: “Nitrogen sensing and regulatory networks: it's about time and space”.

Nitrogen sensing and regulatory networks: it's about time and space

The Plant Cell(2024)10.1093/plcell/koae038

N/A

0.557DataRank · unranked

40 citations

Karin Rothkegel, Matthew D. Brooks, Chia‐Yi Cheng, José M. Álvarez, Sandrine Ruffel +4 more

OutPredict: multiple datasets can improve prediction of expression and inference of causality

Scientific Reports(2020)10.1038/s41598-020-63347-3

N/A

0.470DataRank · unranked

22 citations

Matthew D. Brooks, Richard Bonneau, Gloria M. Coruzzi, Dennis Shasha, Jacopo Cirrone

ConnecTF: A platform to build gene networks by integrating transcription factor-target gene interactions

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.07.191627

N/A

0DataRank · unranked

2 citations

Che-Lun Juang, Manpreet S. Katari, José M. Álvarez, Angelo Pasquino, H.-J. Shih +5 more

Author Correction: OutPredict: multiple datasets can improve prediction of expression and inference of causality

Scientific Reports(2020)10.1038/s41598-020-69883-2

N/A

0DataRank · unranked

1 citations

Matthew D. Brooks, Richard Bonneau, Gloria M. Coruzzi, Dennis Shasha, Jacopo Cirrone

Time-Based Systems Biology Approaches to Capture and Model Dynamic Gene Regulatory Networks

Annual Review of Plant Biology(2021)10.1146/annurev-arplant-081320-090914

N/A

0DataRank · unranked

44 citations

Matthew D. Brooks, Joseph Swift, Gloria M. Coruzzi, José M. Álvarez

Validation of a high-confidence regulatory network for gene-to-NUE phenotype in field-grown rice

Frontiers in Plant Science(2022)10.3389/fpls.2022.1006044

N/A

0DataRank · unranked

14 citations

Ji Huang, Chia‐Yi Cheng, Hung-Jui S. Shih, Matthew D. Brooks, José M. Álvarez +5 more

Transient genome-wide interactions of the master transcription factor NLP7 initiate a rapid nitrogen-response cascade

Nature Communications(2020)10.1038/s41467-020-14979-6

N/A

0DataRank · unranked

170 citations

Anna-Lena M. Schinke, Matthew D. Brooks, Angelo Pasquino, Lauriebeth Leonelli, Kranthi Varala +5 more

Shining light on Arabidopsis regulatory networks integrating nitrogen use and photosynthesis

The Plant Journal(2025)10.1111/tpj.70211

N/A

0DataRank · unranked

5 citations

Camila Trindade Coelho, Jenny Gao, Matthew D. Brooks, Kithmee K. de Silva

ConnecTF: A platform to integrate transcription factor–gene interactions and validate regulatory networks

PLANT PHYSIOLOGY(2020)10.1093/plphys/kiaa012

N/A

0DataRank · unranked

60 citations

Che-Lun Juang, Manpreet S. Katari, José M. Álvarez, Angelo Pasquino, Hung-Jui Shih +5 more