Dominik J. Otto

Cape Town HVTN Immunology Laboratory / Hutchinson Centre Research Institute of South Africa

Also affiliated with Fred Hutch Cancer Center

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 11 papers. Top paper: “Defining and benchmarking open problems in single-cell analysis”.

Defining and benchmarking open problems in single-cell analysis

Nature Biotechnology(2025)10.1038/s41587-025-02694-w

N/A

0.937DataRank · unranked

29 citations

Scott Gigante, Daniel B. Burkhardt, Robrecht Cannoodt, Nikolay S. Markov, Luke Zappia +48 more

Community assessment of methods to deconvolve cellular composition from bulk gene expression

Nature Communications(2024)10.1038/s41467-024-50618-0

N/A

0.867DataRank · unranked

34 citations

Aurélien de Reyniès, Aaron M. Newman, Joshua J. Waterfall, Andrew Lamb, Florent Petitprez +63 more

Defining and benchmarking open problems in single-cell analysis

Research Square(2024)10.21203/rs.3.rs-4181617/v1

N/A

0.603DataRank · unranked

17 citations

Scott Gigante, Daniel B. Burkhardt, Robrecht Cannoodt, Daniel Strobl, Nikolay S. Markov +45 more

MLL oncoprotein levels influence leukemia lineage identities

Nature Communications(2024)10.1038/s41467-024-53399-8

N/A

0.418DataRank · unranked

9 citations

M. Durán, Dominik J. Otto, Weifang Wu, Joanna S. Yi, Danielle Kirkey +6 more

KMT2A oncoproteins induce epigenetic resistance to targeted therapies

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.29.573681

N/A

0DataRank · unranked

6 citations

Melodie Duran, Dominik J. Otto, Weifang Wu, Joanna S. Yi, Danielle Kirkey +6 more

Quantifying cell-state densities in single-cell phenotypic landscapes using Mellon

Nature Methods(2024)10.1038/s41592-024-02302-w

N/A

0DataRank · unranked

36 citations

C. Diana Jordan, Brennan Dury, Christine Dien, Manu Setty, Dominik J. Otto

Comparing phenotypic manifolds with Kompot: Detecting differential abundance and gene expression at single-cell resolution

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.03.657769

N/A

0DataRank · unranked

0 citations

Erica Arriaga-Gomez, Elana Thieme, Ruijin Yang, Stanley Chun-Wei Lee, Manu Setty +1 more

Multi-omics analysis reveals CLEC2A is a leukemia-restricted CART target in KMT2A-rearranged Acute Myeloid Leukemia

Research Square(2025)10.21203/rs.3.rs-7768680/v1

N/A

0DataRank · unranked

0 citations

Derek H. Janssens, Margaret G. Hines, Seungmin Shin, Grace Hawkins, Melia Blankenfeld +26 more

Simultaneous CUT&Tag profiling of the accessible and silenced regulome in single cells

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.19.473377

N/A

0DataRank · unranked

1 citations

Dominik J. Otto, Michael P. Meers, Manu Setty, Kami Ahmad, Steven Henikoff +1 more

CUT&Tag2for1: a modified method for simultaneous profiling of the accessible and silenced regulome in single cells

Genome biology(2022)10.1186/s13059-022-02642-w

N/A

0DataRank · unranked

64 citations

Dominik J. Otto, Michael P. Meers, Manu Setty, Kami Ahmad, Steven Henikoff +1 more

Quantifying Cell-State Densities in Single-Cell Phenotypic Landscapes using Mellon

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.09.548272

N/A

0DataRank · unranked

7 citations

C. Diana Jordan, Brennan Dury, Christine Dien, Manu Setty, Dominik J. Otto