🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Melanie Pham

Baylor College of Medicine

ORCID: 0000-0002-6083-271X

Also affiliated with Center for Theoretical Biological Physics, The University of Texas Medical Branch at Galveston, Rice University

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological SciencesBusiness, Management and Accounting

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
2.2Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement

Journal of Advanced Research(2021)10.1016/j.jare.2021.10.009
Top 16%
1.3DataRank
Top 16%71 citations

Olga Dudchenko, Jinpeng Wang, Aamir W. Khan, Saurabh Gupta, Parwinder Kaur +41 more

Papers

Driven by 10 papers — median percentile 70. Top paper: “Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement”.

Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement

Journal of Advanced Research(2021)10.1016/j.jare.2021.10.009
Top 16%
1.3DataRank
Top 16%71 citations

Olga Dudchenko, Jinpeng Wang, Aamir W. Khan, Saurabh Gupta, Parwinder Kaur +41 more

A chromosome-length genome assembly and annotation of blackberry ( Rubus argutus , cv. “Hillquist”)

G3 Genes Genomes Genetics(2022)10.1093/g3journal/jkac289
Top 30%
0.674DataRank
Top 30%31 citations

Rishi Aryal, Olga Dudchenko, Daniel James Sargent, Daniel G. Mead, Matteo Buti +21 more

A chromosome-length genome assembly and annotation of blackberry ( Rubus argutus , cv. ‘Hillquist’)

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.28.489789
Top 62%
0.222DataRank
Top 62%3 citations

Rishi Aryal, Olga Dudchenko, Daniel James Sargent, Daniel G. Mead, Matteo Buti +21 more

Convergent selection on hormone signaling shaped social evolution in bees

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.14.439731
N/A
0DataRank · unranked
2 citations

Benjamin E. R. Rubin, Olga Dudchenko, Callum J. Kingwell, Ian M. Traniello, Z. Yan Wang +24 more

Chromatin alternates between A and B compartments at kilobase scale for subgenic organization

Nature Communications(2023)10.1038/s41467-023-38429-1
N/A
0DataRank · unranked
156 citations

Huiya Gu, Moshe Olshansky, Ailun Wang, Irene Farabella, Yossi Eliaz +25 more

Convergent and complementary selection shaped gains and losses of eusociality in sweat bees

Nature Ecology & Evolution(2023)10.1038/s41559-023-02001-3
N/A
0DataRank · unranked
52 citations

Benjamin E. R. Rubin, Olga Dudchenko, Callum J. Kingwell, Ian M. Traniello, Z. Yan Wang +24 more

3D genomics across the tree of life reveals condensin II as a determinant of architecture type

Science(2021)10.1126/science.abe2218
N/A
0DataRank · unranked
302 citations

Olga Dudchenko, Ahmed M.O. Elbatsh, Sumitabha Brahmachari, Jonne A. Raaijmakers, Tom van Schaik +59 more

The control of prickle formation in Rubus

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.22.695586
N/A
0DataRank · unranked
2 citations

Tom Poorten, Andrew S. Fister, Cherie Ochsenfeld, Joel Reiner, Allie Sandra Castillo +23 more

Delineating the Tnt1 Insertion Landscape of the Model Legume Medicago truncatula cv. R108 at the Hi-C Resolution Using a Chromosome-Length Genome Assembly

International Journal of Molecular Sciences(2021)10.3390/ijms22094326
N/A
0DataRank · unranked
29 citations

Christopher Lui, Olga Dudchenko, Raja Sekhar Nandety, Bhavna Hurgobin, Melanie Pham +4 more

Fine-mapping of nuclear compartments using ultra-deep Hi-C shows that active promoter and enhancer elements localize in the active A compartment even when adjacent sequences do not

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.03.462599
N/A
0DataRank · unranked
29 citations

Hannah L. Harris, Moshe Olshansky, Yossi Eliaz, Akshay Krishna, Achyuth Kalluchi +20 more